© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g1673.t1 |
| Gene name | |
| Location | scaffold_02:564822..566282 |
| Strand | - |
| Gene length (bp) | 1460 |
| Transcript length (bp) | 1260 |
| Coding sequence length (bp) | 1260 |
| Protein length (aa) | 420 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07942 | CARME | Carnosine N-methyltransferase | 3.4E-55 | 175 | 418 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 7.1E-07 | 281 | 351 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | Yes |
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1673.t1 MRTSIYISRFIALLLCIAFPLYLAIRGSASLSDIAVLLSSLSERAEALHVELTSPLTAPLAAPPAPISGGAFEAS AEPAKPRKRYSSLPNGLAHCINSFEQYPFLAEQVLQRKHARYSKQTPAQKAISNKLGYPAHFEKARKGVEVNARF SEKIAQIAREDYHTGPRALEDNEDAEFGVVDLAFGHLSRDWSTQGVKERQAVFPPVLDGLEQHFGGNGRGNKVLV PGSGMGRLASDIADIGYDVTANELDYGSILAYRLLTNHTTSLHQHTLQPFVTKWTYQANPSSRYSALTVPDHWPN KAVKLVEGDFLEMFPEDGEFDAVVTLFFIDISKNVIDFLGNIHRLLKPGGVWINLGPLKWGSHTALQLSAEEVLQ LADLLGFDVDYTSRKSIDSLYAEQPETLLKFTYVTQFWSATKRE* |
| Coding | >Pro_DTO377G3_2|g1673.t1 ATGCGCACCTCTATCTACATCTCCCGCTTCATTGCTCTCCTCCTCTGCATCGCCTTCCCCCTCTACCTCGCTATC CGTGGCTCTGCCTCGTTGTCCGACATCGCAGTTCTCCTCTCCTCCCTCTCCGAGCGCGCCGAAGCCCTTCACGTC GAGCTCACCTCCCCGCTCACCGCCCCGCTTGCCGCCCCTCCAGCACCAATCTCCGGAGGAGCCTTCGAAGCTTCC GCCGAGCCTGCCAAACCCAGGAAAAGATACTCCTCCCTTCCCAATGGACTGGCGCACTGCATCAATTCCTTCGAG CAGTATCCGTTCCTCGCCGAGCAAGTGCTCCAGCGGAAGCATGCGCGGTATTCCAAGCAGACACCCGCGCAGAAG GCGATAAGCAACAAGCTCGGCTATCCTGCACACTTCGAGAAAGCTAGGAAGGGGGTCGAAGTGAATGCCCGGTTC TCGGAAAAGATCGCGCAGATTGCGAGAGAGGATTACCACACCGGCCCACGAGCACTGGAGGACAATGAAGACGCG GAGTTTGGAGTTGTGGACCTGGCGTTTGGGCATCTTTCGCGAGATTGGAGCACACAGGGCGTAAAGGAGAGGCAG GCCGTATTTCCGCCTGTTCTGGATGGGCTTGAGCAACATTTTGGCGGGAACGGGAGAGGGAATAAGGTACTTGTA CCCGGAAGCGGCATGGGCAGGCTGGCAAGCGATATCGCTGATATAGGGTACGATGTCACGGCCAATGAGCTGGAC TACGGCTCCATCCTGGCCTACCGCCTGCTAACGAACCATACGACCTCGCTGCACCAGCACACCCTGCAGCCCTTT GTGACCAAATGGACGTATCAGGCCAACCCCTCCTCGCGCTATTCCGCCCTAACGGTGCCGGACCACTGGCCAAAC AAGGCCGTCAAGCTCGTCGAGGGCGACTTCTTAGAGATGTTCCCCGAGGACGGTGAGTTCGATGCCGTCGTCACG CTCTTCTTCATCGACATTTCCAAGAACGTGATTGATTTCTTGGGCAACATACATCGGCTACTAAAGCCTGGTGGG GTGTGGATCAATCTTGGGCCGCTAAAATGGGGCAGCCACACCGCTCTCCAGCTCTCCGCTGAGGAAGTGCTCCAG CTGGCAGATCTGCTCGGGTTCGATGTGGACTATACGTCAAGGAAGAGCATCGACAGTCTATATGCCGAGCAGCCA GAGACGTTGCTGAAGTTCACTTATGTTACGCAGTTCTGGTCTGCGACGAAGAGGGAGTAA |
| Transcript | >Pro_DTO377G3_2|g1673.t1 ATGCGCACCTCTATCTACATCTCCCGCTTCATTGCTCTCCTCCTCTGCATCGCCTTCCCCCTCTACCTCGCTATC CGTGGCTCTGCCTCGTTGTCCGACATCGCAGTTCTCCTCTCCTCCCTCTCCGAGCGCGCCGAAGCCCTTCACGTC GAGCTCACCTCCCCGCTCACCGCCCCGCTTGCCGCCCCTCCAGCACCAATCTCCGGAGGAGCCTTCGAAGCTTCC GCCGAGCCTGCCAAACCCAGGAAAAGATACTCCTCCCTTCCCAATGGACTGGCGCACTGCATCAATTCCTTCGAG CAGTATCCGTTCCTCGCCGAGCAAGTGCTCCAGCGGAAGCATGCGCGGTATTCCAAGCAGACACCCGCGCAGAAG GCGATAAGCAACAAGCTCGGCTATCCTGCACACTTCGAGAAAGCTAGGAAGGGGGTCGAAGTGAATGCCCGGTTC TCGGAAAAGATCGCGCAGATTGCGAGAGAGGATTACCACACCGGCCCACGAGCACTGGAGGACAATGAAGACGCG GAGTTTGGAGTTGTGGACCTGGCGTTTGGGCATCTTTCGCGAGATTGGAGCACACAGGGCGTAAAGGAGAGGCAG GCCGTATTTCCGCCTGTTCTGGATGGGCTTGAGCAACATTTTGGCGGGAACGGGAGAGGGAATAAGGTACTTGTA CCCGGAAGCGGCATGGGCAGGCTGGCAAGCGATATCGCTGATATAGGGTACGATGTCACGGCCAATGAGCTGGAC TACGGCTCCATCCTGGCCTACCGCCTGCTAACGAACCATACGACCTCGCTGCACCAGCACACCCTGCAGCCCTTT GTGACCAAATGGACGTATCAGGCCAACCCCTCCTCGCGCTATTCCGCCCTAACGGTGCCGGACCACTGGCCAAAC AAGGCCGTCAAGCTCGTCGAGGGCGACTTCTTAGAGATGTTCCCCGAGGACGGTGAGTTCGATGCCGTCGTCACG CTCTTCTTCATCGACATTTCCAAGAACGTGATTGATTTCTTGGGCAACATACATCGGCTACTAAAGCCTGGTGGG GTGTGGATCAATCTTGGGCCGCTAAAATGGGGCAGCCACACCGCTCTCCAGCTCTCCGCTGAGGAAGTGCTCCAG CTGGCAGATCTGCTCGGGTTCGATGTGGACTATACGTCAAGGAAGAGCATCGACAGTCTATATGCCGAGCAGCCA GAGACGTTGCTGAAGTTCACTTATGTTACGCAGTTCTGGTCTGCGACGAAGAGGGAGTAA |
| Gene | >Pro_DTO377G3_2|g1673.t1 ATGCGCACCTCTATCTACATCTCCCGCTTCATTGCTCTCCTCCTCTGCATCGCCTTCCCCCTCTACCTCGCTATC CGTGGCTCTGCCTCGTTGTCCGACATCGCAGTTCTCCTCTCCTCCCTCTCCGAGCGCGCCGAAGCCCTTCACGTC GAGCTCACCTCCCCGCTCACCGCCCCGCTTGCCGCCCCTCCAGCACCAATCTCCGGAGGAGCCTTCGAAGCTTCC GCCGAGCCTGCCAAACCCAGGAAAAGATACTCCTCCCTTCCCAATGGACTGGCGCACTGCATCAATTCCTTCGAG CAGTATCCGTTCCTCGCCGAGCAAGTGCTCCAGCGGAAGCATGCGCGGTATTCCAAGCAGACACCCGCGCAGAAG GCGATAAGCAACAAGCTCGGCTATCCTGCACACTTCGAGAAAGCTAGGAAGGGGGTCGAAGTGAATGCCCGGTTC TCGGAAAAGATCGCGCAGATTGCGAGAGAGGATTACCACACCGGCCCACGAGCACTGGAGGACAATGAAGACGCG GAGTTTGGAGTTGTGGACCTGGCGTTTGGGCATCTTTCGCGAGATTGGAGCACACAGGGCGTAAAGGAGAGGCAG GCCGTATTTCCGCCTGTTCTGGATGGGCTTGAGCAACATTTTGGCGGGAACGGGAGAGGGAATAAGGTACTTGTA CCCGGAAGCGGCATGGGCAGGCTGGCAAGCGATATCGCTGATATAGGTGCGTCTATTTTACTTCCTTGAGTGGAA GGCGCGACCTCACATCGGTGCAGGGTACGATGTCACGGCCAATGAGCTGGACTACGGCTCCATCCTGGCCTACCG CCTGCTAACGAACCATACGACCTCGCTGCACCAGCACACCCTGCAGCCCTTTGTGACCAAATGGACGTATCAGGC CAACCCCTCCTCGCGCTATTCCGCCCTAACGGTGCCGGACCACTGGCCAAACAAGGCCGTCAAGCTCGTCGAGGG CGACTTCTTAGAGATGTTCCCCGAGGACGGTGAGTTCGATGCCGTCGTCACGCTCTTCTTCATCGACATTTCCAA GAACGTGATTGATTTCTTGGGCAACATACATCGGCTACTAAAGCCTGGTGGGGTGTGGATCAATCTTGGGCGTAT GTTACTGTCCTCCCTTCCTTGAACACTGACATTTATGCATCTCTTGTGATCCGTTCACCGCCGAACTCGGGCTGA CGTGTATGTACGCAGCGCTAAAATGGGGCAGCCACACCGCTCTCCAGCTCTCCGCTGAGGAAGTGCTCCAGCTGG CAGATCTGCTCGGGTTCGATGTGGACTATACGTCAAGGAAGAGCATCGACAGTCTATATGCCGAGCAGCCAGAGA CGTTGCTGAAGTTCACTTATGGTGAGTTCCTGCCAATTTCTTGTGAGTGAGGACGGTTGCTGATGTGACGAGCAG TTACGCAGTTCTGGTCTGCGACGAAGAGGGAGTAA |