Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1548.t1
Gene name
Locationscaffold_02:260518..261793
Strand+
Gene length (bp)1275
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 2.2E-01 9 40
PF00400 WD40 WD domain, G-beta repeat 3.0E-05 50 86
PF00400 WD40 WD domain, G-beta repeat 2.4E-01 151 199
PF00400 WD40 WD domain, G-beta repeat 8.8E-05 209 248
PF00400 WD40 WD domain, G-beta repeat 2.1E-01 268 294

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1548.t1
MAAPQVISNSGHEEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLVDTLKGHEGAVWCIAWAHPKFGTILA
SSSYDGKVLIWREQPQNATSPSGGSTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFRDNNWTH
QTFHAHGMGVNSISWAPAAFAGSLISSNPGPGQQRRFVTGGSDNLVKIWEYNAESKSYNLTQTLEGHTDWVRDVA
WSPSILSKSYIASAAQDKTVRIWTSDASNPGQWSSQTLEFDTVLWRVSWSLSGNILAVSGGDNKVSLWKENLKGE
WEKVKDIEE*
Coding >Pro_DTO377G3_2|g1548.t1
ATGGCGGCCCCTCAGGTGATCTCGAATTCCGGACACGAAGAGATGATTCACGATGCTGGCTTGGACTATTACGGC
CGCCGGTTGGCCACATGTTCATCCGACAAAACGATAAAGATCTTTGAGATTGAGGGAGAAACACACCGACTAGTC
GATACACTGAAGGGCCACGAGGGTGCTGTGTGGTGTATCGCATGGGCCCACCCCAAATTCGGCACAATTCTAGCC
TCATCTTCCTACGATGGCAAAGTTCTGATCTGGCGGGAACAGCCCCAGAATGCGACCTCGCCCTCCGGTGGTAGC
ACATGGACTAAGGTCTTCGATTTCTCCCTCCACACGGCCTCGGTGAATATGGTTTCCTGGGCTCCCCATGAGAGT
GGATGTCTTCTTGCCTGCGCTTCTTCCGACGGCCATGTCAGCGTGCTCGAGTTCCGTGACAACAACTGGACCCAC
CAAACCTTCCATGCTCACGGAATGGGCGTTAACTCTATCAGCTGGGCCCCCGCGGCCTTTGCTGGTAGCCTTATC
AGCTCTAACCCCGGGCCCGGCCAACAGCGCCGGTTTGTTACCGGTGGCAGCGACAACCTGGTCAAAATCTGGGAG
TATAACGCGGAGTCCAAATCTTACAACCTCACTCAAACCCTCGAGGGACACACTGACTGGGTCCGTGATGTGGCC
TGGTCCCCGAGCATCCTCTCCAAGTCCTACATCGCCTCCGCCGCGCAAGACAAGACCGTTCGCATTTGGACCTCT
GATGCTTCTAACCCGGGCCAGTGGTCCAGCCAAACATTGGAGTTCGACACTGTTCTGTGGCGCGTTAGCTGGAGT
CTCAGCGGTAACATCCTTGCCGTCAGCGGAGGTGATAACAAGGTTAGTTTATGGAAGGAGAACCTCAAGGGGGAG
TGGGAGAAGGTCAAGGATATCGAGGAGTAG
Transcript >Pro_DTO377G3_2|g1548.t1
ATGGCGGCCCCTCAGGTGATCTCGAATTCCGGACACGAAGAGATGATTCACGATGCTGGCTTGGACTATTACGGC
CGCCGGTTGGCCACATGTTCATCCGACAAAACGATAAAGATCTTTGAGATTGAGGGAGAAACACACCGACTAGTC
GATACACTGAAGGGCCACGAGGGTGCTGTGTGGTGTATCGCATGGGCCCACCCCAAATTCGGCACAATTCTAGCC
TCATCTTCCTACGATGGCAAAGTTCTGATCTGGCGGGAACAGCCCCAGAATGCGACCTCGCCCTCCGGTGGTAGC
ACATGGACTAAGGTCTTCGATTTCTCCCTCCACACGGCCTCGGTGAATATGGTTTCCTGGGCTCCCCATGAGAGT
GGATGTCTTCTTGCCTGCGCTTCTTCCGACGGCCATGTCAGCGTGCTCGAGTTCCGTGACAACAACTGGACCCAC
CAAACCTTCCATGCTCACGGAATGGGCGTTAACTCTATCAGCTGGGCCCCCGCGGCCTTTGCTGGTAGCCTTATC
AGCTCTAACCCCGGGCCCGGCCAACAGCGCCGGTTTGTTACCGGTGGCAGCGACAACCTGGTCAAAATCTGGGAG
TATAACGCGGAGTCCAAATCTTACAACCTCACTCAAACCCTCGAGGGACACACTGACTGGGTCCGTGATGTGGCC
TGGTCCCCGAGCATCCTCTCCAAGTCCTACATCGCCTCCGCCGCGCAAGACAAGACCGTTCGCATTTGGACCTCT
GATGCTTCTAACCCGGGCCAGTGGTCCAGCCAAACATTGGAGTTCGACACTGTTCTGTGGCGCGTTAGCTGGAGT
CTCAGCGGTAACATCCTTGCCGTCAGCGGAGGTGATAACAAGGTTAGTTTATGGAAGGAGAACCTCAAGGGGGAG
TGGGAGAAGGTCAAGGATATCGAGGAGTAG
Gene >Pro_DTO377G3_2|g1548.t1
ATGGTAACTAATATTCCGCCACATTGCTTTGAGCTTGTTCCACAATCCCATCGCTAACAGCTTCAAACCTCCAGG
CGGCCCCTCAGGTGATCTCGAATTCCGGACACGAAGAGATGATTGTATGTGCTAAGATAGGAATTGCAACTGGTG
ATCTATGTGGTTACACAATGTACGTGAGCTAACTAAGTATGTTGAATAGCACGATGCTGGCTTGGACTATTACGG
CCGCCGGTTGGCCACATGTTCATCCGACAAAACGATAAAGATCTTTGAGATTGAGGGAGAAACACACCGACTAGT
CGATACACTGAAGGGGTAAGCTAGTCCTATAGATGTGTGCAACTGGGTCTTTTGTCTCTAACATTTGTGGTTGAT
AGCCACGAGGGTGCTGTGTGGTGTATCGCATGGGTGAGTTGACACCAAAACATGAGCAATTATAGTGCGCAATGT
GACTGACCATGCGATTCTCTCGATTTAGGCCCACCCCAAATTCGGCACAATTCTAGCCTCATCTTCCTACGATGG
CAAAGTTCTGATCTGGCGGGAACAGCCCCAGAATGCGACCTCGCCCTCCGGTGGTAGCACATGGACTAAGGTCTT
CGATTTCTCCCTCCACACGGCCTCGGTGAATATGGTTTCCTGGGCTCCCCATGAGAGTGGATGTCTTCTTGCCTG
CGCTTCTTCCGACGGCCATGTCAGCGTGCTCGAGTTCCGTGACAACAACTGGACCCACCAAACCTTCCATGCTCA
CGGAATGGGCGTTAACTCTATCAGCTGGGCCCCCGCGGCCTTTGCTGGTAGCCTTATCAGCTCTAACCCCGGGCC
CGGCCAACAGCGCCGGTTTGTTACCGGTGGCAGCGACAACCTGGTCAAAATCTGGGAGTATAAGTATGTCCATTG
ATAAAACTTTCCAAGCATACAGCTGTGACGTGAACTAACTCGTTCTTTAGCGCGGAGTCCAAATCTTACAACCTC
ACTCAAACCCTCGAGGGACACACTGACTGGGTCCGTGATGTGGCCTGGTCCCCGAGCATCCTCTCCAAGTCCTAC
ATCGCCTCCGCCGCGCAAGACAAGACCGTTCGCATTTGGACCTCTGATGCTTCTAACCCGGGCCAGTGGTCCAGC
CAAACATTGGAGTTCGACACTGTTCTGTGGCGCGTTAGCTGGAGTCTCAGCGGTAACATCCTTGCCGTCAGCGGA
GGTGATAACAAGGTTAGTTTATGGAAGGAGAACCTCAAGGGGGAGTGGGAGAAGGTCAAGGATATCGAGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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