Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g1588.t1
Gene name
Location	scaffold_02:355444..356922
Strand	+
Gene length (bp)	1478
Transcript length (bp)	1227
Coding sequence length (bp)	1227
Protein length (aa)	409

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00956	NAP	Nucleosome assembly protein (NAP)	1.8E-98	88	345

GO

GO Term	Description	Terminal node
GO:0005634	nucleus	Yes
GO:0006334	nucleosome assembly	Yes
GO:0043933	protein-containing complex organization	No
GO:0071824	protein-DNA complex subunit organization	No
GO:0008150	biological_process	No
GO:0005575	cellular_component	No
GO:0065003	protein-containing complex assembly	No
GO:0016043	cellular component organization	No
GO:0065004	protein-DNA complex assembly	No
GO:0043227	membrane-bounded organelle	No
GO:0071840	cellular component organization or biogenesis	No
GO:0043229	intracellular organelle	No
GO:0034728	nucleosome organization	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0006325	chromatin organization	No
GO:0022607	cellular component assembly	No
GO:0110165	cellular anatomical entity	No
GO:0043226	organelle	No
GO:0006338	chromatin remodeling	No
GO:0009987	cellular process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1588.t1 MSEPIRNKKADFPVAPTPQNTPANNAPISSHAQQPGVSSIEEETFDKATAASLFARNPALVSMIQGKLGQLVGRS SGYIESLPPSVRRRVAGLKGIQKEHSKLEAQFQEEVLELEKKYFGKFTPLYQRRSTIINGGIEPTEAEVEAGKED EESDEEETKEEPKKEEGEAAKGIPEFWLSAMKNQISLAEMITERDEEALKHLTDIRMEYLDRPGFRLIFEFSENE FFTNKTISKSYFYKDESGYGGDFIYDHADGSQIDWKEDQDLTLRLESKKQRNKNTKQTRVVKISVPTESFFNFFS PPQPPAEDDDSVASDIEERLELDYQLGEDIKEKLIPRAIDWFTGEALQFEELGEDLEGDEFEDDDDEDEDEDEDE EELGSDREVDEEDTDEEDGTSKPKKEAAECKQN*
Coding	>Pro_DTO377G3_2\|g1588.t1 ATGTCTGAGCCCATCAGAAATAAGAAGGCGGACTTCCCGGTCGCACCGACCCCGCAAAACACGCCGGCCAACAAT GCTCCTATCTCATCTCACGCCCAGCAGCCTGGTGTATCCAGCATCGAGGAGGAAACCTTTGACAAAGCTACGGCT GCCTCGCTCTTTGCTCGCAACCCTGCTTTGGTATCCATGATCCAAGGCAAGTTGGGTCAACTCGTCGGCCGCTCG TCAGGCTACATCGAATCTCTCCCCCCCTCCGTCCGCCGCCGTGTCGCTGGATTGAAGGGTATCCAGAAGGAGCAC TCCAAGCTCGAGGCCCAGTTCCAAGAGGAGGTTCTGGAACTTGAGAAGAAGTACTTCGGCAAGTTCACGCCCCTG TACCAGCGTCGTTCTACTATTATCAACGGCGGCATCGAGCCGACCGAGGCCGAGGTTGAGGCCGGAAAGGAGGAC GAGGAGAGTGATGAGGAGGAGACTAAGGAGGAGCCCAAGAAGGAGGAGGGCGAGGCCGCGAAGGGCATCCCCGAA TTCTGGCTTTCTGCCATGAAGAACCAAATCTCGCTGGCTGAGATGATCACCGAGCGCGATGAGGAGGCTCTCAAG CACCTCACCGACATTCGCATGGAGTACCTTGACCGACCCGGATTCCGCCTCATTTTCGAGTTCTCTGAGAACGAG TTCTTCACCAACAAAACTATCTCCAAGTCATACTTCTACAAGGATGAGAGTGGATACGGTGGCGATTTCATTTAC GACCACGCCGATGGATCCCAGATTGACTGGAAGGAGGACCAAGACCTGACCCTCCGCCTGGAGAGCAAGAAGCAG CGCAACAAGAACACCAAGCAGACCCGCGTTGTTAAGATCAGTGTGCCTACCGAGTCCTTCTTCAACTTCTTCTCA CCCCCACAGCCACCTGCCGAGGATGACGATTCAGTCGCCAGCGACATTGAAGAGCGTCTGGAGCTTGATTATCAG CTCGGTGAGGATATTAAGGAGAAGCTCATTCCCCGTGCCATTGACTGGTTCACCGGTGAAGCTCTCCAGTTCGAG GAGCTCGGTGAGGATCTGGAGGGTGATGAGTTTGAGGATGACGATGACGAGGATGAGGATGAAGATGAGGACGAG GAGGAGCTCGGGTCAGACCGTGAAGTGGACGAGGAGGACACAGACGAAGAGGATGGTACTTCCAAGCCCAAGAAG GAGGCCGCCGAGTGCAAGCAAAACTAA
Transcript	>Pro_DTO377G3_2\|g1588.t1 ATGTCTGAGCCCATCAGAAATAAGAAGGCGGACTTCCCGGTCGCACCGACCCCGCAAAACACGCCGGCCAACAAT GCTCCTATCTCATCTCACGCCCAGCAGCCTGGTGTATCCAGCATCGAGGAGGAAACCTTTGACAAAGCTACGGCT GCCTCGCTCTTTGCTCGCAACCCTGCTTTGGTATCCATGATCCAAGGCAAGTTGGGTCAACTCGTCGGCCGCTCG TCAGGCTACATCGAATCTCTCCCCCCCTCCGTCCGCCGCCGTGTCGCTGGATTGAAGGGTATCCAGAAGGAGCAC TCCAAGCTCGAGGCCCAGTTCCAAGAGGAGGTTCTGGAACTTGAGAAGAAGTACTTCGGCAAGTTCACGCCCCTG TACCAGCGTCGTTCTACTATTATCAACGGCGGCATCGAGCCGACCGAGGCCGAGGTTGAGGCCGGAAAGGAGGAC GAGGAGAGTGATGAGGAGGAGACTAAGGAGGAGCCCAAGAAGGAGGAGGGCGAGGCCGCGAAGGGCATCCCCGAA TTCTGGCTTTCTGCCATGAAGAACCAAATCTCGCTGGCTGAGATGATCACCGAGCGCGATGAGGAGGCTCTCAAG CACCTCACCGACATTCGCATGGAGTACCTTGACCGACCCGGATTCCGCCTCATTTTCGAGTTCTCTGAGAACGAG TTCTTCACCAACAAAACTATCTCCAAGTCATACTTCTACAAGGATGAGAGTGGATACGGTGGCGATTTCATTTAC GACCACGCCGATGGATCCCAGATTGACTGGAAGGAGGACCAAGACCTGACCCTCCGCCTGGAGAGCAAGAAGCAG CGCAACAAGAACACCAAGCAGACCCGCGTTGTTAAGATCAGTGTGCCTACCGAGTCCTTCTTCAACTTCTTCTCA CCCCCACAGCCACCTGCCGAGGATGACGATTCAGTCGCCAGCGACATTGAAGAGCGTCTGGAGCTTGATTATCAG CTCGGTGAGGATATTAAGGAGAAGCTCATTCCCCGTGCCATTGACTGGTTCACCGGTGAAGCTCTCCAGTTCGAG GAGCTCGGTGAGGATCTGGAGGGTGATGAGTTTGAGGATGACGATGACGAGGATGAGGATGAAGATGAGGACGAG GAGGAGCTCGGGTCAGACCGTGAAGTGGACGAGGAGGACACAGACGAAGAGGATGGTACTTCCAAGCCCAAGAAG GAGGCCGCCGAGTGCAAGCAAAACTAA
Gene	>Pro_DTO377G3_2\|g1588.t1 ATGTCTGAGCCCATCAGAAATAAGAAGGCGGACTTCCCGGTCGCACCGTAAGCATCCCCCCTCCTCCCGTTTTTT TTTCCCACCCTTATCAAAAGCAAAAAAAAAAAACATGGATGCTGACTTGCAGAAGGACCCCGCAAAACACGCCGG CCAACAATGCTCCTATCTCATCTCACGCCCAGCAGCCTGGTGTATCCAGCATCGAGGAGGGTAAGTCATCTCTTT TCTCGTATTCACCGACATTTCTTTGACCGTGCTTTCTGTTCTAGAAACCTTTGACAAAGCTACGGCTGCCTCGCT CTTTGCTCGCAACCCTGCTTTGGTATCCATGATCCAAGGCAAGTTGGGTCAACTCGTCGGCCGCTCGTCAGGCTA CATCGAATCTCTCCCCCCCTCCGTCCGCCGCCGTGTCGCTGGATTGAAGGGTATCCAGAAGGAGCACTCCAAGCT CGAGGCCCAGTTCCAAGAGGAGGTTCTGGAACTTGAGAAGAAGTACTTCGGCAAGTTCACGCCCCTGTACCAGCG TCGTTCTACTATTATCAACGGCGGCATCGAGCCGACCGAGGCCGAGGTTGAGGCCGGAAAGGAGGACGAGGAGAG TGATGAGGAGGAGACTAAGGAGGAGCCCAAGAAGGAGGAGGGCGAGGCCGCGAAGGGCATCCCCGAATTCTGGCT TTCTGCCATGAAGAACCAAATCTCGCTGGCTGAGATGATCACCGAGCGCGATGAGGAGGCTCTCAAGCACCTCAC CGACATTCGCATGGAGTACCTTGACCGACCCGGATTCCGCCTCATTTTCGAGTTCTCTGAGAACGAGTTCTTCAC CAACAAAACTATCTCCAAGTCATACTTCTACAAGGATGAGAGTGGATACGGTGGCGATTTCATTTACGACCACGC CGATGGATCCCAGATTGACTGGAAGGAGGACCAAGACCTGACCCTCCGCCTGGAGAGCAAGAAGCAGCGCAACAA GAGTAAGTCCACTCGAATATTGAGATGCCATGTTGAAACTGACAGCTGACGCTCCTTTAGACACCAAGCAGACCC GCGTTGTTAAGATCAGTGTGCCTACCGAGTCCTTCTTCAACTTCTTCTCACCCCCACAGCCACCTGCCGAGGATG ACGATTCAGTCGCCAGCGACATTGAAGAGCGTCTGGAGCTTGATTATCAGCTCGGTGAGGATATTAAGGAGAAGC TCATTCCCCGTGCCATTGACTGGTTCACCGGTGAAGCTCTCCAGTTCGAGGAGCTCGGTGAGGATCTGGAGGGTG ATGAGTTTGAGGATGACGATGACGAGGATGAGGATGAAGATGAGGACGAGGAGGAGCTCGGGTCAGACCGTGAAG TGGACGAGGAGGACACAGACGAAGAGGTATGGCATACCACACTCACCGACTCAGATCACTTGCTAACTTCGTTCC AGGATGGTACTTCCAAGCCCAAGAAGGAGGCCGCCGAGTGCAAGCAAAACTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences