Protein ID | Pro_DTO377G3_2|g1690.t1 |
Gene name | |
Location | scaffold_02:600599..601487 |
Strand | - |
Gene length (bp) | 888 |
Transcript length (bp) | 729 |
Coding sequence length (bp) | 729 |
Protein length (aa) | 243 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12352 | V-SNARE_C | Snare region anchored in the vesicle membrane C-terminus | 1.5E-13 | 154 | 215 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 48 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 221 | 240 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1690.t1 MNSLFNSALKQSSSIRRDLDTFSQSPTTSSPALQGQLAASLASLSRTVDDYSALSKKELIPEKQQKAFDRVKNFR SELADYRVQFDRLRKEREDAQSVTNHNELLGRRPHHAATPENPYAQSSLPQSTSAFAPSSSGLGFGAGPADYDRE THALREQSFFSNTHNQLDDFLDRGRAVLADLGQQREVLKGTQRRLYSVANTLGVSGDTIRMVERRARQDKWIFWG GVVIFFLFCWAVLHFLR* |
Coding | >Pro_DTO377G3_2|g1690.t1 ATGAACTCGCTATTCAACTCTGCTTTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCG CCAACCACCTCCTCACCCGCGCTACAAGGCCAGCTTGCTGCTTCCTTGGCATCGCTTTCCCGCACCGTCGATGAC TACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACAAAAGGCGTTCGACCGCGTCAAGAACTTCCGA AGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAAAGAACGCGAAGATGCACAATCGGTCACCAAC CACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCTTCACTCCCG CAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTACGACCGCGAA ACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGACCGCGGAAGA GCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGCGTTGCGAAC ACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATTTTCTGGGGT GGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG |
Transcript | >Pro_DTO377G3_2|g1690.t1 ATGAACTCGCTATTCAACTCTGCTTTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCG CCAACCACCTCCTCACCCGCGCTACAAGGCCAGCTTGCTGCTTCCTTGGCATCGCTTTCCCGCACCGTCGATGAC TACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACAAAAGGCGTTCGACCGCGTCAAGAACTTCCGA AGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAAAGAACGCGAAGATGCACAATCGGTCACCAAC CACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCTTCACTCCCG CAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTACGACCGCGAA ACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGACCGCGGAAGA GCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGCGTTGCGAAC ACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATTTTCTGGGGT GGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG |
Gene | >Pro_DTO377G3_2|g1690.t1 ATGGTATGTATATTGCAGTTCCTCGCGATAGGTTTACACAGCTAACATGAACAGAACTCGCTATTCAACTCTGCT TTAAAGCAATCATCGTCGATCCGCCGTGATCTGGATACATTTTCACAGTCGCCAACCACCTCCTCACCCGCGCTA CAAGGTGCGCTCCTACCACCGACTCTTCGCAACCTAAGATATTGACTTCTAGCTTCTAGGCCAGCTTGCTGCTTC CTTGGCATCGCTTTCCCGCACCGTCGATGACTACTCCGCACTCTCCAAGAAGGAACTAATTCCGGAGAAACAACA AAAGGCGTTCGACCGCGTCAAGAACTTCCGAAGTGAGCTCGCGGACTATCGGGTACAATTCGATCGACTCCGCAA AGAACGCGAAGATGCAGTATGTATACATCAATCCTGTCATGAGATACTCCAATACTGACCTCATACCAGCAATCG GTCACCAACCACAATGAACTTCTAGGCCGTCGTCCACACCACGCCGCAACACCAGAGAACCCTTATGCGCAATCT TCACTCCCGCAGAGCACCTCAGCCTTCGCACCCTCATCATCCGGTCTCGGCTTTGGCGCTGGCCCCGCCGACTAC GACCGCGAAACCCACGCGCTACGCGAGCAGTCCTTCTTCTCCAACACACACAATCAACTCGATGATTTCCTAGAC CGCGGAAGAGCGGTCCTCGCTGATCTAGGACAGCAGCGCGAAGTACTCAAGGGAACTCAGCGGCGACTATACAGC GTTGCGAACACGCTTGGTGTTAGCGGCGATACGATCCGGATGGTGGAGCGGCGGGCGCGCCAGGATAAGTGGATT TTCTGGGGTGGTGTGGTAATTTTCTTTTTGTTCTGCTGGGCAGTGCTACACTTCTTGCGGTAG |