Protein ID | Pro_DTO377G3_2|g1684.t1 |
Gene name | |
Location | scaffold_02:583740..586856 |
Strand | + |
Gene length (bp) | 3116 |
Transcript length (bp) | 2913 |
Coding sequence length (bp) | 2913 |
Protein length (aa) | 971 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10366 | Vps39_1 | Vacuolar sorting protein 39 domain 1 | 1.7E-26 | 567 | 668 |
PF10367 | Vps39_2 | Vacuolar sorting protein 39 domain 2 | 3.9E-28 | 847 | 962 |
PF00780 | CNH | CNH domain | 5.7E-17 | 50 | 328 |
PF00637 | Clathrin | Region in Clathrin and VPS | 6.8E-10 | 696 | 820 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006886 | intracellular protein transport | Yes |
GO:0016192 | vesicle-mediated transport | Yes |
GO:0051641 | cellular localization | No |
GO:0051179 | localization | No |
GO:0015031 | protein transport | No |
GO:0070727 | cellular macromolecule localization | No |
GO:0071705 | nitrogen compound transport | No |
GO:0051234 | establishment of localization | No |
GO:0033036 | macromolecule localization | No |
GO:0046907 | intracellular transport | No |
GO:0071702 | organic substance transport | No |
GO:0009987 | cellular process | No |
GO:0051649 | establishment of localization in cell | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0008104 | protein localization | No |
GO:0045184 | establishment of protein localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1684.t1 MRRAPAAALLEPPVEGIEDSTPMLSAFTARPLVELKPRDKSRIESVLAYGDRLLTGLNNGNLRVYRVTDDGKTEL LRELEKFSRYKIEQLALIKEANVLVSLSGGYVWLHDAQSYQLVEQLTQTKGASVFAITSNVVNDPDTNVPAIVSR LAVAVKRKILMRAWRDMELERDTAELSLVSGVKTLTWVAATRLVVGLNSSFVMVNIENGQSTDLAGPGSIEEAGR FTGVGAASMSYIGMGGMVPRPLVTRLREGQILLAKDINTSFIDIDGQPLGRKQVPWSHAPVELGYSYPFLLALHD SSKGVLEVRNPETLSLLQSIPLPSASILHIPQPNISLAHAGKGFLVASDRTIWRMEALSYDTQIDALVEGGYLDE AISLLGMLEDALLRDKPGRLRAIRLEKAQSLFALNKYRESLDLFTEVSAPPESVIRLYPRLIAGDLSIVPESETL NGKTNGSSDGSGDDVAAGQTSTHAASIISSVPKPDEGSEASSIRGDDKGLRIAVRELQGYLADVRRRFQRFLNPD GSLKAAIPVEATDEASDSVLKLLDFPSPDEFASRICAKARLVDTTLFRAHMFATPSLAGSLFRIANFCDPEVVME RLEGTGRYNDLIDFLYGKKLHRQALELLQRFGQTNNGPLSGPTRTVAYLQNLPPDQIGLVLEFGEWPLRANRKLG MEIFLTDTENAETLPRPRVLAFLENIDTALAIQYLEHVIDEWNDMTPDIHQRLLILYLDQITSNEQGEWKEKFLT MLKESEQYSPAKMLDRLDREDANFYEARAILFSKMGQHRQALEIYVFKLADHEKAEEYCNQVHLAEKAEEENSIY LTLLSLYLTPPHGYEPQNDPAIELLAKHGSRLPADAALKLIPDKQAVEKLEFYFKGRMRAANSIFNEARIVANLR KARDMQIQAQLALGEGIRGGGTRARHVTVTEERICGVCHKRLGGSVINVFPDDTVVHLGCANRRPSVRVG* |
Coding | >Pro_DTO377G3_2|g1684.t1 ATGCGGAGAGCTCCAGCAGCGGCGCTCCTCGAACCTCCAGTGGAAGGAATTGAAGACAGCACGCCCATGTTGTCA GCATTCACCGCGCGGCCGCTCGTGGAGCTCAAGCCGCGCGACAAGTCTCGCATTGAATCAGTCCTAGCCTACGGT GACCGCCTCCTCACTGGTTTGAACAATGGCAACCTTCGCGTCTACCGCGTCACTGACGACGGCAAGACCGAGCTC CTTCGAGAACTAGAGAAATTCTCCCGATACAAGATTGAACAGCTTGCCTTGATTAAGGAGGCTAACGTACTAGTC TCTCTTTCTGGTGGTTATGTCTGGCTCCACGATGCGCAGTCGTACCAGCTTGTTGAACAGCTAACCCAAACGAAG GGTGCTTCTGTATTTGCCATCACGTCGAATGTTGTCAATGATCCCGATACAAATGTGCCTGCTATTGTTTCCCGC TTGGCAGTCGCTGTCAAGCGGAAAATTCTCATGCGGGCGTGGCGCGACATGGAACTGGAGCGGGATACGGCTGAG CTGAGCTTGGTTAGTGGGGTCAAGACTCTCACCTGGGTTGCGGCTACGCGACTAGTTGTTGGACTAAACTCGAGC TTTGTCATGGTCAATATCGAGAATGGACAGTCCACGGACCTGGCTGGGCCGGGCAGCATTGAGGAAGCAGGCCGG TTCACGGGTGTTGGCGCCGCGAGCATGAGTTATATTGGTATGGGAGGCATGGTGCCGCGGCCACTTGTGACGAGA CTGCGTGAAGGTCAGATTCTTCTGGCTAAGGATATCAACACGAGTTTCATCGATATTGACGGCCAACCTCTTGGT CGGAAGCAGGTGCCTTGGAGCCATGCCCCGGTGGAGCTTGGATACTCGTACCCGTTTCTGTTGGCTTTACATGAC TCATCCAAAGGTGTGTTGGAGGTACGAAACCCGGAGACCTTGTCGCTACTGCAGTCCATCCCGCTGCCGTCGGCT AGTATTTTGCACATTCCGCAGCCGAATATCAGCCTCGCCCATGCCGGTAAAGGGTTCCTCGTGGCGAGTGATCGC ACAATATGGCGTATGGAAGCCCTGAGCTATGATACCCAGATTGATGCTTTGGTTGAGGGTGGTTATCTAGATGAG GCTATCAGCTTACTCGGCATGCTGGAGGATGCTCTCTTACGGGATAAGCCTGGTCGACTGCGCGCGATAAGACTT GAAAAAGCGCAGAGCTTGTTTGCCTTGAACAAGTACCGGGAGTCTCTAGATCTTTTTACCGAGGTGTCTGCACCT CCCGAGAGTGTCATTCGCCTCTACCCTCGCTTGATCGCGGGCGATCTCTCTATAGTCCCGGAGTCTGAAACTCTG AATGGAAAGACGAACGGATCGAGTGATGGGTCGGGTGATGATGTTGCTGCTGGGCAGACATCAACACACGCAGCC TCTATTATATCATCTGTGCCAAAGCCTGATGAAGGAAGCGAGGCTAGCAGTATCCGTGGAGACGACAAAGGTCTT CGAATCGCTGTCCGCGAGCTACAAGGATACCTAGCAGATGTTCGCCGACGCTTCCAGCGCTTCCTCAACCCCGAC GGATCTCTCAAAGCTGCTATACCAGTCGAAGCCACAGATGAGGCAAGTGACTCGGTTCTTAAGTTACTAGATTTC CCATCTCCCGATGAGTTTGCCTCACGAATTTGTGCCAAGGCACGGTTGGTTGACACCACTTTGTTCCGTGCACAC ATGTTCGCGACGCCATCACTAGCTGGATCCCTCTTCCGCATTGCCAACTTCTGCGATCCAGAAGTAGTCATGGAG AGACTCGAGGGCACTGGCAGATATAACGACCTAATTGATTTCCTTTACGGCAAGAAATTGCATCGCCAAGCACTC GAATTACTTCAGCGCTTTGGACAGACAAATAACGGACCTCTGAGCGGCCCGACACGCACAGTCGCGTATCTTCAA AACCTACCTCCGGATCAAATTGGCCTGGTACTCGAGTTCGGAGAATGGCCACTTCGTGCCAACCGCAAGTTGGGA ATGGAGATATTCCTGACCGACACTGAAAATGCTGAGACATTGCCTCGTCCACGGGTCCTCGCATTCCTTGAAAAC ATAGACACCGCGCTTGCCATTCAATACCTCGAGCATGTCATTGATGAATGGAACGACATGACGCCGGACATACAC CAGCGGCTGCTCATCTTATACTTAGATCAAATTACATCCAACGAGCAAGGGGAATGGAAGGAGAAGTTCTTGACG ATGTTGAAAGAGAGCGAGCAATACTCGCCAGCGAAGATGTTAGATCGGCTCGATCGAGAGGATGCCAACTTCTAC GAAGCCCGAGCTATTTTGTTTAGCAAGATGGGTCAGCACCGACAGGCGCTTGAGATCTACGTCTTCAAACTTGCG GACCACGAGAAAGCGGAAGAATACTGCAACCAGGTCCATCTCGCCGAAAAGGCCGAAGAAGAGAATTCCATCTAT CTCACCCTCCTTTCCCTCTATCTCACCCCACCCCACGGCTATGAGCCCCAAAACGACCCCGCGATTGAACTGCTA GCCAAACACGGCTCACGCCTCCCAGCCGACGCCGCATTGAAACTCATCCCGGACAAACAGGCCGTGGAGAAACTT GAATTCTATTTCAAGGGCCGCATGCGCGCCGCAAACTCAATTTTCAATGAAGCGCGCATCGTGGCAAACCTGCGC AAGGCACGGGATATGCAGATCCAAGCCCAGCTCGCTCTCGGTGAGGGAATTCGTGGTGGAGGCACGCGGGCTCGC CACGTCACTGTCACCGAGGAGCGAATTTGCGGCGTCTGCCATAAGCGTTTGGGTGGGAGTGTGATCAATGTTTTC CCCGATGATACGGTGGTTCACTTGGGGTGTGCCAATCGAAGACCCAGTGTTCGAGTTGGGTAG |
Transcript | >Pro_DTO377G3_2|g1684.t1 ATGCGGAGAGCTCCAGCAGCGGCGCTCCTCGAACCTCCAGTGGAAGGAATTGAAGACAGCACGCCCATGTTGTCA GCATTCACCGCGCGGCCGCTCGTGGAGCTCAAGCCGCGCGACAAGTCTCGCATTGAATCAGTCCTAGCCTACGGT GACCGCCTCCTCACTGGTTTGAACAATGGCAACCTTCGCGTCTACCGCGTCACTGACGACGGCAAGACCGAGCTC CTTCGAGAACTAGAGAAATTCTCCCGATACAAGATTGAACAGCTTGCCTTGATTAAGGAGGCTAACGTACTAGTC TCTCTTTCTGGTGGTTATGTCTGGCTCCACGATGCGCAGTCGTACCAGCTTGTTGAACAGCTAACCCAAACGAAG GGTGCTTCTGTATTTGCCATCACGTCGAATGTTGTCAATGATCCCGATACAAATGTGCCTGCTATTGTTTCCCGC TTGGCAGTCGCTGTCAAGCGGAAAATTCTCATGCGGGCGTGGCGCGACATGGAACTGGAGCGGGATACGGCTGAG CTGAGCTTGGTTAGTGGGGTCAAGACTCTCACCTGGGTTGCGGCTACGCGACTAGTTGTTGGACTAAACTCGAGC TTTGTCATGGTCAATATCGAGAATGGACAGTCCACGGACCTGGCTGGGCCGGGCAGCATTGAGGAAGCAGGCCGG TTCACGGGTGTTGGCGCCGCGAGCATGAGTTATATTGGTATGGGAGGCATGGTGCCGCGGCCACTTGTGACGAGA CTGCGTGAAGGTCAGATTCTTCTGGCTAAGGATATCAACACGAGTTTCATCGATATTGACGGCCAACCTCTTGGT CGGAAGCAGGTGCCTTGGAGCCATGCCCCGGTGGAGCTTGGATACTCGTACCCGTTTCTGTTGGCTTTACATGAC TCATCCAAAGGTGTGTTGGAGGTACGAAACCCGGAGACCTTGTCGCTACTGCAGTCCATCCCGCTGCCGTCGGCT AGTATTTTGCACATTCCGCAGCCGAATATCAGCCTCGCCCATGCCGGTAAAGGGTTCCTCGTGGCGAGTGATCGC ACAATATGGCGTATGGAAGCCCTGAGCTATGATACCCAGATTGATGCTTTGGTTGAGGGTGGTTATCTAGATGAG GCTATCAGCTTACTCGGCATGCTGGAGGATGCTCTCTTACGGGATAAGCCTGGTCGACTGCGCGCGATAAGACTT GAAAAAGCGCAGAGCTTGTTTGCCTTGAACAAGTACCGGGAGTCTCTAGATCTTTTTACCGAGGTGTCTGCACCT CCCGAGAGTGTCATTCGCCTCTACCCTCGCTTGATCGCGGGCGATCTCTCTATAGTCCCGGAGTCTGAAACTCTG AATGGAAAGACGAACGGATCGAGTGATGGGTCGGGTGATGATGTTGCTGCTGGGCAGACATCAACACACGCAGCC TCTATTATATCATCTGTGCCAAAGCCTGATGAAGGAAGCGAGGCTAGCAGTATCCGTGGAGACGACAAAGGTCTT CGAATCGCTGTCCGCGAGCTACAAGGATACCTAGCAGATGTTCGCCGACGCTTCCAGCGCTTCCTCAACCCCGAC GGATCTCTCAAAGCTGCTATACCAGTCGAAGCCACAGATGAGGCAAGTGACTCGGTTCTTAAGTTACTAGATTTC CCATCTCCCGATGAGTTTGCCTCACGAATTTGTGCCAAGGCACGGTTGGTTGACACCACTTTGTTCCGTGCACAC ATGTTCGCGACGCCATCACTAGCTGGATCCCTCTTCCGCATTGCCAACTTCTGCGATCCAGAAGTAGTCATGGAG AGACTCGAGGGCACTGGCAGATATAACGACCTAATTGATTTCCTTTACGGCAAGAAATTGCATCGCCAAGCACTC GAATTACTTCAGCGCTTTGGACAGACAAATAACGGACCTCTGAGCGGCCCGACACGCACAGTCGCGTATCTTCAA AACCTACCTCCGGATCAAATTGGCCTGGTACTCGAGTTCGGAGAATGGCCACTTCGTGCCAACCGCAAGTTGGGA ATGGAGATATTCCTGACCGACACTGAAAATGCTGAGACATTGCCTCGTCCACGGGTCCTCGCATTCCTTGAAAAC ATAGACACCGCGCTTGCCATTCAATACCTCGAGCATGTCATTGATGAATGGAACGACATGACGCCGGACATACAC CAGCGGCTGCTCATCTTATACTTAGATCAAATTACATCCAACGAGCAAGGGGAATGGAAGGAGAAGTTCTTGACG ATGTTGAAAGAGAGCGAGCAATACTCGCCAGCGAAGATGTTAGATCGGCTCGATCGAGAGGATGCCAACTTCTAC GAAGCCCGAGCTATTTTGTTTAGCAAGATGGGTCAGCACCGACAGGCGCTTGAGATCTACGTCTTCAAACTTGCG GACCACGAGAAAGCGGAAGAATACTGCAACCAGGTCCATCTCGCCGAAAAGGCCGAAGAAGAGAATTCCATCTAT CTCACCCTCCTTTCCCTCTATCTCACCCCACCCCACGGCTATGAGCCCCAAAACGACCCCGCGATTGAACTGCTA GCCAAACACGGCTCACGCCTCCCAGCCGACGCCGCATTGAAACTCATCCCGGACAAACAGGCCGTGGAGAAACTT GAATTCTATTTCAAGGGCCGCATGCGCGCCGCAAACTCAATTTTCAATGAAGCGCGCATCGTGGCAAACCTGCGC AAGGCACGGGATATGCAGATCCAAGCCCAGCTCGCTCTCGGTGAGGGAATTCGTGGTGGAGGCACGCGGGCTCGC CACGTCACTGTCACCGAGGAGCGAATTTGCGGCGTCTGCCATAAGCGTTTGGGTGGGAGTGTGATCAATGTTTTC CCCGATGATACGGTGGTTCACTTGGGGTGTGCCAATCGAAGACCCAGTGTTCGAGTTGGGTAG |
Gene | >Pro_DTO377G3_2|g1684.t1 ATGCGGAGAGCTCCAGCAGCGGCGCTCCTCGAACCTCCAGTGGAAGGAATTGAAGACAGCACGCCCATGTTGTCA GCATTCACCGCGCGGCCGCTCGTGGAGCTCAAGCCGCGCGACAAGTCTCGCATTGAATCAGTCCTAGCCTACGGT GACCGCCTCCTCACTGGTTTGAACAATGGCAACCTTCGCGTCTACCGCGTCACTGACGACGGCAAGACCGAGCTC CTTCGAGAACTAGAGAAATTCTCCCGATACAAGATTGAACAGCTTGCCTTGATTAAGGAGGCTAACGTACTAGTC TCTCTTTCTGGTGGTTATGTCTGGCTCCACGATGCGCAGTCGTACCAGCTTGTTGAACAGCTAACCCAAACGAAG GGTGCTTCTGTATTTGCCATCACGTCGAATGTTGTCAATGATCCCGATACAAATGTGCCTGCTATTGTTTCCCGC TTGGCAGTCGCTGTCAAGCGGAAAATTCTCATGCGGGCGTGGCGCGACATGGAACTGGAGCGGGATACGGCTGAG CTGAGCTTGGTTAGTGGGGTCAAGACTCTCACCTGGGTTGCGGCTACGCGACTAGTTGTTGGACTAAACTCGAGC TTTGTCATGGTCAATATCGAGAATGGACAGTCCACGGACCTGGCTGGGCCGGGCAGCATTGAGGAAGCAGGCCGG TTCACGGGTGTTGGCGCCGCGAGCATGAGTTATATTGGTATGGGAGGCATGGTGCCGCGGCCACTTGTGACGAGA CTGCGTGAAGGTCAGATTCTTCTGGCTAAGGATATCAACACGAGTTTCATCGATATTGACGGCCAACCTCTTGGT CGGAAGCAGGTGCCTTGGAGCCATGCCCCGGTGGAGCTTGGATACTCGTACCCGTTTCTGTTGGCTTTACATGAC TCATCCAAAGGTGTGTTGGAGGTACGAAACCCGGAGACCTTGTCGCTACTGCAGTCCATCCCGCTGCCGTCGGCT AGTATTTTGCACATTCCGCAGCCGAATATCAGCCTCGCCCATGCCGGTAAAGGGTTCCTCGTGGCGAGTGATCGC ACAATATGGCGTATGGAAGCCCTGAGCTATGATACCCAGATTGATGCTTTGGTTGAGGGTGGTTATCTAGATGAG GCTATCAGCTTACTCGGCATGCTGGAGGATGCTCTCTTACGGGATAAGCCTGGTCGACTGCGCGCGATAAGACTT GAAAAAGCGCAGAGCTTGTTTGCCTTGAACAAGTACCGGGAGTCTCTAGATCTTTTTACCGAGGTGTCTGCACCT CCCGAGAGTGTCATTCGCCTCTACCCTCGCTTGATCGCGGGCGATCTCTCTATAGTCCCGGAGTCTGAAACTCTG AATGGAAAGACGAACGGATCGAGTGATGGGTCGGGTGATGATGTTGCTGCTGGGCAGACATCAACACACGCAGCC TCTATTATATCATCTGTGCCAAAGCCTGATGAAGGAAGCGAGGCTAGCAGTATCCGTGGAGACGACAAAGGTACG ACAAGCTCCCCTTTTTTTTGAATATATGCTAATTAATCATAGGTCTTCGAATCGCTGTCCGCGAGCTACAAGGAT ACCTAGCAGATGTTCGCCGACGCTTCCAGCGCTTCCTCAACCCCGACGGATCTCTCAAAGCTGCTATACCAGTCG AAGCCACAGATGAGGCAAGTGACTCGGTTCTTAAGTTACTAGATTTCCCATCTCCCGATGAGTTTGCCTCACGAA TTTGTGCCAAGGCACGGTTGGTTGACACCACTTTGTTCCGTGCACACATGTTCGCGACGCCATCACTAGCTGGAT CCCTCTTCCGCATTGCCAACTTCTGCGATCCAGAAGTAGTCATGGAGAGACTCGAGGGCACTGGCAGATATAACG ACCTAATTGATTTCCTTTACGGCAAGAAATTGCATCGCCAAGCACTCGAATTACTTCAGCGCTTTGGACAGACAA ATAACGGACCTCTGAGCGGCCCGACACGCACAGTCGCGTATCTTCAAAACCTACCTCCGGATCAAATTGGCCTGG TACTCGAGTTCGGAGAATGGCCACTTCGTGCCAACCGCAAGTTGGGAATGGAGATATTCCTGACCGACACTGAAA ATGCTGAGACATTGCCTCGTCCACGGGTCCTCGCATTCCTTGAAAACATAGACACCGCGCTTGCCATTCAATACC TCGAGCATGTCATTGATGAATGGAACGACATGACGCCGGACATACACCAGCGGCTGCTCATCTTATACTTAGATC AAATTACATCCAACGAGCAAGGGGAATGGAAGGAGAAGTTCTTGACGATGTTGAAAGAGAGCGAGCAATACTCGC CAGCGAAGATGTTAGATCGGCTCGATCGAGAGGGTACATTGCGCGCTACTCCTGTGAAACAAGCCATCACTGACA TATCCCAGATGCCAACTTCTACGAAGCCCGAGCTATTTTGTTTAGCAAGATGGGTCAGCACCGACAGGCGCTTGA GATCTACGTCTTCAAACTTGCGGACCACGAGAAAGCGGAAGAGTGAGTGATATGTGACTTCACCAAGAGCAACAA TTGCTAACACCAGAAAGATACTGCAACCAGGTCCATCTCGCCGAAAAGGCCGAAGAAGAGAATTCCATCTATCTC ACCCTCCTTTCCCTCTATCTCACCCCACCCCACGGCTATGAGCCCCAAAACGACCCCGCGATTGAACTGCTAGCC AAACACGGCTCACGCCTCCCAGCCGACGCCGCATTGAAACTCATCCCGGACAAACAGGCCGTGGAGAAACTTGAA TTCTATTTCAAGGGCCGCATGCGCGCCGCAAACTCAATTTTCAATGAAGCGCGCATCGTGGCAAACCTGCGCAAG GCACGGGATATGCAGATCCAAGCCCAGCTCGCTCTCGGTGAGGGAATTCGTGGTGGAGGCACGCGGGCTCGCCAC GTCACTGTCACCGAGGAGCGAATTTGCGGCGTCTGCCATAAGCGTTTGGGTGGGAGTGTGATCAATGTTTTCCCC GAGTAAGTCGTTTTCAGTCATTTGCTTTTGGTTTGTTCGTCGCTAACTTGTTTTCCAGTGATACGGTGGTTCACT TGGGGTGTGCCAATCGAAGACCCAGTGTTCGAGTTGGGTAG |