Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1689.t1
Gene name
Locationscaffold_02:598487..599672
Strand-
Gene length (bp)1185
Transcript length (bp)1023
Coding sequence length (bp)1023
Protein length (aa) 341

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02866 Ldh_1_C lactate/malate dehydrogenase, alpha/beta C-terminal domain 1.0E-44 170 336
PF00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain 3.8E-43 25 168

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1689.t1
MFAARRTVNLFQKRAFSASAFNASKVAVLGAAGGIGQPLSLLLKLNPRVSQLALYDIRGAPGVAADLSHINTNST
VTGYKPEGTGLKDCLEGSEIILIPAGVPRKPGMTRDDLFNTNASIVRDLAKAAAEAAPKALVLVIANPVNSTVPI
VAEVYKARNVYDPKRLFGITTLDVVRSSRFISQVEKTNPANEAVTVVGGHSGVTIVPLLSQSSHPSISGEVRDAL
VKRIQFGGDEVVQAKDGAGSATLSMAMAGARFAESLLRAAQGEKGVIEPTFVDSPLYKDQGVDFFASRVELGPNG
VEQILPVGKVNEYEQGLLDASLVDLKKNIKKGVDFVKANP*
Coding >Pro_DTO377G3_2|g1689.t1
ATGTTTGCTGCTCGTCGTACTGTCAACCTCTTCCAGAAGCGTGCCTTCTCGGCCTCCGCTTTCAATGCCTCCAAG
GTCGCCGTTCTCGGCGCTGCCGGTGGTATTGGCCAGCCTCTCTCGCTGCTGCTGAAGCTCAACCCCCGTGTTTCC
CAGCTCGCTCTCTACGATATCCGCGGTGCTCCCGGTGTCGCTGCTGATTTGAGCCACATCAACACCAACAGCACT
GTTACCGGCTACAAGCCCGAGGGTACCGGTCTCAAGGACTGCCTCGAGGGATCCGAGATCATCCTCATCCCCGCT
GGTGTTCCCCGCAAGCCCGGCATGACCCGTGATGATCTCTTCAACACCAACGCCTCCATTGTCCGCGACCTCGCC
AAGGCCGCCGCTGAGGCCGCCCCCAAGGCCCTGGTCCTTGTCATCGCCAACCCCGTCAACTCCACCGTCCCCATC
GTTGCCGAGGTCTACAAGGCCCGCAACGTCTACGACCCCAAGCGTCTGTTCGGTATCACCACCCTTGATGTCGTC
CGTTCTTCGCGCTTCATCTCCCAGGTTGAGAAGACCAACCCCGCCAATGAGGCCGTCACCGTCGTTGGTGGCCAC
TCCGGTGTGACCATCGTCCCCCTGCTTTCGCAGTCTAGCCACCCCTCCATCTCCGGCGAGGTCCGCGACGCCCTT
GTCAAGCGCATCCAGTTCGGTGGTGACGAGGTTGTCCAGGCTAAGGACGGTGCCGGTTCCGCCACCCTCTCCATG
GCCATGGCCGGTGCCCGCTTCGCCGAGTCTCTCCTCCGCGCCGCTCAGGGCGAGAAGGGTGTCATCGAGCCCACC
TTCGTCGACTCCCCTCTGTACAAGGACCAGGGTGTTGACTTCTTCGCTTCCCGCGTTGAGCTCGGCCCCAACGGT
GTTGAGCAGATCCTCCCCGTTGGCAAGGTCAACGAGTACGAGCAGGGTCTCCTCGATGCCTCCCTGGTTGACTTG
AAGAAGAACATCAAGAAGGGTGTTGACTTCGTCAAGGCTAACCCTTGA
Transcript >Pro_DTO377G3_2|g1689.t1
ATGTTTGCTGCTCGTCGTACTGTCAACCTCTTCCAGAAGCGTGCCTTCTCGGCCTCCGCTTTCAATGCCTCCAAG
GTCGCCGTTCTCGGCGCTGCCGGTGGTATTGGCCAGCCTCTCTCGCTGCTGCTGAAGCTCAACCCCCGTGTTTCC
CAGCTCGCTCTCTACGATATCCGCGGTGCTCCCGGTGTCGCTGCTGATTTGAGCCACATCAACACCAACAGCACT
GTTACCGGCTACAAGCCCGAGGGTACCGGTCTCAAGGACTGCCTCGAGGGATCCGAGATCATCCTCATCCCCGCT
GGTGTTCCCCGCAAGCCCGGCATGACCCGTGATGATCTCTTCAACACCAACGCCTCCATTGTCCGCGACCTCGCC
AAGGCCGCCGCTGAGGCCGCCCCCAAGGCCCTGGTCCTTGTCATCGCCAACCCCGTCAACTCCACCGTCCCCATC
GTTGCCGAGGTCTACAAGGCCCGCAACGTCTACGACCCCAAGCGTCTGTTCGGTATCACCACCCTTGATGTCGTC
CGTTCTTCGCGCTTCATCTCCCAGGTTGAGAAGACCAACCCCGCCAATGAGGCCGTCACCGTCGTTGGTGGCCAC
TCCGGTGTGACCATCGTCCCCCTGCTTTCGCAGTCTAGCCACCCCTCCATCTCCGGCGAGGTCCGCGACGCCCTT
GTCAAGCGCATCCAGTTCGGTGGTGACGAGGTTGTCCAGGCTAAGGACGGTGCCGGTTCCGCCACCCTCTCCATG
GCCATGGCCGGTGCCCGCTTCGCCGAGTCTCTCCTCCGCGCCGCTCAGGGCGAGAAGGGTGTCATCGAGCCCACC
TTCGTCGACTCCCCTCTGTACAAGGACCAGGGTGTTGACTTCTTCGCTTCCCGCGTTGAGCTCGGCCCCAACGGT
GTTGAGCAGATCCTCCCCGTTGGCAAGGTCAACGAGTACGAGCAGGGTCTCCTCGATGCCTCCCTGGTTGACTTG
AAGAAGAACATCAAGAAGGGTGTTGACTTCGTCAAGGCTAACCCTTGA
Gene >Pro_DTO377G3_2|g1689.t1
ATGTTTGCTGCTCGTCGTACTGTCAACCTCTTCCAGAAGCGTGCCTTCTCGGCCTCCGCTTTCAATGTGCGTTTC
TATTCATCTGTCTTCCCCAGAATTAAACCTAACTCTTCGCGCAGGCCTCCAAGGTCGCCGTTCTCGGCGCTGCCG
GTGGTATTGGCCAGCCTCTCTCGCTGCTGCTGAAGCTCAACCCCCGTGTTTCCCAGCTCGCTCTCTACGATATCC
GCGGTGCTCCCGGTATGAATGATCCAATTCGTTCAGCAAAAGCAATTACTGACTTTATTTAGGTGTCGCTGCTGA
TTTGAGCCACATCAACACCAACAGCACTGTTACCGGCTACAAGCCCGAGGGTACCGGTCTCAAGGACTGCCTCGA
GGGATCCGAGATCATCCTCATCCCCGCTGGTGTTCCCCGCAAGCCCGGCATGACCCGTGATGATCTCTTCAACAC
CAACGCCTCCATTGTCCGCGACCTCGCCAAGGCCGCCGCTGAGGCCGCCCCCAAGGCCCTGGTCCTTGTCATCGC
CAACCCCGTAAGTCGCAATTATCGCTCCACAATTCGAGGCCCCACTAACCACGCGTCATTAAAAAGGTCAACTCC
ACCGTCCCCATCGTTGCCGAGGTCTACAAGGCCCGCAACGTCTACGACCCCAAGCGTCTGTTCGGTATCACCACC
CTTGATGTCGTCCGTTCTTCGCGCTTCATCTCCCAGGTTGAGAAGACCAACCCCGCCAATGAGGCCGTCACCGTC
GTTGGTGGCCACTCCGGTGTGACCATCGTCCCCCTGCTTTCGCAGTCTAGCCACCCCTCCATCTCCGGCGAGGTC
CGCGACGCCCTTGTCAAGCGCATCCAGTTCGGTGGTGACGAGGTTGTCCAGGCTAAGGACGGTGCCGGTTCCGCC
ACCCTCTCCATGGCCATGGCCGGTGCCCGCTTCGCCGAGTCTCTCCTCCGCGCCGCTCAGGGCGAGAAGGGTGTC
ATCGAGCCCACCTTCGTCGACTCCCCTCTGTACAAGGACCAGGGTGTTGACTTCTTCGCTTCCCGCGTTGAGCTC
GGCCCCAACGGTGTTGAGCAGATCCTCCCCGTTGGCAAGGTCAACGAGTACGAGCAGGGTCTCCTCGATGCCTCC
CTGGTTGACTTGAAGAAGAACATCAAGAAGGGTGTTGACTTCGTCAAGGCTAACCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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