Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1675.t1
Gene name
Locationscaffold_02:568062..568732
Strand-
Gene length (bp)670
Transcript length (bp)621
Coding sequence length (bp)621
Protein length (aa) 207

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11807 UstYa Mycotoxin biosynthesis protein UstYa 8.9E-20 95 189

GO

GO Term Description Terminal node
GO:0043386 mycotoxin biosynthetic process Yes
GO:0009403 toxin biosynthetic process No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0009404 toxin metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0044550 secondary metabolite biosynthetic process No
GO:0019748 secondary metabolic process No
GO:0043385 mycotoxin metabolic process No
GO:0009058 biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 20.06 7.13 33.00
5d_25C Five days - 25 degrees Celsius 31.03 12.93 49.13
7d_25C Seven days - 25 degrees Celsius 30.89 11.90 49.88
10d_25C Ten days - 25 degrees Celsius 12.68 3.35 22.02
7d_15C Seven days - 15 degrees Celsius 79.39 35.50 123.27
7d_30C Seven days - 30 degrees Celsius 49.65 23.00 76.30

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.216805 no
3d_25C 7d_25C 0.233143 no
3d_25C 7d_15C 0.000700 yes
3d_25C 7d_30C 0.002761 yes
3d_25C 10d_25C 0.244357 no
5d_25C 7d_25C 0.993448 no
5d_25C 7d_15C 0.000700 yes
5d_25C 7d_30C 0.135543 no
5d_25C 10d_25C 0.009770 yes
7d_25C 7d_15C 0.001278 yes
7d_25C 7d_30C 0.139016 no
7d_25C 10d_25C 0.011993 yes
7d_15C 7d_30C 0.124909 no
7d_15C 10d_25C 0.000700 yes
7d_30C 10d_25C 0.000700 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1675.t1
MFPKSVTRLSGPYLGLLAALSVCLILNLGALFFSLRILIRGTRGYTYLAGDRPRELPIKVRTIQAAFHDDPSHYG
MEGITATAEWNAIRPPGKGFVFLGEEHFAFDVSMWHQMHCLNHIRAVLVNGDDGSDHTAHCFHYLRQGILCAADT
TLESGGTNMKLANGDKVATGGGTVHTCRDWRQVHDWMENQHKEWTPEMYTRFQESS*
Coding >Pro_DTO377G3_2|g1675.t1
ATGTTCCCTAAGTCCGTGACCCGATTAAGCGGCCCCTACCTCGGCCTTCTCGCAGCGCTGAGCGTATGCCTCATC
CTGAATCTGGGCGCCCTCTTCTTCTCACTCCGCATCTTAATACGCGGAACGCGGGGATACACCTACCTCGCCGGC
GACCGACCTCGTGAGCTCCCCATAAAGGTCCGCACCATCCAAGCCGCCTTCCACGACGACCCCTCCCATTACGGT
ATGGAAGGCATCACGGCCACGGCTGAATGGAACGCAATCCGCCCTCCCGGCAAGGGTTTCGTTTTTCTAGGGGAG
GAGCACTTCGCATTTGATGTGTCGATGTGGCACCAGATGCATTGCCTTAACCATATACGCGCGGTGCTTGTTAAT
GGGGACGACGGGTCGGACCATACGGCGCACTGCTTCCATTACCTACGGCAGGGCATTCTCTGCGCCGCTGACACA
ACCCTAGAGTCGGGCGGCACGAACATGAAATTGGCTAATGGGGATAAAGTTGCTACGGGCGGAGGGACCGTACAT
ACCTGCCGGGACTGGAGACAGGTGCATGATTGGATGGAAAACCAGCATAAGGAGTGGACACCAGAAATGTATACA
AGGTTTCAGGAGTCGAGTTAA
Transcript >Pro_DTO377G3_2|g1675.t1
ATGTTCCCTAAGTCCGTGACCCGATTAAGCGGCCCCTACCTCGGCCTTCTCGCAGCGCTGAGCGTATGCCTCATC
CTGAATCTGGGCGCCCTCTTCTTCTCACTCCGCATCTTAATACGCGGAACGCGGGGATACACCTACCTCGCCGGC
GACCGACCTCGTGAGCTCCCCATAAAGGTCCGCACCATCCAAGCCGCCTTCCACGACGACCCCTCCCATTACGGT
ATGGAAGGCATCACGGCCACGGCTGAATGGAACGCAATCCGCCCTCCCGGCAAGGGTTTCGTTTTTCTAGGGGAG
GAGCACTTCGCATTTGATGTGTCGATGTGGCACCAGATGCATTGCCTTAACCATATACGCGCGGTGCTTGTTAAT
GGGGACGACGGGTCGGACCATACGGCGCACTGCTTCCATTACCTACGGCAGGGCATTCTCTGCGCCGCTGACACA
ACCCTAGAGTCGGGCGGCACGAACATGAAATTGGCTAATGGGGATAAAGTTGCTACGGGCGGAGGGACCGTACAT
ACCTGCCGGGACTGGAGACAGGTGCATGATTGGATGGAAAACCAGCATAAGGAGTGGACACCAGAAATGTATACA
AGGTTTCAGGAGTCGAGTTAA
Gene >Pro_DTO377G3_2|g1675.t1
ATGTTCCCTAAGTCCGTGACCCGATTAAGCGGCCCCTACCTCGGCCTTCTCGCAGCGCTGAGCGTATGCCTCATC
CTGAATCTGGGCGCCCTCTTCTTCTCACTCCGCATCTTAATACGCGGAACGCGGGGATACAGTGCGCCATAATCC
TGATTCTCCTCTCACTCATGACTAACGCACAGCAGCCTACCTCGCCGGCGACCGACCTCGTGAGCTCCCCATAAA
GGTCCGCACCATCCAAGCCGCCTTCCACGACGACCCCTCCCATTACGGTATGGAAGGCATCACGGCCACGGCTGA
ATGGAACGCAATCCGCCCTCCCGGCAAGGGTTTCGTTTTTCTAGGGGAGGAGCACTTCGCATTTGATGTGTCGAT
GTGGCACCAGATGCATTGCCTTAACCATATACGCGCGGTGCTTGTTAATGGGGACGACGGGTCGGACCATACGGC
GCACTGCTTCCATTACCTACGGCAGGGCATTCTCTGCGCCGCTGACACAACCCTAGAGTCGGGCGGCACGAACAT
GAAATTGGCTAATGGGGATAAAGTTGCTACGGGCGGAGGGACCGTACATACCTGCCGGGACTGGAGACAGGTGCA
TGATTGGATGGAAAACCAGCATAAGGAGTGGACACCAGAAATGTATACAAGGTTTCAGGAGTCGAGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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