© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1699.t1 |
| Gene name | |
| Location | scaffold_02:628353..631157 |
| Strand | - |
| Gene length (bp) | 2804 |
| Transcript length (bp) | 2688 |
| Coding sequence length (bp) | 2688 |
| Protein length (aa) | 896 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00884 | Sulfatase | Sulfatase | 1.7E-19 | 459 | 735 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008484 | sulfuric ester hydrolase activity | Yes |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 36 | 55 | 19 |
| 2 | 65 | 87 | 22 |
| 3 | 94 | 116 | 22 |
| 4 | 141 | 163 | 22 |
| 5 | 165 | 184 | 19 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 98.37 | 59.13 | 137.61 |
| 5d_25C | Five days - 25 degrees Celsius | 87.93 | 53.31 | 122.55 |
| 7d_25C | Seven days - 25 degrees Celsius | 79.59 | 47.96 | 111.22 |
| 10d_25C | Ten days - 25 degrees Celsius | 102.06 | 61.15 | 142.97 |
| 7d_15C | Seven days - 15 degrees Celsius | 74.00 | 44.60 | 103.40 |
| 7d_30C | Seven days - 30 degrees Celsius | 98.09 | 59.13 | 137.06 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.687148 | no |
| 3d_25C | 7d_25C | 0.388593 | no |
| 3d_25C | 7d_15C | 0.211194 | no |
| 3d_25C | 7d_30C | 0.993796 | no |
| 3d_25C | 10d_25C | 0.913002 | no |
| 5d_25C | 7d_25C | 0.727905 | no |
| 5d_25C | 7d_15C | 0.495223 | no |
| 5d_25C | 7d_30C | 0.701277 | no |
| 5d_25C | 10d_25C | 0.568582 | no |
| 7d_25C | 7d_15C | 0.817255 | no |
| 7d_25C | 7d_30C | 0.404198 | no |
| 7d_25C | 10d_25C | 0.291041 | no |
| 7d_15C | 7d_30C | 0.225566 | no |
| 7d_15C | 10d_25C | 0.146877 | no |
| 7d_30C | 10d_25C | 0.907734 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1699.t1 MKVVHAVHAYLSHGIRRVRLSPGETLDAVWDFARRYFFTLAVLSLFSAKLLHLYAHIYSLPLPRLFLWGLTFFFQ DVMLLLLFRILAQKVAWRPGAALLAILVIPSSLIVSFMAAANTSFYVFTGAEIHWRQAKSFNGDAAAIHTLLTGL TGFLIVEAILLTISLFAAHSIHAISGGILHVWAWPVRWLFGRLRPHVEPLVQRFWPRSKSSVADLPDPRIYEQIA MDDNDDLSDNEEGDHLLNTARLPNRLPASKRVTDGVPQRALVLGLFSLFLLLRFMRPWDPVYMYMSTTLPLTTII EGAERQSPVDTAGTPFRFEYLDRITALGPAPQWTWMSKEPLEGFEDWDQSDPLALHYDPHGDPLHISNLDKPVLQ EIHNALASGDVKIKHVVFLKLESARADIFPLQKDSFMYKRIAETWKNKTIPQEVVERLANLTRTAEFLTNFPTGF EHDDTRFGRKAYGGISAKDAITSSTYTLKSLTGSFCGVTPLVADFNREFEHHIYQPCLPQVFDTLSQQPDINSET DDFTKWPWHSTFMMSVTEMYDNQFKLTPHLGFRDKQTKETIIKPDAKHFPVKSAEVNYYGYPETELREYIRDAID DAERDHQRLFLTHLTSTTHHPWGIPNDAFEEMMGAKSGANGDMNRYLNSVGYVDDWLSELIDILEEKGVANETLF VMAGDHGLSLPNDGGITPYDNPHVGSFKVPIVIAHPLLPPVQIDTPVISTQIVPTIIDLLIESASLSQDSTRAAR DIRSLYEGQSMIRPQVVKQDGREAWHFTVMNTGGSWLSVRSAARPEFRLVIPLVNDVEWRFTDVSKDPNELSPIE RFSLADLASAVQDEYEDEEIMNWLYHAAYVTNWWVLENWDRWRFSPKAKDEAKEEPPKEEPKEEPKEDKT* |
| Coding | >Pro_DTO377G3_2|g1699.t1 ATGAAAGTCGTTCACGCTGTTCATGCTTATTTAAGCCACGGCATCCGGCGTGTTCGTCTCTCGCCTGGTGAGACC CTGGATGCCGTCTGGGACTTTGCCCGTCGCTACTTTTTCACCCTGGCCGTTCTCTCGTTATTCAGTGCCAAATTG CTCCATCTCTACGCTCATATATATTCTCTACCCCTGCCGCGACTATTCCTATGGGGTCTCACCTTCTTTTTCCAG GATGTGATGCTGCTATTGCTGTTTCGCATTCTGGCCCAGAAGGTCGCGTGGCGACCGGGAGCCGCTCTGCTCGCT ATCTTGGTTATCCCGTCTAGTCTCATCGTCTCCTTCATGGCCGCCGCCAATACCTCCTTCTACGTTTTCACAGGT GCCGAGATCCACTGGCGCCAAGCCAAATCCTTCAATGGTGATGCCGCTGCCATTCACACCCTCCTGACCGGTCTG ACCGGATTTCTGATCGTCGAGGCCATCCTCCTCACAATCTCATTGTTCGCTGCCCATTCCATCCATGCCATCTCG GGCGGCATCCTGCATGTCTGGGCCTGGCCCGTTCGGTGGCTGTTTGGTCGTCTGCGCCCACACGTGGAGCCCCTG GTGCAGCGCTTCTGGCCCCGATCTAAATCGTCAGTCGCCGACCTGCCCGATCCTCGAATCTACGAACAAATCGCC ATGGATGACAACGATGATCTCAGCGATAACGAAGAAGGGGATCATCTGTTGAACACCGCTCGCCTACCCAACCGT CTCCCCGCCTCCAAGCGAGTCACCGACGGTGTACCTCAACGGGCCCTCGTCCTGGGATTGTTCAGTCTCTTCCTC TTACTCCGCTTTATGCGACCGTGGGACCCGGTCTATATGTACATGTCCACCACCTTGCCTTTGACCACCATCATT GAGGGTGCGGAGCGTCAATCCCCCGTCGATACCGCTGGCACACCCTTCCGCTTTGAGTATCTGGATAGGATCACT GCATTGGGCCCCGCACCTCAATGGACCTGGATGTCCAAGGAACCGCTCGAAGGTTTCGAGGACTGGGATCAATCC GACCCCTTGGCGCTGCACTACGACCCGCATGGGGACCCATTGCACATCTCCAACCTCGACAAGCCGGTGCTGCAG GAGATTCACAACGCACTAGCCAGCGGCGATGTGAAGATCAAGCATGTCGTATTCTTGAAACTCGAGAGTGCACGT GCCGATATCTTCCCTCTGCAAAAGGACAGCTTCATGTACAAACGCATTGCGGAAACCTGGAAGAACAAGACCATT CCCCAAGAGGTTGTGGAACGCCTTGCCAACCTCACCCGGACTGCCGAGTTCTTGACCAACTTCCCCACCGGCTTT GAGCACGACGATACCCGTTTCGGCCGCAAGGCGTATGGTGGTATCAGTGCCAAGGATGCCATCACTTCCTCCACC TATACTCTCAAGAGTTTGACGGGAAGTTTCTGTGGTGTGACCCCACTGGTCGCCGATTTCAACCGCGAATTCGAA CACCATATCTACCAGCCATGTCTGCCCCAGGTCTTCGACACGTTGAGTCAGCAACCGGATATCAACAGTGAGACC GACGACTTCACCAAGTGGCCGTGGCATTCGACCTTTATGATGTCGGTCACCGAAATGTACGACAATCAGTTCAAG TTGACTCCGCACTTGGGATTCCGCGATAAACAGACAAAAGAGACGATCATCAAGCCCGATGCCAAGCATTTCCCG GTTAAAAGTGCCGAGGTGAACTACTATGGCTATCCGGAGACTGAGCTTCGAGAGTACATCCGTGATGCTATTGAT GATGCGGAACGTGACCACCAGCGTCTCTTCCTCACCCACCTCACGAGTACCACCCATCATCCTTGGGGAATTCCG AACGACGCCTTTGAAGAAATGATGGGCGCCAAATCCGGTGCGAACGGCGATATGAATCGATACCTGAACTCCGTC GGTTATGTCGATGATTGGCTCTCGGAGCTCATCGATATCCTGGAGGAGAAGGGAGTCGCTAATGAGACCTTGTTC GTCATGGCTGGCGATCACGGCCTTTCCCTCCCCAACGACGGCGGTATCACTCCCTATGACAACCCCCACGTCGGC AGCTTCAAGGTGCCGATCGTGATTGCACACCCGCTCCTTCCTCCCGTCCAGATCGACACCCCAGTCATCAGCACC CAGATCGTCCCCACCATCATCGACTTGTTGATCGAGTCGGCATCCCTCAGCCAGGACAGCACGCGTGCCGCACGC GACATTCGCTCGCTGTACGAAGGTCAATCTATGATCCGACCGCAGGTCGTCAAGCAGGACGGACGCGAAGCCTGG CACTTCACAGTCATGAACACTGGTGGTTCATGGCTCTCTGTTCGGTCGGCCGCCCGTCCCGAGTTCCGCCTAGTG ATCCCGCTAGTCAACGACGTGGAATGGCGCTTCACTGATGTGTCCAAGGACCCGAACGAGCTGAGCCCGATCGAG CGCTTCAGCCTTGCCGATCTCGCGTCCGCGGTCCAGGACGAGTATGAGGATGAAGAAATCATGAACTGGCTCTAC CATGCAGCCTACGTCACCAACTGGTGGGTGCTGGAGAACTGGGACCGATGGAGATTCTCCCCAAAAGCCAAAGAC GAGGCGAAAGAAGAGCCTCCTAAAGAAGAGCCCAAAGAGGAGCCCAAGGAAGACAAAACCTAA |
| Transcript | >Pro_DTO377G3_2|g1699.t1 ATGAAAGTCGTTCACGCTGTTCATGCTTATTTAAGCCACGGCATCCGGCGTGTTCGTCTCTCGCCTGGTGAGACC CTGGATGCCGTCTGGGACTTTGCCCGTCGCTACTTTTTCACCCTGGCCGTTCTCTCGTTATTCAGTGCCAAATTG CTCCATCTCTACGCTCATATATATTCTCTACCCCTGCCGCGACTATTCCTATGGGGTCTCACCTTCTTTTTCCAG GATGTGATGCTGCTATTGCTGTTTCGCATTCTGGCCCAGAAGGTCGCGTGGCGACCGGGAGCCGCTCTGCTCGCT ATCTTGGTTATCCCGTCTAGTCTCATCGTCTCCTTCATGGCCGCCGCCAATACCTCCTTCTACGTTTTCACAGGT GCCGAGATCCACTGGCGCCAAGCCAAATCCTTCAATGGTGATGCCGCTGCCATTCACACCCTCCTGACCGGTCTG ACCGGATTTCTGATCGTCGAGGCCATCCTCCTCACAATCTCATTGTTCGCTGCCCATTCCATCCATGCCATCTCG GGCGGCATCCTGCATGTCTGGGCCTGGCCCGTTCGGTGGCTGTTTGGTCGTCTGCGCCCACACGTGGAGCCCCTG GTGCAGCGCTTCTGGCCCCGATCTAAATCGTCAGTCGCCGACCTGCCCGATCCTCGAATCTACGAACAAATCGCC ATGGATGACAACGATGATCTCAGCGATAACGAAGAAGGGGATCATCTGTTGAACACCGCTCGCCTACCCAACCGT CTCCCCGCCTCCAAGCGAGTCACCGACGGTGTACCTCAACGGGCCCTCGTCCTGGGATTGTTCAGTCTCTTCCTC TTACTCCGCTTTATGCGACCGTGGGACCCGGTCTATATGTACATGTCCACCACCTTGCCTTTGACCACCATCATT GAGGGTGCGGAGCGTCAATCCCCCGTCGATACCGCTGGCACACCCTTCCGCTTTGAGTATCTGGATAGGATCACT GCATTGGGCCCCGCACCTCAATGGACCTGGATGTCCAAGGAACCGCTCGAAGGTTTCGAGGACTGGGATCAATCC GACCCCTTGGCGCTGCACTACGACCCGCATGGGGACCCATTGCACATCTCCAACCTCGACAAGCCGGTGCTGCAG GAGATTCACAACGCACTAGCCAGCGGCGATGTGAAGATCAAGCATGTCGTATTCTTGAAACTCGAGAGTGCACGT GCCGATATCTTCCCTCTGCAAAAGGACAGCTTCATGTACAAACGCATTGCGGAAACCTGGAAGAACAAGACCATT CCCCAAGAGGTTGTGGAACGCCTTGCCAACCTCACCCGGACTGCCGAGTTCTTGACCAACTTCCCCACCGGCTTT GAGCACGACGATACCCGTTTCGGCCGCAAGGCGTATGGTGGTATCAGTGCCAAGGATGCCATCACTTCCTCCACC TATACTCTCAAGAGTTTGACGGGAAGTTTCTGTGGTGTGACCCCACTGGTCGCCGATTTCAACCGCGAATTCGAA CACCATATCTACCAGCCATGTCTGCCCCAGGTCTTCGACACGTTGAGTCAGCAACCGGATATCAACAGTGAGACC GACGACTTCACCAAGTGGCCGTGGCATTCGACCTTTATGATGTCGGTCACCGAAATGTACGACAATCAGTTCAAG TTGACTCCGCACTTGGGATTCCGCGATAAACAGACAAAAGAGACGATCATCAAGCCCGATGCCAAGCATTTCCCG GTTAAAAGTGCCGAGGTGAACTACTATGGCTATCCGGAGACTGAGCTTCGAGAGTACATCCGTGATGCTATTGAT GATGCGGAACGTGACCACCAGCGTCTCTTCCTCACCCACCTCACGAGTACCACCCATCATCCTTGGGGAATTCCG AACGACGCCTTTGAAGAAATGATGGGCGCCAAATCCGGTGCGAACGGCGATATGAATCGATACCTGAACTCCGTC GGTTATGTCGATGATTGGCTCTCGGAGCTCATCGATATCCTGGAGGAGAAGGGAGTCGCTAATGAGACCTTGTTC GTCATGGCTGGCGATCACGGCCTTTCCCTCCCCAACGACGGCGGTATCACTCCCTATGACAACCCCCACGTCGGC AGCTTCAAGGTGCCGATCGTGATTGCACACCCGCTCCTTCCTCCCGTCCAGATCGACACCCCAGTCATCAGCACC CAGATCGTCCCCACCATCATCGACTTGTTGATCGAGTCGGCATCCCTCAGCCAGGACAGCACGCGTGCCGCACGC GACATTCGCTCGCTGTACGAAGGTCAATCTATGATCCGACCGCAGGTCGTCAAGCAGGACGGACGCGAAGCCTGG CACTTCACAGTCATGAACACTGGTGGTTCATGGCTCTCTGTTCGGTCGGCCGCCCGTCCCGAGTTCCGCCTAGTG ATCCCGCTAGTCAACGACGTGGAATGGCGCTTCACTGATGTGTCCAAGGACCCGAACGAGCTGAGCCCGATCGAG CGCTTCAGCCTTGCCGATCTCGCGTCCGCGGTCCAGGACGAGTATGAGGATGAAGAAATCATGAACTGGCTCTAC CATGCAGCCTACGTCACCAACTGGTGGGTGCTGGAGAACTGGGACCGATGGAGATTCTCCCCAAAAGCCAAAGAC GAGGCGAAAGAAGAGCCTCCTAAAGAAGAGCCCAAAGAGGAGCCCAAGGAAGACAAAACCTAA |
| Gene | >Pro_DTO377G3_2|g1699.t1 ATGAAAGTCGTTCACGCTGTTCATGCTTATTTAAGCCACGGCATCCGGCGTGTTCGTCTCTCGCCTGGTGAGACC CTGGATGCCGTCTGGGACTTTGCCCGTCGCTACTTTTTCACCCTGGCCGTTCTCTCGTTATTCAGTGCCAAATTG CTCCATCTCTACGCTCATATATATTCTCTACCCCTGCCGCGACTATTCCTATGGGGTCTCACCTTCTTTTTCCAG GATGTGATGCTGCTATTGCTGTTTCGCATTCTGGCCCAGAAGGTCGCGTGGCGACCGGGAGCCGCTCTGCTCGCT ATCTTGGTTATCCCGTCTAGGTAAGTGTCCACGTGCCCCTTTTTCCACTGCATTGCTACATTCTTTCGGGTCTTT TTCAATAGATTTAGACTTGATCTGAATACAATTAATTAATCTCGTCACTAACAATATGCAGTCTCATCGTCTCCT TCATGGCCGCCGCCAATACCTCCTTCTACGTTTTCACAGGTGCCGAGATCCACTGGCGCCAAGCCAAATCCTTCA ATGGTGATGCCGCTGCCATTCACACCCTCCTGACCGGTCTGACCGGATTTCTGATCGTCGAGGCCATCCTCCTCA CAATCTCATTGTTCGCTGCCCATTCCATCCATGCCATCTCGGGCGGCATCCTGCATGTCTGGGCCTGGCCCGTTC GGTGGCTGTTTGGTCGTCTGCGCCCACACGTGGAGCCCCTGGTGCAGCGCTTCTGGCCCCGATCTAAATCGTCAG TCGCCGACCTGCCCGATCCTCGAATCTACGAACAAATCGCCATGGATGACAACGATGATCTCAGCGATAACGAAG AAGGGGATCATCTGTTGAACACCGCTCGCCTACCCAACCGTCTCCCCGCCTCCAAGCGAGTCACCGACGGTGTAC CTCAACGGGCCCTCGTCCTGGGATTGTTCAGTCTCTTCCTCTTACTCCGCTTTATGCGACCGTGGGACCCGGTCT ATATGTACATGTCCACCACCTTGCCTTTGACCACCATCATTGAGGGTGCGGAGCGTCAATCCCCCGTCGATACCG CTGGCACACCCTTCCGCTTTGAGTATCTGGATAGGATCACTGCATTGGGCCCCGCACCTCAATGGACCTGGATGT CCAAGGAACCGCTCGAAGGTTTCGAGGACTGGGATCAATCCGACCCCTTGGCGCTGCACTACGACCCGCATGGGG ACCCATTGCACATCTCCAACCTCGACAAGCCGGTGCTGCAGGAGATTCACAACGCACTAGCCAGCGGCGATGTGA AGATCAAGCATGTCGTATTCTTGAAACTCGAGAGTGCACGTGCCGATATCTTCCCTCTGCAAAAGGACAGCTTCA TGTACAAACGCATTGCGGAAACCTGGAAGAACAAGACCATTCCCCAAGAGGTTGTGGAACGCCTTGCCAACCTCA CCCGGACTGCCGAGTTCTTGACCAACTTCCCCACCGGCTTTGAGCACGACGATACCCGTTTCGGCCGCAAGGCGT ATGGTGGTATCAGTGCCAAGGATGCCATCACTTCCTCCACCTATACTCTCAAGAGTTTGACGGGAAGTTTCTGTG GTGTGACCCCACTGGTCGCCGATTTCAACCGCGAATTCGAACACCATATCTACCAGCCATGTCTGCCCCAGGTCT TCGACACGTTGAGTCAGCAACCGGATATCAACAGTGAGACCGACGACTTCACCAAGTGGCCGTGGCATTCGACCT TTATGATGTCGGTCACCGAAATGTACGACAATCAGTTCAAGTTGACTCCGCACTTGGGATTCCGCGATAAACAGA CAAAAGAGACGATCATCAAGCCCGATGCCAAGCATTTCCCGGTTAAAAGTGCCGAGGTGAACTACTATGGCTATC CGGAGACTGAGCTTCGAGAGTACATCCGTGATGCTATTGATGATGCGGAACGTGACCACCAGCGTCTCTTCCTCA CCCACCTCACGAGTACCACCCATCATCCTTGGGGAATTCCGAACGACGCCTTTGAAGAAATGATGGGCGCCAAAT CCGGTGCGAACGGCGATATGAATCGATACCTGAACTCCGTCGGTTATGTCGATGATTGGCTCTCGGAGCTCATCG ATATCCTGGAGGAGAAGGGAGTCGCTAATGAGACCTTGTTCGTCATGGCTGGCGATCACGGCCTTTCCCTCCCCA ACGACGGCGGTATCACTCCCTATGACAACCCCCACGTCGGCAGCTTCAAGGTGCCGATCGTGATTGCACACCCGC TCCTTCCTCCCGTCCAGATCGACACCCCAGTCATCAGCACCCAGATCGTCCCCACCATCATCGACTTGTTGATCG AGTCGGCATCCCTCAGCCAGGACAGCACGCGTGCCGCACGCGACATTCGCTCGCTGTACGAAGGTCAATCTATGA TCCGACCGCAGGTCGTCAAGCAGGACGGACGCGAAGCCTGGCACTTCACAGTCATGAACACTGGTGGTTCATGGC TCTCTGTTCGGTCGGCCGCCCGTCCCGAGTTCCGCCTAGTGATCCCGCTAGTCAACGACGTGGAATGGCGCTTCA CTGATGTGTCCAAGGACCCGAACGAGCTGAGCCCGATCGAGCGCTTCAGCCTTGCCGATCTCGCGTCCGCGGTCC AGGACGAGTATGAGGATGAAGAAATCATGAACTGGCTCTACCATGCAGCCTACGTCACCAACTGGTGGGTGCTGG AGAACTGGGACCGATGGAGATTCTCCCCAAAAGCCAAAGACGAGGCGAAAGAAGAGCCTCCTAAAGAAGAGCCCA AAGAGGAGCCCAAGGAAGACAAAACCTAA |