Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1523.t1
Gene name
Locationscaffold_02:194658..196163
Strand-
Gene length (bp)1505
Transcript length (bp)1392
Coding sequence length (bp)1392
Protein length (aa) 464

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00617 RasGEF RasGEF domain 4.3E-57 199 379
PF00618 RasGEF_N RasGEF N-terminal motif 8.3E-24 34 136

GO

GO Term Description Terminal node
GO:0007264 small GTPase mediated signal transduction Yes
GO:0005085 guanyl-nucleotide exchange factor activity Yes
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005515 protein binding No
GO:0005488 binding No
GO:0065007 biological regulation No
GO:0007165 signal transduction No
GO:0051020 GTPase binding No
GO:0098772 molecular function regulator No
GO:0019899 enzyme binding No
GO:0050794 regulation of cellular process No
GO:0050789 regulation of biological process No
GO:0003674 molecular_function No
GO:0035556 intracellular signal transduction No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1523.t1
MDQTETKERRDSGSHDITSPEKLVYQYQGSVEVVRAGTLAALVENLTHHDKLDGAFNRVFLATYKYFTSAAELIE
LLIDRFDCSPPKLDATQTTEWTTQIKPLIRLRVINVLKQWLEHFWSEPKGIDTDQNLRILQSFAKRATDATEASA
VQQLLTVIQRRLAGLECHKRSLSSISNPPKPILPRKLNKLQFLKIDATEIARQLTIMEAHMFGKVQRDELLNKNW
QMKDSSNTPELAPNIRALIRYSNQLSNWVGTLILAESDVKKRTQVIGHLVNVANTCHQLRNYSAVISILAGMESA
PIYRLARTWAMVTERSCNTLRPLQAMTCSAHNYQAYRDTLRVAMAPCVPFLGLFLKDLTFIEDGNPAMTPEGLIN
FQKYTMLASTIHEIQRLKEAPYSLRPVPELQEYLATQLQSAVDLQNMWDKSCQLEARGRDLGNRPRDLYTPTGGM
FASMVVACMVLDD*
Coding >Pro_DTO377G3_2|g1523.t1
ATGGATCAGACAGAGACAAAAGAGCGGAGGGACTCGGGATCTCACGACATCACATCTCCGGAGAAACTCGTCTAC
CAATACCAGGGCAGCGTGGAGGTTGTTAGGGCCGGAACCCTCGCAGCGCTGGTGGAAAATCTGACGCACCACGAC
AAGCTCGACGGTGCCTTCAATCGAGTCTTCCTCGCCACTTATAAGTATTTTACCTCTGCAGCAGAGCTTATTGAG
CTCCTCATCGATCGATTCGACTGCTCGCCTCCCAAATTAGACGCCACCCAGACGACAGAATGGACGACCCAGATA
AAGCCACTGATACGATTGCGCGTGATAAATGTTCTGAAGCAATGGCTTGAACATTTCTGGTCTGAGCCAAAAGGC
ATTGATACAGATCAAAATTTGCGAATACTGCAGTCATTCGCCAAGCGCGCCACGGATGCCACCGAGGCAAGCGCC
GTACAACAACTTCTCACAGTCATTCAGCGCCGACTTGCGGGTCTCGAGTGCCACAAAAGATCGCTATCATCAATA
TCCAACCCACCAAAACCTATTCTACCACGCAAATTAAACAAACTCCAATTCCTCAAAATCGATGCAACGGAAATT
GCGCGGCAGCTGACTATCATGGAAGCACATATGTTCGGCAAAGTACAACGAGATGAATTGCTAAACAAAAACTGG
CAAATGAAGGACAGCTCCAATACGCCCGAGCTAGCTCCAAACATCAGAGCCTTGATTCGGTATTCCAATCAGCTC
TCTAATTGGGTCGGCACCCTAATACTCGCAGAATCGGATGTGAAAAAACGGACCCAAGTGATAGGGCATTTGGTC
AATGTGGCCAATACATGTCACCAACTCCGTAATTACTCCGCGGTAATCTCTATCCTGGCAGGCATGGAAAGCGCA
CCCATCTACCGGCTTGCCCGCACGTGGGCAATGGTTACCGAACGTAGTTGCAATACTCTAAGGCCCCTGCAAGCT
ATGACATGCAGCGCACACAATTACCAGGCCTACCGTGACACGTTACGGGTTGCAATGGCACCGTGCGTGCCTTTC
CTTGGATTGTTCTTGAAAGACTTGACATTTATCGAAGACGGAAACCCAGCCATGACACCGGAAGGGCTCATCAAT
TTCCAAAAATATACTATGCTAGCGTCAACCATCCATGAGATTCAGCGTTTAAAAGAAGCCCCTTACTCGTTACGA
CCCGTGCCTGAGTTGCAGGAATATCTTGCAACTCAGTTGCAATCCGCTGTTGATTTACAAAACATGTGGGACAAA
AGTTGTCAGCTGGAAGCTCGAGGCCGGGATCTTGGAAATAGACCCCGGGATTTATATACCCCCACAGGAGGCATG
TTCGCGTCTATGGTAGTCGCGTGCATGGTCCTGGATGATTGA
Transcript >Pro_DTO377G3_2|g1523.t1
ATGGATCAGACAGAGACAAAAGAGCGGAGGGACTCGGGATCTCACGACATCACATCTCCGGAGAAACTCGTCTAC
CAATACCAGGGCAGCGTGGAGGTTGTTAGGGCCGGAACCCTCGCAGCGCTGGTGGAAAATCTGACGCACCACGAC
AAGCTCGACGGTGCCTTCAATCGAGTCTTCCTCGCCACTTATAAGTATTTTACCTCTGCAGCAGAGCTTATTGAG
CTCCTCATCGATCGATTCGACTGCTCGCCTCCCAAATTAGACGCCACCCAGACGACAGAATGGACGACCCAGATA
AAGCCACTGATACGATTGCGCGTGATAAATGTTCTGAAGCAATGGCTTGAACATTTCTGGTCTGAGCCAAAAGGC
ATTGATACAGATCAAAATTTGCGAATACTGCAGTCATTCGCCAAGCGCGCCACGGATGCCACCGAGGCAAGCGCC
GTACAACAACTTCTCACAGTCATTCAGCGCCGACTTGCGGGTCTCGAGTGCCACAAAAGATCGCTATCATCAATA
TCCAACCCACCAAAACCTATTCTACCACGCAAATTAAACAAACTCCAATTCCTCAAAATCGATGCAACGGAAATT
GCGCGGCAGCTGACTATCATGGAAGCACATATGTTCGGCAAAGTACAACGAGATGAATTGCTAAACAAAAACTGG
CAAATGAAGGACAGCTCCAATACGCCCGAGCTAGCTCCAAACATCAGAGCCTTGATTCGGTATTCCAATCAGCTC
TCTAATTGGGTCGGCACCCTAATACTCGCAGAATCGGATGTGAAAAAACGGACCCAAGTGATAGGGCATTTGGTC
AATGTGGCCAATACATGTCACCAACTCCGTAATTACTCCGCGGTAATCTCTATCCTGGCAGGCATGGAAAGCGCA
CCCATCTACCGGCTTGCCCGCACGTGGGCAATGGTTACCGAACGTAGTTGCAATACTCTAAGGCCCCTGCAAGCT
ATGACATGCAGCGCACACAATTACCAGGCCTACCGTGACACGTTACGGGTTGCAATGGCACCGTGCGTGCCTTTC
CTTGGATTGTTCTTGAAAGACTTGACATTTATCGAAGACGGAAACCCAGCCATGACACCGGAAGGGCTCATCAAT
TTCCAAAAATATACTATGCTAGCGTCAACCATCCATGAGATTCAGCGTTTAAAAGAAGCCCCTTACTCGTTACGA
CCCGTGCCTGAGTTGCAGGAATATCTTGCAACTCAGTTGCAATCCGCTGTTGATTTACAAAACATGTGGGACAAA
AGTTGTCAGCTGGAAGCTCGAGGCCGGGATCTTGGAAATAGACCCCGGGATTTATATACCCCCACAGGAGGCATG
TTCGCGTCTATGGTAGTCGCGTGCATGGTCCTGGATGATTGA
Gene >Pro_DTO377G3_2|g1523.t1
ATGGATCAGACAGAGACAAAAGAGCGGAGGGACTCGGGATCTCACGACATCACATCTCCGGAGAAACTCGTCTAC
CAATACCAGGGCAGCGTGGAGGTTGTTAGGGCCGGAACCCTCGCAGCGCTGGTGGAAAATCTGACGCACCACGAC
AAGCTCGACGGTGCCTTCAATCGAGTCTTCCTCGCCACTTATAAGTATTTTACCTCTGCAGCAGAGCTTATTGAG
CTCCTCATCGATCGATTCGACTGCTCGCCTCCCAAATTAGACGCCACCCAGACGACAGAATGGACGACCCAGATA
AAGCCACTGATACGATTGCGCGTGATAAATGTTCTGAAGCAATGGCTTGAACATTTCTGGTCTGAGCCAAAAGGC
ATTGATACAGATCAAAATTTGCGAATACTGCAGTCATTCGCCAAGCGCGCCACGGATGCCACCGAGGCAAGCGCC
GTACAACAACTTCTCACAGTCATTCAGCGCCGACTTGCGGGTCTCGAGTGCCACAAAAGATCGCTATCATCAATA
TCCAACCCACCAAAACCTATTCTACCACGCAAATTAAACAAACTCCAATTCCTCAAAATCGATGCAACGGAAATT
GCGCGGCAGCTGACTATCATGGAAGCACATATGTTCGGCAAAGTACAACGAGATGAATTGCTAAACAAAAACTGG
CAAATGAAGGACAGCTCCAATACGCCCGAGCTAGCTCCAAACATCAGAGCCTTGATTCGGTATTCCAATCAGCTC
TCTAATTGGGTCGGCACCCTAATACTCGCAGAATCGGATGTGAAAAAACGGACCCAAGTGATAGGGCATTTGGTC
AATGTGGCCAATGTACGTTGTAATCTCTAGCCTGACCCTTGTAATTATTCCAATATGCTAATGTTCTATTCCAGA
CATGTCACCAACTCCGTAATTACTCCGCGGTAATCTCTATCCTGGCAGGCATGGAAAGCGCACCCATCTACCGGC
TTGCCCGCACGTGGGCAATGGTTACCGAACGTAGTTGCAATACTCTAAGGCCCCTGCAAGCTATGACATGCAGCG
CACACAATTACCAGGCCTACCGTGACACGTTACGGGTTGCAATGGCACCGTGCGTGCCTTTCCTTGGTCAGTTCT
CTCGTGAACCGTTGAAATTGCCGATGATTAACCATTCAACAGGATTGTTCTTGAAAGACTTGACATTTATCGAAG
ACGGAAACCCAGCCATGACACCGGAAGGGCTCATCAATTTCCAAAAATATACTATGCTAGCGTCAACCATCCATG
AGATTCAGCGTTTAAAAGAAGCCCCTTACTCGTTACGACCCGTGCCTGAGTTGCAGGAATATCTTGCAACTCAGT
TGCAATCCGCTGTTGATTTACAAAACATGTGGGACAAAAGTTGTCAGCTGGAAGCTCGAGGCCGGGATCTTGGAA
ATAGACCCCGGGATTTATATACCCCCACAGGAGGCATGTTCGCGTCTATGGTAGTCGCGTGCATGGTCCTGGATG
ATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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