Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g1606.t1
Gene name
Location	scaffold_02:392880..394336
Strand	-
Gene length (bp)	1456
Transcript length (bp)	1215
Coding sequence length (bp)	1215
Protein length (aa)	405

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10354	BMT5-like	rRNA (uridine-N3-)-methyltransferase BTM5-like	1.3E-64	71	352

GO

GO Term	Description	Terminal node
GO:0070475	rRNA base methylation	Yes
GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	Yes
GO:0071704	organic substance metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0009451	RNA modification	No
GO:0031167	rRNA methylation	No
GO:0008152	metabolic process	No
GO:0001510	RNA methylation	No
GO:0043170	macromolecule metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0008168	methyltransferase activity	No
GO:0016740	transferase activity	No
GO:0046483	heterocycle metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0016741	transferase activity, transferring one-carbon groups	No
GO:0008150	biological_process	No
GO:0006396	RNA processing	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0016436	rRNA (uridine) methyltransferase activity	No
GO:0003824	catalytic activity	No
GO:0008173	RNA methyltransferase activity	No
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	No
GO:0034470	ncRNA processing	No
GO:0043414	macromolecule methylation	No
GO:0034660	ncRNA metabolic process	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:0044238	primary metabolic process	No
GO:0009987	cellular process	No
GO:0044237	cellular metabolic process	No
GO:0008649	rRNA methyltransferase activity	No
GO:0090304	nucleic acid metabolic process	No
GO:0043412	macromolecule modification	No
GO:0008170	N-methyltransferase activity	No
GO:0016072	rRNA metabolic process	No
GO:0140098	catalytic activity, acting on RNA	No
GO:0006364	rRNA processing	No
GO:0032259	methylation	No
GO:0006807	nitrogen compound metabolic process	No
GO:0000154	rRNA modification	No
GO:0003674	molecular_function	No
GO:0140102	catalytic activity, acting on a rRNA	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 15	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1606.t1 MPRNNKKVKNAPPPRARGPGKPSGPSSNPAKGQQHGNGQKQGSGNANPPKKASMQANQRPIVPFLRKDRILLIGE GDFSFARSLAKQYKCRNLCATCYDSKEVLYNKYPQAPQNVSDILSASAKSKLASNETENQPEESKSEDQDSTNPN PSANPNQQTPKVVFSVDARKLGAPAGGGKEIRTGFARRERKRPAWYQKDEPAGPPYQPGGAWDVICFNFPHVGGL STDVNRQVRSNQELLVAFFKACIPLVSKPPPLMDADDDEWVYADGEESEEEDEDEDEEGGEGQELGKDDDTTGKG FRTGPGQILVTLFEGEPYTLWNIRDLARHAGLVVVTSFRFPWTSYEGYSHARTVGHIEGKDGERGGWKGEDREAR MYVFEVKQKEPVKKGGKKRSRDDDSSDSE*
Coding	>Pro_DTO377G3_2\|g1606.t1 ATGCCTCGCAATAACAAGAAAGTCAAAAATGCCCCTCCGCCGCGCGCTCGCGGACCAGGCAAACCATCTGGCCCG TCTTCCAACCCTGCCAAGGGACAGCAGCATGGCAATGGGCAAAAGCAGGGAAGTGGTAATGCCAACCCACCTAAG AAAGCCTCCATGCAGGCGAACCAGAGACCTATCGTGCCGTTTTTAAGGAAGGATCGAATCCTCCTTATTGGTGAA GGTGACTTCTCATTCGCCCGTTCTCTTGCAAAACAATACAAGTGCCGCAACCTATGCGCCACATGCTACGATTCC AAAGAAGTGCTATACAACAAGTACCCGCAAGCTCCTCAGAACGTCTCAGATATCCTGAGCGCATCAGCAAAGTCA AAACTAGCAAGCAACGAGACCGAAAACCAGCCAGAAGAAAGCAAATCCGAAGACCAGGACTCAACCAACCCCAAC CCCAGTGCCAATCCCAACCAGCAAACCCCCAAAGTCGTCTTCTCGGTGGACGCGCGCAAACTCGGCGCTCCGGCA GGCGGCGGCAAGGAAATCCGCACAGGATTCGCACGCCGCGAGCGCAAGAGACCAGCCTGGTACCAGAAAGACGAG CCAGCAGGACCACCGTACCAGCCCGGTGGGGCGTGGGATGTGATCTGCTTCAATTTCCCGCATGTGGGTGGGCTT TCTACGGATGTGAACCGACAGGTTCGTTCGAATCAGGAGCTGCTGGTTGCATTCTTCAAGGCGTGTATACCGCTT GTTTCGAAGCCGCCGCCGCTTATGGATGCTGATGATGATGAGTGGGTGTATGCAGATGGAGAGGAGAGTGAAGAA GAAGATGAGGATGAGGATGAGGAAGGAGGAGAGGGCCAGGAGCTAGGAAAAGACGATGATACTACCGGGAAGGGA TTCCGGACTGGGCCTGGTCAGATCCTTGTTACTCTGTTCGAGGGTGAGCCATATACGCTTTGGAATATTAGGGAT TTGGCGAGGCATGCGGGGCTGGTTGTTGTGACTAGTTTCCGGTTTCCTTGGACTTCTTATGAGGGCTATTCTCAT GCGAGAACGGTAGGGCATATTGAAGGAAAGGATGGGGAGCGCGGCGGATGGAAGGGAGAGGATCGGGAGGCTCGG ATGTATGTCTTTGAAGTGAAGCAGAAGGAGCCGGTCAAGAAGGGAGGGAAGAAGAGAAGCCGCGATGATGATTCT AGTGATAGCGAGTAA
Transcript	>Pro_DTO377G3_2\|g1606.t1 ATGCCTCGCAATAACAAGAAAGTCAAAAATGCCCCTCCGCCGCGCGCTCGCGGACCAGGCAAACCATCTGGCCCG TCTTCCAACCCTGCCAAGGGACAGCAGCATGGCAATGGGCAAAAGCAGGGAAGTGGTAATGCCAACCCACCTAAG AAAGCCTCCATGCAGGCGAACCAGAGACCTATCGTGCCGTTTTTAAGGAAGGATCGAATCCTCCTTATTGGTGAA GGTGACTTCTCATTCGCCCGTTCTCTTGCAAAACAATACAAGTGCCGCAACCTATGCGCCACATGCTACGATTCC AAAGAAGTGCTATACAACAAGTACCCGCAAGCTCCTCAGAACGTCTCAGATATCCTGAGCGCATCAGCAAAGTCA AAACTAGCAAGCAACGAGACCGAAAACCAGCCAGAAGAAAGCAAATCCGAAGACCAGGACTCAACCAACCCCAAC CCCAGTGCCAATCCCAACCAGCAAACCCCCAAAGTCGTCTTCTCGGTGGACGCGCGCAAACTCGGCGCTCCGGCA GGCGGCGGCAAGGAAATCCGCACAGGATTCGCACGCCGCGAGCGCAAGAGACCAGCCTGGTACCAGAAAGACGAG CCAGCAGGACCACCGTACCAGCCCGGTGGGGCGTGGGATGTGATCTGCTTCAATTTCCCGCATGTGGGTGGGCTT TCTACGGATGTGAACCGACAGGTTCGTTCGAATCAGGAGCTGCTGGTTGCATTCTTCAAGGCGTGTATACCGCTT GTTTCGAAGCCGCCGCCGCTTATGGATGCTGATGATGATGAGTGGGTGTATGCAGATGGAGAGGAGAGTGAAGAA GAAGATGAGGATGAGGATGAGGAAGGAGGAGAGGGCCAGGAGCTAGGAAAAGACGATGATACTACCGGGAAGGGA TTCCGGACTGGGCCTGGTCAGATCCTTGTTACTCTGTTCGAGGGTGAGCCATATACGCTTTGGAATATTAGGGAT TTGGCGAGGCATGCGGGGCTGGTTGTTGTGACTAGTTTCCGGTTTCCTTGGACTTCTTATGAGGGCTATTCTCAT GCGAGAACGGTAGGGCATATTGAAGGAAAGGATGGGGAGCGCGGCGGATGGAAGGGAGAGGATCGGGAGGCTCGG ATGTATGTCTTTGAAGTGAAGCAGAAGGAGCCGGTCAAGAAGGGAGGGAAGAAGAGAAGCCGCGATGATGATTCT AGTGATAGCGAGTAA
Gene	>Pro_DTO377G3_2\|g1606.t1 ATGCCTCGCAATAACAAGAAAGTCAAAAATGCCCCTCCGCCGCGCGCTCGCGGACCAGGCAAACCATCTGGCCCG TCTTCCAACCCTGCCAAGGGACAGCAGCATGGCAATGGGCAAAAGCAGGGAAGTGGTAATGCCAACCCACCTAAG AAAGCCTCCATGCAGGCGAACCAGAGACCTATCGTGCCGTTTTTAAGGAAGGATCGAATCCTCCTTATTGGTGAA GGTGAGCTTTTCTTCTGATTTAGTTGACATGATTGCGCTGCGTTCTTCATTCTATGCAAGAATTTGGTTGCAATT AAGCTATATATGTATATTTTCCCATGGAGTCTATACCCAGAGCACTTTTACTGTGATATACGAGATTGGAACCAA TATGCATTCCTGTATAAGAACAAGATCATGTAACACGCTTCAACACCGATTTATCTATTACACCTGGAAACATAA ATTCTAACAGCAACCAGGTGACTTCTCATTCGCCCGTTCTCTTGCAAAACAATACAAGTGCCGCAACCTATGCGC CACATGCTACGATTCCAAAGAAGTGCTATACAACAAGTACCCGCAAGCTCCTCAGAACGTCTCAGATATCCTGAG CGCATCAGCAAAGTCAAAACTAGCAAGCAACGAGACCGAAAACCAGCCAGAAGAAAGCAAATCCGAAGACCAGGA CTCAACCAACCCCAACCCCAGTGCCAATCCCAACCAGCAAACCCCCAAAGTCGTCTTCTCGGTGGACGCGCGCAA ACTCGGCGCTCCGGCAGGCGGCGGCAAGGAAATCCGCACAGGATTCGCACGCCGCGAGCGCAAGAGACCAGCCTG GTACCAGAAAGACGAGCCAGCAGGACCACCGTACCAGCCCGGTGGGGCGTGGGATGTGATCTGCTTCAATTTCCC GCATGTGGGTGGGCTTTCTACGGATGTGAACCGACAGGTTCGTTCGAATCAGGAGCTGCTGGTTGCATTCTTCAA GGCGTGTATACCGCTTGTTTCGAAGCCGCCGCCGCTTATGGATGCTGATGATGATGAGTGGGTGTATGCAGATGG AGAGGAGAGTGAAGAAGAAGATGAGGATGAGGATGAGGAAGGAGGAGAGGGCCAGGAGCTAGGAAAAGACGATGA TACTACCGGGAAGGGATTCCGGACTGGGCCTGGTCAGATCCTTGTTACTCTGTTCGAGGGTGAGCCATATACGCT TTGGAATATTAGGGATTTGGCGAGGCATGCGGGGCTGGTTGTTGTGACTAGTTTCCGGTTTCCTTGGACTTCTTA TGAGGGCTATTCTCATGCGAGAACGGTAGGGCATATTGAAGGAAAGGATGGGGAGCGCGGCGGATGGAAGGGAGA GGATCGGGAGGCTCGGATGTATGTCTTTGAAGTGAAGCAGAAGGAGCCGGTCAAGAAGGGAGGGAAGAAGAGAAG CCGCGATGATGATTCTAGTGATAGCGAGTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences