Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g1640.t1
Gene name
Location	scaffold_02:491207..493104
Strand	+
Gene length (bp)	1897
Transcript length (bp)	609
Coding sequence length (bp)	609
Protein length (aa)	203

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01466	Skp1	Skp1 family, dimerisation domain	7.1E-28	152	199
PF03931	Skp1_POZ	Skp1 family, tetramerisation domain	1.1E-22	46	106

GO

GO Term	Description	Terminal node
GO:0006511	ubiquitin-dependent protein catabolic process	Yes
GO:0044238	primary metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0051603	proteolysis involved in cellular protein catabolic process	No
GO:0044248	cellular catabolic process	No
GO:1901575	organic substance catabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0006508	proteolysis	No
GO:0044265	cellular macromolecule catabolic process	No
GO:0009057	macromolecule catabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0009056	catabolic process	No
GO:0044237	cellular metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0009987	cellular process	No
GO:0019941	modification-dependent protein catabolic process	No
GO:0008152	metabolic process	No
GO:0043632	modification-dependent macromolecule catabolic process	No
GO:0008150	biological_process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0019538	protein metabolic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1640.t1 MFRGSFQRTQARHTNFETWIFSFNKPTPFHAFSTLEPISNIITMSAITLTSSDGVDLSVERTTAERSVLIKNMLE DLGDSGEAIPIPNVNEAVLKKVIEWCEHHKNDPPSASDDDDNRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLD IKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEDR*
Coding	>Pro_DTO377G3_2\|g1640.t1 ATGTTTCGCGGAAGTTTTCAAAGGACGCAGGCGAGACACACCAACTTCGAAACCTGGATCTTTTCGTTCAATAAG CCTACACCTTTCCACGCTTTTTCTACGCTTGAACCCATCTCCAACATCATAACCATGAGTGCTATCACCCTCACC AGCTCCGATGGAGTCGATCTTTCCGTTGAACGCACCACTGCTGAGCGCTCCGTGCTGATCAAGAACATGCTTGAG GATCTCGGCGACTCTGGAGAAGCCATTCCCATTCCTAACGTTAACGAGGCCGTCCTCAAGAAGGTCATCGAGTGG TGCGAGCACCACAAGAACGACCCTCCTAGTGCTAGCGACGATGACGACAACCGTCGCAAGACCACTGACATCGAT GAGTGGGACCAGAAGTTCATGCAGGTGGATCAGGAGATGCTCTTCGAGATTATCCTTGCCGCCAACTACTTGGAT ATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAACATGATCAAGGGCAAATCCCCAGAGGAGATCCGC AAGACCTTCAACATCCAGAACGACTTTACTCCTGAGGAGGAGGATCAGATCCGCCGCGAGAACGAATGGGCTGAG GATCGTTAA
Transcript	>Pro_DTO377G3_2\|g1640.t1 ATGTTTCGCGGAAGTTTTCAAAGGACGCAGGCGAGACACACCAACTTCGAAACCTGGATCTTTTCGTTCAATAAG CCTACACCTTTCCACGCTTTTTCTACGCTTGAACCCATCTCCAACATCATAACCATGAGTGCTATCACCCTCACC AGCTCCGATGGAGTCGATCTTTCCGTTGAACGCACCACTGCTGAGCGCTCCGTGCTGATCAAGAACATGCTTGAG GATCTCGGCGACTCTGGAGAAGCCATTCCCATTCCTAACGTTAACGAGGCCGTCCTCAAGAAGGTCATCGAGTGG TGCGAGCACCACAAGAACGACCCTCCTAGTGCTAGCGACGATGACGACAACCGTCGCAAGACCACTGACATCGAT GAGTGGGACCAGAAGTTCATGCAGGTGGATCAGGAGATGCTCTTCGAGATTATCCTTGCCGCCAACTACTTGGAT ATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAACATGATCAAGGGCAAATCCCCAGAGGAGATCCGC AAGACCTTCAACATCCAGAACGACTTTACTCCTGAGGAGGAGGATCAGATCCGCCGCGAGAACGAATGGGCTGAG GATCGTTAA
Gene	>Pro_DTO377G3_2\|g1640.t1 ATGTTTCGCGGAAGTTTTCAAAGGACGCAGGCGAGGTAATAGAGAAGCTCTGCCATAAAACAAACACCATCGCTC TTATATTTCATTCATAAACCGATTTGTGAGCCTAATGAGGCATACTCCTAGCCCTTTTATATAGTTACTGTTCTA CTATGATGGTTAGTTTTTCTAACACGTTACTTTATGCTGTGACATCATACAAGCACTTATTGTACCTCTTTCGCG CTTGGGCCATTCCCAATTGTGCTTCACTGCAGCGACCAGCCCTTAAATTTGCCCGCCTGACCAGAAGATATCGTA AATCTGTCCTAATTGGAAGGAATCGAAGTAGACGTAGTAAGGCGACTTCCTATGAAACACATGTTTGAAGCACGG GTCTGAAGTGTTCCCATGGATAGACGGATTTTGTCCGTAACTACTTTAGGTTGACTAGAAGAGGTTGTAGTTTGT TCGTGTATGGATAATTAGAACAGAGCAGGATCATATCCGGCTGGTCAAATCCATTTTCAATAGGGTTGTCTTTGA GGGAAGCCTCGATGTCGATATCTAGATCCTTCGAGAATATAGATCCATACATGTTTAGCTTAGTACTTGGACAAT CTACTCCGTACAAAGAATATAATTCAGAAATACATTACACCTTTTACCAAAATACAAATTCCAGCCGCCCAGATT CTTATTTCAGCCCGTAAATACGGACAGCCGCCGTTGGTTCTGGCTTAGTACGGAGTCAAGCCAGCGCTTCCAAGG TTGCATTCCCAACTGTTGGCTCAAGTCACAGGCTACTAGTCTGTTTTTGACCAGGTTCTCGTTTCTTTAAATCAA AAGAATGAGTCAAAGCAAATAATTGGTCTGATTTAGGCAACGGTCCGAAACTAAGACGTGGGGGCTGGCTTTGTA GCCTTGTGAGCCTTATTGGCTTTATGGATACCGACCGCCTTTGGTAACTTAGAACTCCCTAAACCTCATCACCCG CCATCTACTCGTTACGTCTTCGTCATTTTCAACCTGCAACTTCTCTCTTCAGACACACCAACTTCGAAACCTGGA TCTTTTCGTTCAATAAGCCTACACCTTTCCACGCTTTTTCTACGCTTGGTCAGTAACATCGCCACCACCGAACGC CCCGCACTACTCGAAAACGACCAGCAACACTAACTTCAGAACATTAGAACCCATCTCCAACATCATAACCATGAG TGCTATCACCCTCACCAGCTCCGATGGAGTCGATCTTTCCGTTGGTAGGCATAATTTCCACAGCAGTCGCGAGTG GAGCTGACAGATTCCGAACAGAACGCACCACTGCTGAGCGCTCCGTGCTGATCAAGAACATGCTTGAGGATCTCG GCGACTCTGGAGAAGCCATTCCCATTCCTAACGTGAGTGTCTATTTCCGAGCATAGCCACCATCCAAGATCAGCC GCTTACACCTCTTTGTCCAGGTTAACGAGGCCGTCCTCAAGAAGGTCATCGAGTGGTGCGAGCACCACAAGAACG ACCCTCCTAGTGCTAGCGACGATGACGACAACCGTCGCAAGACCACTGACATCGATGAGTGGGACCAGAAGTTCA TGCAGGTGGATCAGGAGATGCTCTTCGAGATTATCCTTGTACGTTCCGTTTGCAGACTTGTTCTTCGGTACATTT ACTGACTGTTCATAGGCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACGACTTTACTCCTGAGGAGGAG GATCAGATCCGCCGCGAGAACGAATGGGCTGAGGAGTAAGTTGCCACCACCGTATCCATTGATTGAATCTATGCT GACATCCTGCGCTAGTCGTTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences