© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1571.t1 |
| Gene name | |
| Location | scaffold_02:315367..317321 |
| Strand | - |
| Gene length (bp) | 1954 |
| Transcript length (bp) | 1668 |
| Coding sequence length (bp) | 1668 |
| Protein length (aa) | 556 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 7.4E-114 | 42 | 512 |
| PF13520 | AA_permease_2 | Amino acid permease | 1.1E-38 | 45 | 464 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 43 | 65 | 22 |
| 2 | 80 | 102 | 22 |
| 3 | 122 | 144 | 22 |
| 4 | 154 | 176 | 22 |
| 5 | 183 | 205 | 22 |
| 6 | 235 | 257 | 22 |
| 7 | 277 | 299 | 22 |
| 8 | 329 | 351 | 22 |
| 9 | 372 | 394 | 22 |
| 10 | 409 | 428 | 19 |
| 11 | 448 | 470 | 22 |
| 12 | 485 | 503 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1571.t1 MGHPDEINTIEAQPEYFDNSGDFKEGEQDEPVKLHRELKARHISMIAIGGAIGTGLVVGTGSALTAGPGSLLIAY CFMGFVVWTVMCGLGEMAAWLPLSSGFTGYAGRFCDPALGFTLGWCYYLKYIILPPTQLTAAALVITYWPRTSAE NVNPGVWIAIFMVAIILINCFGVKIFGEMEFWLSSFKVIVILGIILCTFIFALGGGPDHDRRGFRYWNEPGAFAT KYTEGSLGKFLAFWSTLVQATFAFLGTELIGVTVGEAQNPRKTIPKAIKLTFWRIIVFYILSVLFLGMLVPYNSP DLVFATKAKSSAAASPFVVAMKQVAALPHIINGCILVFVFSAANSDLYIATRTLYGLARERKAPRIFARTNQAGV PVYALGLSASFCLLAFMSVSNGSKEVFGYFTDMVSIFGLLTWISLLITHIFFIRARRAQGVDEATLAYKAPLGIT GSCIALFFSVLVAFTRSFGVFIHNPEKYGNFDYKTFITSYIGIPLYVMAFAGWKIWKRTEFVKPHNADIWTGKAE IDREEAEYVAMMAIENQNMPRWKKIYTALV* |
| Coding | >Pro_DTO377G3_2|g1571.t1 ATGGGTCATCCCGATGAGATTAACACTATCGAGGCGCAGCCTGAGTACTTTGACAACTCGGGGGATTTCAAAGAA GGTGAACAGGATGAGCCAGTCAAGCTTCACAGAGAGCTCAAGGCTCGTCACATTTCCATGATTGCCATCGGTGGC GCCATTGGTACTGGATTGGTTGTTGGTACTGGCAGCGCTTTAACCGCCGGACCTGGATCTTTGCTTATTGCATAC TGCTTTATGGGTTTCGTTGTCTGGACCGTCATGTGTGGACTGGGTGAAATGGCTGCTTGGCTACCATTGTCCTCC GGTTTCACTGGTTACGCTGGCCGTTTCTGTGACCCTGCTCTCGGATTCACTCTCGGATGGTGCTACTACCTCAAA TATATTATCCTACCACCCACGCAACTTACCGCCGCTGCTCTAGTCATTACCTATTGGCCGAGGACGTCAGCAGAG AATGTCAACCCGGGTGTTTGGATTGCCATCTTCATGGTGGCAATCATATTGATCAACTGCTTCGGCGTGAAGATT TTCGGTGAGATGGAGTTTTGGCTCTCATCGTTCAAGGTGATTGTCATCCTGGGAATCATTTTGTGCACTTTCATC TTCGCACTTGGTGGTGGTCCCGACCACGATAGGAGAGGCTTCCGATACTGGAACGAACCCGGTGCCTTCGCTACT AAATATACCGAGGGTTCCCTTGGAAAATTCCTCGCTTTTTGGTCGACACTGGTGCAGGCCACCTTTGCATTCCTC GGTACCGAACTCATTGGTGTAACTGTCGGAGAGGCTCAGAACCCCCGGAAGACCATCCCCAAAGCTATCAAGCTC ACCTTCTGGCGAATTATCGTGTTCTATATTCTCAGCGTGCTCTTCCTCGGTATGCTGGTCCCGTACAACTCTCCA GACCTGGTCTTCGCTACCAAGGCCAAGAGCTCTGCTGCCGCCTCACCTTTCGTGGTGGCGATGAAGCAAGTCGCC GCTCTTCCTCACATCATCAACGGCTGTATCTTAGTGTTTGTGTTTTCTGCCGCCAACTCTGATCTGTACATTGCG ACTCGGACTCTATACGGTCTTGCCCGTGAGAGGAAGGCCCCTCGAATCTTCGCTCGCACTAACCAAGCTGGTGTC CCAGTCTATGCCCTGGGGCTGTCGGCTTCTTTCTGCTTGCTCGCCTTTATGAGTGTTTCCAATGGCTCCAAGGAG GTATTCGGATACTTCACTGACATGGTGTCAATCTTCGGATTGTTGACATGGATCTCCCTCTTGATCACCCACATC TTCTTCATTCGCGCCCGACGTGCACAGGGCGTCGACGAGGCAACACTGGCCTACAAAGCTCCCCTGGGAATCACC GGTTCCTGCATTGCGCTCTTTTTCTCAGTCTTGGTGGCCTTCACTCGCAGCTTCGGTGTGTTTATCCACAACCCG GAAAAATACGGCAATTTCGACTACAAGACCTTTATCACTTCATATATCGGAATCCCCCTCTATGTCATGGCATTT GCTGGGTGGAAGATTTGGAAGAGGACTGAGTTTGTCAAGCCTCATAATGCCGATATCTGGACAGGCAAGGCTGAG ATTGACCGCGAAGAGGCCGAATATGTGGCTATGATGGCCATTGAGAATCAAAACATGCCTAGATGGAAGAAAATT TACACAGCACTGGTTTGA |
| Transcript | >Pro_DTO377G3_2|g1571.t1 ATGGGTCATCCCGATGAGATTAACACTATCGAGGCGCAGCCTGAGTACTTTGACAACTCGGGGGATTTCAAAGAA GGTGAACAGGATGAGCCAGTCAAGCTTCACAGAGAGCTCAAGGCTCGTCACATTTCCATGATTGCCATCGGTGGC GCCATTGGTACTGGATTGGTTGTTGGTACTGGCAGCGCTTTAACCGCCGGACCTGGATCTTTGCTTATTGCATAC TGCTTTATGGGTTTCGTTGTCTGGACCGTCATGTGTGGACTGGGTGAAATGGCTGCTTGGCTACCATTGTCCTCC GGTTTCACTGGTTACGCTGGCCGTTTCTGTGACCCTGCTCTCGGATTCACTCTCGGATGGTGCTACTACCTCAAA TATATTATCCTACCACCCACGCAACTTACCGCCGCTGCTCTAGTCATTACCTATTGGCCGAGGACGTCAGCAGAG AATGTCAACCCGGGTGTTTGGATTGCCATCTTCATGGTGGCAATCATATTGATCAACTGCTTCGGCGTGAAGATT TTCGGTGAGATGGAGTTTTGGCTCTCATCGTTCAAGGTGATTGTCATCCTGGGAATCATTTTGTGCACTTTCATC TTCGCACTTGGTGGTGGTCCCGACCACGATAGGAGAGGCTTCCGATACTGGAACGAACCCGGTGCCTTCGCTACT AAATATACCGAGGGTTCCCTTGGAAAATTCCTCGCTTTTTGGTCGACACTGGTGCAGGCCACCTTTGCATTCCTC GGTACCGAACTCATTGGTGTAACTGTCGGAGAGGCTCAGAACCCCCGGAAGACCATCCCCAAAGCTATCAAGCTC ACCTTCTGGCGAATTATCGTGTTCTATATTCTCAGCGTGCTCTTCCTCGGTATGCTGGTCCCGTACAACTCTCCA GACCTGGTCTTCGCTACCAAGGCCAAGAGCTCTGCTGCCGCCTCACCTTTCGTGGTGGCGATGAAGCAAGTCGCC GCTCTTCCTCACATCATCAACGGCTGTATCTTAGTGTTTGTGTTTTCTGCCGCCAACTCTGATCTGTACATTGCG ACTCGGACTCTATACGGTCTTGCCCGTGAGAGGAAGGCCCCTCGAATCTTCGCTCGCACTAACCAAGCTGGTGTC CCAGTCTATGCCCTGGGGCTGTCGGCTTCTTTCTGCTTGCTCGCCTTTATGAGTGTTTCCAATGGCTCCAAGGAG GTATTCGGATACTTCACTGACATGGTGTCAATCTTCGGATTGTTGACATGGATCTCCCTCTTGATCACCCACATC TTCTTCATTCGCGCCCGACGTGCACAGGGCGTCGACGAGGCAACACTGGCCTACAAAGCTCCCCTGGGAATCACC GGTTCCTGCATTGCGCTCTTTTTCTCAGTCTTGGTGGCCTTCACTCGCAGCTTCGGTGTGTTTATCCACAACCCG GAAAAATACGGCAATTTCGACTACAAGACCTTTATCACTTCATATATCGGAATCCCCCTCTATGTCATGGCATTT GCTGGGTGGAAGATTTGGAAGAGGACTGAGTTTGTCAAGCCTCATAATGCCGATATCTGGACAGGCAAGGCTGAG ATTGACCGCGAAGAGGCCGAATATGTGGCTATGATGGCCATTGAGAATCAAAACATGCCTAGATGGAAGAAAATT TACACAGCACTGGTTTGA |
| Gene | >Pro_DTO377G3_2|g1571.t1 ATGGGTCATCCCGATGAGATTAACACTATCGAGGCGCAGCCTGAGTACTTTGACAACTCGGGGGATTTCAAAGAA GGTGAACAGGATGAGCCAGTCAAGCTTCACAGAGAGCTCAAGGCTCGTCACATTTCCATGATTGCCATCGGTGGC GCCATTGGTACTGGATTGGTTGTTGGTACTGGCAGCGCTTTAACGTGAGTTCTCTTTGGATACAGTTGTTTATGA AACACTACTGACTGAAGCCTATAGCGCCGGAGTATGTTATATTCACTTGCTTCATCTTTTGCCGTTGACTAACCA TTCCTAATCAGCCTGGATCTTTGCTTATTGCATACTGCTTTATGGGTTTCGTTGTCTGGACCGTCATGTGTGGAC TGGGTGAAATGGCTGCTTGGCTACCATTGTCCTCCGGTTTCACTGGTTACGCTGGCCGTTTCTGTGACCCTGCTC TCGGATTCACTCTCGGATGGTGGTGAGTAAAACCCCCAAGCTACATGCTAGTATAAACCGGATGTCTAACCATCT CCTAGCTACTACCTCAAATATATTATCCTACCACCCACGCAACTTACCGCCGCTGCTCTAGTCATTACCTATTGG CCGAGGACGTCAGCAGAGAATGTCAACCCGGGTGTTTGGATTGCCATCTTCATGGTGGCAATCATATTGATCAAC TGCTTCGGCGTGAAGATTTTCGGTGAGATGGAGTTTTGGCTCTCATCGTTCAAGGTGATTGTCATCCTGGGAATC ATTTTGTGCACTTTCATCTTCGCACTTGGTGGTGGTCCCGACCACGATAGGAGAGGCTTCCGATACTGGAACGAA CCCGGTGCCTTCGCTACTAAATATACCGAGGGTTCCCTTGGAAAATTCCTCGCTTTTTGGTCGACACTGGTGCAG GCCACCTTTGCATTCCTCGGTATGGACATTCTGTGATTGAACTTTCCGCCTTTCGCATTCTAATTTTCCTTTTTG TTAGGTACCGAACTCATTGGTGTAACTGTCGGAGAGGCTCAGAACCCCCGGAAGACCATCCCCAAAGCTATCAAG CTCACCTTCTGGCGAATTATCGTGTTCTATATTCTCAGCGTGCTCTTCCTCGGTATGCTGGTCCCGTACAACTCT CCAGACCTGGTCTTCGCTACCAAGGCCAAGAGCTCTGCTGCCGCCTCACCTTTCGTGGTGGCGATGAAGCAAGTC GCCGCTCTTCCTCACATCATCAACGGCTGTATCTTAGTGTTTGTGTTTTCTGCCGCCAACTCTGATCTGTACATT GCGACTCGGACTCTATACGGTCTTGCCCGTGAGAGGAAGGCCCCTCGAATCTTCGCTCGCACTAACCAAGCTGGT GTCCCAGTCTATGCCCTGGGGCTGTCGGCTTCTTTCTGCTTGCTCGCCTTTATGAGTGTTTCCAATGGCTCCAAG GAGGTATTCGGATACTTCACTGACATGGTGTCAATCTTCGGATGTATGTTCCCTCCCAAAATGGCTCGAAGTGTG TCCGGTATTCTGACCTACTCTCACAGTGTTGACATGGATCTCCCTCTTGATCACCCACATCTTCTTCATTCGCGC CCGACGTGCACAGGGCGTCGACGAGGCAACACTGGCCTACAAAGCTCCCCTGGGAATCACCGGTTCCTGCATTGC GCTCTTTTTCTCAGTCTTGGTGGCCTTCACTCGCAGCTTCGGTGTGTTTATCCACAACCCGGAAAAATACGGCAA TTTCGACTACAAGACCTTTATCACTTCATATATCGGAATCCCCCTCTATGTCATGGCATTTGCTGGGTGGAAGAT TTGGAAGAGGACTGAGTTTGTCAAGCCTCATAATGCCGATATCTGGACAGGCAAGGCTGAGATTGACCGCGAAGA GGCCGAATATGTGGCTATGATGGCCATTGAGAATCAAAACATGCCTAGATGGAAGAAAATTTACACAGCACTGGT TTGA |