Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1553.t1
Gene name
Locationscaffold_02:280966..282283
Strand+
Gene length (bp)1317
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08693 SKG6 Transmembrane alpha-helix domain 1.7E-11 192 225

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 199 221 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1553.t1
MATSVSKGAAAVATAIGSTAADTAVQTSAAAETTSETSAAQPTTSSADPTTSAVETTTSSTAAPTTSTEPTTSTT
SSTTSTTSSTSTPEPTTSTPEPTTSTTTSTPDPTTSTTQPVTTSSTSTTSSTSSTTTAPTTSIAPETTTFSSTQG
TTVVIITSTQLAPTADTTSITSSSATDSAALSTSTAAASSGGLSPSGTIAVAVVVPVVSVALIILALLFFWRKRK
ANKAAEEERRKEVEEYGFNPNNPNNDPTLPGMAGTVVPKDNESSGYRGWGTTSAGRKASTNLSSGMGGLAMSEGS
SPGYHHGATPSDGTVQYSDGTRPDSGEIVEPLGVLGAAPVAANNRNNGDIHRGPSNASSAYSAANRSDASEESHM
SAVHPSAGYYGENPYYGDINTHGAYGGDDYQPVIRDVQARRNTRIENPGVYPRQGNAGIAQNF*
Coding >Pro_DTO377G3_2|g1553.t1
ATGGCGACTTCAGTATCCAAGGGCGCTGCCGCTGTCGCTACAGCCATCGGTTCTACCGCCGCGGACACCGCTGTA
CAGACTTCGGCGGCTGCTGAGACAACCAGTGAGACATCTGCCGCTCAACCCACGACCTCTTCAGCCGATCCGACG
ACTTCGGCTGTCGAAACGACAACTTCGTCCACGGCTGCTCCCACCACTTCGACTGAACCCACCACTAGTACTACG
AGCAGTACTACGAGCACGACTAGTAGCACGTCCACGCCGGAGCCGACTACGTCGACTCCCGAGCCTACCACGTCG
ACCACTACGTCGACCCCGGATCCCACCACGTCGACCACCCAGCCTGTGACTACTTCGTCCACTTCGACTACTTCT
TCCACTTCTTCTACCACAACCGCCCCGACCACCTCCATAGCTCCCGAGACGACAACGTTCTCATCCACACAGGGA
ACTACCGTAGTTATTATCACGTCCACTCAATTAGCGCCCACCGCCGATACCACGTCTATCACCTCTTCCAGCGCA
ACCGACTCGGCCGCGCTCTCTACCTCCACCGCAGCAGCTAGCTCCGGTGGTCTTTCTCCCAGCGGCACAATCGCT
GTCGCAGTCGTGGTCCCGGTTGTCTCGGTGGCATTGATCATCCTGGCCCTACTCTTCTTCTGGCGTAAGCGTAAG
GCGAACAAGGCGGCCGAGGAGGAGCGCCGCAAGGAAGTAGAGGAGTACGGATTCAACCCCAACAACCCGAACAAC
GACCCAACCCTTCCCGGTATGGCAGGCACGGTGGTGCCCAAGGACAACGAATCCTCCGGCTACCGCGGCTGGGGA
ACTACTTCTGCCGGGCGCAAGGCGTCCACCAACCTCTCCAGTGGAATGGGTGGCCTGGCCATGTCGGAAGGCAGC
AGCCCGGGCTACCACCACGGCGCAACACCTAGCGATGGCACTGTGCAATATTCCGATGGAACCCGGCCCGACTCT
GGAGAGATCGTCGAACCTCTCGGTGTGCTAGGCGCCGCCCCAGTGGCTGCCAACAACCGGAATAATGGCGATATC
CACCGCGGCCCCTCCAACGCATCTTCCGCGTACTCCGCAGCCAACCGATCCGACGCATCGGAAGAAAGTCACATG
TCCGCTGTCCACCCCTCAGCTGGCTACTACGGTGAGAACCCGTACTACGGCGACATCAACACGCACGGGGCATAC
GGCGGGGACGACTACCAGCCTGTGATCCGTGACGTCCAAGCACGCCGCAATACCCGCATTGAAAACCCGGGCGTC
TATCCACGACAGGGCAATGCCGGTATCGCGCAGAACTTCTGA
Transcript >Pro_DTO377G3_2|g1553.t1
ATGGCGACTTCAGTATCCAAGGGCGCTGCCGCTGTCGCTACAGCCATCGGTTCTACCGCCGCGGACACCGCTGTA
CAGACTTCGGCGGCTGCTGAGACAACCAGTGAGACATCTGCCGCTCAACCCACGACCTCTTCAGCCGATCCGACG
ACTTCGGCTGTCGAAACGACAACTTCGTCCACGGCTGCTCCCACCACTTCGACTGAACCCACCACTAGTACTACG
AGCAGTACTACGAGCACGACTAGTAGCACGTCCACGCCGGAGCCGACTACGTCGACTCCCGAGCCTACCACGTCG
ACCACTACGTCGACCCCGGATCCCACCACGTCGACCACCCAGCCTGTGACTACTTCGTCCACTTCGACTACTTCT
TCCACTTCTTCTACCACAACCGCCCCGACCACCTCCATAGCTCCCGAGACGACAACGTTCTCATCCACACAGGGA
ACTACCGTAGTTATTATCACGTCCACTCAATTAGCGCCCACCGCCGATACCACGTCTATCACCTCTTCCAGCGCA
ACCGACTCGGCCGCGCTCTCTACCTCCACCGCAGCAGCTAGCTCCGGTGGTCTTTCTCCCAGCGGCACAATCGCT
GTCGCAGTCGTGGTCCCGGTTGTCTCGGTGGCATTGATCATCCTGGCCCTACTCTTCTTCTGGCGTAAGCGTAAG
GCGAACAAGGCGGCCGAGGAGGAGCGCCGCAAGGAAGTAGAGGAGTACGGATTCAACCCCAACAACCCGAACAAC
GACCCAACCCTTCCCGGTATGGCAGGCACGGTGGTGCCCAAGGACAACGAATCCTCCGGCTACCGCGGCTGGGGA
ACTACTTCTGCCGGGCGCAAGGCGTCCACCAACCTCTCCAGTGGAATGGGTGGCCTGGCCATGTCGGAAGGCAGC
AGCCCGGGCTACCACCACGGCGCAACACCTAGCGATGGCACTGTGCAATATTCCGATGGAACCCGGCCCGACTCT
GGAGAGATCGTCGAACCTCTCGGTGTGCTAGGCGCCGCCCCAGTGGCTGCCAACAACCGGAATAATGGCGATATC
CACCGCGGCCCCTCCAACGCATCTTCCGCGTACTCCGCAGCCAACCGATCCGACGCATCGGAAGAAAGTCACATG
TCCGCTGTCCACCCCTCAGCTGGCTACTACGGTGAGAACCCGTACTACGGCGACATCAACACGCACGGGGCATAC
GGCGGGGACGACTACCAGCCTGTGATCCGTGACGTCCAAGCACGCCGCAATACCCGCATTGAAAACCCGGGCGTC
TATCCACGACAGGGCAATGCCGGTATCGCGCAGAACTTCTGA
Gene >Pro_DTO377G3_2|g1553.t1
ATGGCGACTTCAGTATCCAAGGGCGCTGCCGCTGTCGCTACAGCCATCGGTTCTACCGCCGCGGACACCGCTGTA
CAGACTTCGGCGGCTGCTGAGACAACCAGTGAGACATCTGCCGCTCAACCCACGACCTCTTCAGCCGATCCGACG
ACTTCGGCTGTCGAAACGACAACTTCGTCCACGGCTGCTCCCACCACTTCGACTGAACCCACCACTAGTACTACG
AGCAGTACTACGAGCACGACTAGTAGCACGTCCACGCCGGAGCCGACTACGTCGACTCCCGAGCCTACCACGTCG
ACCACTACGTCGACCCCGGATCCCACCACGTCGACCACCCAGCCTGTGACTACTTCGTCCACTTCGACTACTTCT
TCCACTTCTTCTACCACAACCGCCCCGACCACCTCCATAGCTCCCGAGACGACAACGTTCTCATCCACACAGGGA
ACTACCGTAGTTATTATCACGTCCACTCAATTAGCGCCCACCGCCGATACCACGTCTATCACCTCTTCCAGCGCA
ACCGACTCGGCCGCGCTCTCTACCTCCACCGCAGCAGCTAGCTCCGGTGGTCTTTCTCCCAGCGGCACAATCGCT
GTCGCAGTCGTGGTCCCGGTTGTCTCGGTGGCATTGATCATCCTGGCCCTACTCTTCTTCTGGCGTAAGCGTAAG
GCGAACAAGGCGGCCGAGGAGGAGCGCCGCAAGGAAGTAGAGGAGTACGGATTCAACCCCAACAACCCGAACAAC
GACCCAACCCTTCCCGGTATGGCAGGCACGGTGGTGCCCAAGGACAACGAATCCTCCGGCTACCGCGGCTGGGGA
ACTACTTCTGCCGGGCGCAAGGCGTCCACCAACCTCTCCAGTGGAATGGGTGGCCTGGCCATGTCGGAAGGCAGC
AGCCCGGGCTACCACCACGGCGCAACACCTAGCGATGGCACTGTGCAATATTCCGATGGAACCCGGCCCGACTCT
GGAGAGATCGTCGAACCTCTCGGTGTGCTAGGCGCCGCCCCAGTGGCTGCCAACAACCGGAATAATGGCGATATC
CACCGCGGCCCCTCCAACGCATCTTCCGCGTACTCCGCAGCCAACCGATCCGACGCATCGGAAGAAAGTCACATG
TCCGCTGTCCACCCCTCAGCTGGCTACTACGGTGAGAACCCGTACTACGGCGACATCAACACGCACGGGGCATAC
GGCGGGGACGACTACCAGCCTGTGATCCGTGACGTCCAAGCACGCCGCAATACCCGCATTGAAAACCCGGGCGTC
TATCCACGACAGGGCAATGCCGGTATCGCGCAGAACTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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