Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1690.t1
Gene name
Locationscaffold_02:600599..601487
Strand-
Gene length (bp)888
Transcript length (bp)729
Coding sequence length (bp)729
Protein length (aa) 243

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12352 V-SNARE_C Snare region anchored in the vesicle membrane C-terminus 1.5E-13 154 215

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 221 240 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1690.t1
MNSLFNSALKQSSSIRRDLDTFSQSPTTSSPALQGQLAASLASLSRTVDDYSALSKKELIPEKQQKAFDRVKNFR
SELADYRVQFDRLRKEREDAQSVTNHNELLGRRPHHAATPENPYAQSSLPQSTSAFAPSSSGLGFGAGPADYDRE
THALREQSFFSNTHNQLDDFLDRGRAVLADLGQQREVLKGTQRRLYSVANTLGVSGDTIRMVERRARQDKWIFWG
GVVIFFLFCWAVLHFLR*
Coding >Pro_DTO377G3_2|g1690.t1
ATGAACTCGCTATTCAACTCTGCTTTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCG
CCAACCACCTCCTCACCCGCGCTACAAGGCCAGCTTGCTGCTTCCTTGGCATCGCTTTCCCGCACCGTCGATGAC
TACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACAAAAGGCGTTCGACCGCGTCAAGAACTTCCGA
AGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAAAGAACGCGAAGATGCACAATCGGTCACCAAC
CACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCTTCACTCCCG
CAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTACGACCGCGAA
ACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGACCGCGGAAGA
GCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGCGTTGCGAAC
ACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATTTTCTGGGGT
GGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG
Transcript >Pro_DTO377G3_2|g1690.t1
ATGAACTCGCTATTCAACTCTGCTTTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCG
CCAACCACCTCCTCACCCGCGCTACAAGGCCAGCTTGCTGCTTCCTTGGCATCGCTTTCCCGCACCGTCGATGAC
TACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACAAAAGGCGTTCGACCGCGTCAAGAACTTCCGA
AGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAAAGAACGCGAAGATGCACAATCGGTCACCAAC
CACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCTTCACTCCCG
CAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTACGACCGCGAA
ACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGACCGCGGAAGA
GCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGCGTTGCGAAC
ACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATTTTCTGGGGT
GGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG
Gene >Pro_DTO377G3_2|g1690.t1
ATGGTATGTATATTGCAGTTCCTCGCGATAGGTTTACACAGCTAACATGAACAGAACTCGCTATTCAACTCTGCT
TTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCGCCAACCACCTCCTCACCCGCGCTA
CAAGGTGCGCTCCTACCACCGACTCTTCGCAACCTAAGATATTGACTTCTAGCTTCTAGGCCAGCTTGCTGCTTC
CTTGGCATCGCTTTCCCGCACCGTCGATGACTACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACA
AAAGGCGTTCGACCGCGTCAAGAACTTCCGAAGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAA
AGAACGCGAAGATGCAGTATGTATACATCAATCCTGTCATGAGATACTCCAATACTGACCTCATACCAGCAATCG
GTCACCAACCACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCT
TCACTCCCGCAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTAC
GACCGCGAAACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGAC
CGCGGAAGAGCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGC
GTTGCGAACACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATT
TTCTGGGGTGGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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