Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g1690.t1
Gene name
Location	scaffold_02:600599..601487
Strand	-
Gene length (bp)	888
Transcript length (bp)	729
Coding sequence length (bp)	729
Protein length (aa)	243

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12352	V-SNARE_C	Snare region anchored in the vesicle membrane C-terminus	1.5E-13	154	215

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 48	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	221	240	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1690.t1 MNSLFNSALKQSSSIRRDLDTFSQSPTTSSPALQGQLAASLASLSRTVDDYSALSKKELIPEKQQKAFDRVKNFR SELADYRVQFDRLRKEREDAQSVTNHNELLGRRPHHAATPENPYAQSSLPQSTSAFAPSSSGLGFGAGPADYDRE THALREQSFFSNTHNQLDDFLDRGRAVLADLGQQREVLKGTQRRLYSVANTLGVSGDTIRMVERRARQDKWIFWG GVVIFFLFCWAVLHFLR*
Coding	>Pro_DTO377G3_2\|g1690.t1 ATGAACTCGCTATTCAACTCTGCTTTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCG CCAACCACCTCCTCACCCGCGCTACAAGGCCAGCTTGCTGCTTCCTTGGCATCGCTTTCCCGCACCGTCGATGAC TACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACAAAAGGCGTTCGACCGCGTCAAGAACTTCCGA AGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAAAGAACGCGAAGATGCACAATCGGTCACCAAC CACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCTTCACTCCCG CAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTACGACCGCGAA ACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGACCGCGGAAGA GCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGCGTTGCGAAC ACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATTTTCTGGGGT GGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG
Transcript	>Pro_DTO377G3_2\|g1690.t1 ATGAACTCGCTATTCAACTCTGCTTTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCG CCAACCACCTCCTCACCCGCGCTACAAGGCCAGCTTGCTGCTTCCTTGGCATCGCTTTCCCGCACCGTCGATGAC TACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACAAAAGGCGTTCGACCGCGTCAAGAACTTCCGA AGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAAAGAACGCGAAGATGCACAATCGGTCACCAAC CACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCTTCACTCCCG CAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTACGACCGCGAA ACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGACCGCGGAAGA GCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGCGTTGCGAAC ACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATTTTCTGGGGT GGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG
Gene	>Pro_DTO377G3_2\|g1690.t1 ATGGTATGTATATTGCAGTTCCTCGCGATAGGTTTACACAGCTAACATGAACAGAACTCGCTATTCAACTCTGCT TTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCGCCAACCACCTCCTCACCCGCGCTA CAAGGTGCGCTCCTACCACCGACTCTTCGCAACCTAAGATATTGACTTCTAGCTTCTAGGCCAGCTTGCTGCTTC CTTGGCATCGCTTTCCCGCACCGTCGATGACTACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACA AAAGGCGTTCGACCGCGTCAAGAACTTCCGAAGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAA AGAACGCGAAGATGCAGTATGTATACATCAATCCTGTCATGAGATACTCCAATACTGACCTCATACCAGCAATCG GTCACCAACCACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCT TCACTCCCGCAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTAC GACCGCGAAACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGAC CGCGGAAGAGCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGC GTTGCGAACACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATT TTCTGGGGTGGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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