Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g161.t1
Gene name
Locationscaffold_01:422244..423346
Strand-
Gene length (bp)1102
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01379 Porphobil_deam Porphobilinogen deaminase, dipyromethane cofactor binding domain 5.5E-72 12 224
PF03900 Porphobil_deamC Porphobilinogen deaminase, C-terminal domain 7.2E-17 238 315

GO

GO Term Description Terminal node
GO:0033014 tetrapyrrole biosynthetic process Yes
GO:0004418 hydroxymethylbilane synthase activity Yes
GO:1901566 organonitrogen compound biosynthetic process No
GO:1901564 organonitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0046483 heterocycle metabolic process No
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups No
GO:0016740 transferase activity No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0003824 catalytic activity No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0033013 tetrapyrrole metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0009058 biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g161.t1
MTTPAPTKKTFTIGTRKSKLALLQTDLVLEALKKAFPQYEYKVFSKETTGDLNTTIALRDFTTKNLWTEELEELM
INGQVDLIVHSLKDVPTTLPSSCKLGPTMPREDSRDVLVVKQGLPYKSLSEIPAGSVVGTSSIRRTAQLAQKYPH
LKVQDVRGNIGTRLSKLDAEDSPYTCVILAAAGLLRLDLTDRITQYLDSKNSGMLYAVGQGALGIEIRKEDAVLQ
NMLDTIGDQDTTFSVLAERSLLRTLEGGCSAPLGVETEWVQNAQGAKQLRMRSVVVSVDGKECAQVELEADVTSA
ESAEAFGVTVAKALVADGAGDILEAIQQNKAKETVSTAV*
Coding >Pro_DTO377G3_2|g161.t1
ATGACTACCCCCGCCCCCACCAAAAAGACCTTTACCATCGGCACCCGCAAATCTAAACTGGCTCTGCTCCAGACA
GATTTAGTCCTCGAGGCATTGAAGAAAGCATTCCCGCAATATGAATATAAGGTATTCTCCAAGGAGACAACCGGT
GACCTGAACACCACTATCGCACTACGGGATTTCACCACCAAGAACCTGTGGACGGAGGAATTGGAGGAATTGATG
ATCAACGGACAGGTCGATCTTATCGTCCACTCGCTGAAAGATGTCCCCACTACTCTCCCCTCTTCCTGCAAGCTA
GGCCCGACTATGCCCCGCGAAGATAGCAGGGATGTACTTGTGGTGAAACAAGGGTTGCCATACAAAAGTCTTTCC
GAGATCCCCGCCGGGTCCGTAGTTGGAACCTCGTCCATCCGCCGCACAGCACAGTTGGCCCAGAAATACCCCCAC
CTGAAAGTCCAGGATGTCCGTGGTAACATCGGCACTCGCCTATCAAAGCTAGATGCTGAAGATAGCCCGTACACA
TGTGTCATTCTTGCCGCTGCTGGTCTGCTGCGTCTTGATTTGACGGATCGTATCACCCAATATTTGGACTCCAAA
AACAGCGGCATGCTCTATGCTGTCGGACAGGGTGCCCTTGGCATCGAAATTCGCAAGGAAGACGCTGTTTTGCAG
AATATGTTGGACACGATTGGTGATCAAGATACCACATTCTCGGTCTTGGCTGAGCGCAGTCTTTTGCGGACTCTT
GAGGGAGGCTGCAGTGCCCCGCTAGGCGTTGAAACCGAATGGGTCCAAAATGCGCAGGGTGCCAAGCAGTTGCGA
ATGCGGTCTGTGGTCGTCAGTGTCGATGGCAAAGAATGTGCTCAGGTAGAATTGGAAGCCGACGTCACCTCTGCT
GAAAGTGCTGAGGCCTTCGGCGTCACCGTAGCCAAGGCCCTGGTCGCCGACGGCGCTGGAGACATTCTCGAGGCT
ATCCAACAGAACAAGGCCAAGGAGACTGTTTCCACTGCAGTCTGA
Transcript >Pro_DTO377G3_2|g161.t1
ATGACTACCCCCGCCCCCACCAAAAAGACCTTTACCATCGGCACCCGCAAATCTAAACTGGCTCTGCTCCAGACA
GATTTAGTCCTCGAGGCATTGAAGAAAGCATTCCCGCAATATGAATATAAGGTATTCTCCAAGGAGACAACCGGT
GACCTGAACACCACTATCGCACTACGGGATTTCACCACCAAGAACCTGTGGACGGAGGAATTGGAGGAATTGATG
ATCAACGGACAGGTCGATCTTATCGTCCACTCGCTGAAAGATGTCCCCACTACTCTCCCCTCTTCCTGCAAGCTA
GGCCCGACTATGCCCCGCGAAGATAGCAGGGATGTACTTGTGGTGAAACAAGGGTTGCCATACAAAAGTCTTTCC
GAGATCCCCGCCGGGTCCGTAGTTGGAACCTCGTCCATCCGCCGCACAGCACAGTTGGCCCAGAAATACCCCCAC
CTGAAAGTCCAGGATGTCCGTGGTAACATCGGCACTCGCCTATCAAAGCTAGATGCTGAAGATAGCCCGTACACA
TGTGTCATTCTTGCCGCTGCTGGTCTGCTGCGTCTTGATTTGACGGATCGTATCACCCAATATTTGGACTCCAAA
AACAGCGGCATGCTCTATGCTGTCGGACAGGGTGCCCTTGGCATCGAAATTCGCAAGGAAGACGCTGTTTTGCAG
AATATGTTGGACACGATTGGTGATCAAGATACCACATTCTCGGTCTTGGCTGAGCGCAGTCTTTTGCGGACTCTT
GAGGGAGGCTGCAGTGCCCCGCTAGGCGTTGAAACCGAATGGGTCCAAAATGCGCAGGGTGCCAAGCAGTTGCGA
ATGCGGTCTGTGGTCGTCAGTGTCGATGGCAAAGAATGTGCTCAGGTAGAATTGGAAGCCGACGTCACCTCTGCT
GAAAGTGCTGAGGCCTTCGGCGTCACCGTAGCCAAGGCCCTGGTCGCCGACGGCGCTGGAGACATTCTCGAGGCT
ATCCAACAGAACAAGGCCAAGGAGACTGTTTCCACTGCAGTCTGA
Gene >Pro_DTO377G3_2|g161.t1
ATGACTACCCCCGCCCCCACCAAAAAGACCTTTACCATCGGCACCCGCAAATCTAAACTGGCTCTGCTCCAGACA
GATTTAGTCCTCGAGGCATTGAAGAAAGCATTCCCGCAATATGAATATAAGGTATTCTCCAAGGAGACAACCGGT
GACCTGAACACCACTATCGCACTACGGGATTTCACCACCAAGAACCTGTGGACGGAGGAATTGGAGGAATTGATG
ATCAACGGACAGGTCGATCTTATCGTCCACTCGCTGAAAGGTCTGATAATATCCCAATCTCACACAGAGTAGCTG
TTTCTACCCTAAAAAAGAGCTGACGACGACTTATGCAATCTTATCAGATGTCCCCACTACTCTCCCCTCTTCCTG
CAAGCTAGGCCCGACTATGCCCCGCGAAGATAGCAGGGATGTACTTGTGGTGAAACAAGGGTTGCCATACAAAAG
TCTTTCCGAGATCCCCGCCGGGTCCGTAGTTGGAACCTCGTCCATCCGCCGCACAGCACAGTTGGCCCAGAAATA
CCCCCACCTGAAAGTCCAGGATGTCCGTGGTAACATCGGCACTCGCCTATCAAAGCTAGATGCTGAAGATAGCCC
GTACACATGTGTCATTCTTGCCGCTGCTGGTCTGCTGCGTCTTGATTTGACGGATCGTATCACCCAATATTTGGA
CTCCAAAAACAGCGGCATGCTCTATGCTGTCGGACAGGGTGCCCTTGGCATCGAAATTCGCAAGGAAGACGCTGT
TTTGCAGAATATGTTGGACACGATTGGTGATCAAGATACCACATTCTCGGTCTTGGCTGAGCGCAGTCTTTTGCG
GACTCTTGAGGGAGGCTGCAGTGCCCCGCTAGGCGTTGAAACCGAATGGGTCCAAAATGCGCAGGGTGCCAAGCA
GTTGCGAATGCGGTCTGTGGTCGTCAGTGTCGATGGCAAAGAATGTGCTCAGGTAGAATTGGAAGCCGACGTCAC
CTCTGCTGAAAGTGCTGAGGCCTTCGGCGTCACCGTAGCCAAGGCCCTGGTCGCCGACGGCGCTGGAGACATTCT
CGAGGCTATCCAACAGAACAAGGCCAAGGAGACTGTTTCCACTGCAGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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