Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g152.t1
Gene name
Locationscaffold_01:386347..387064
Strand+
Gene length (bp)717
Transcript length (bp)717
Coding sequence length (bp)717
Protein length (aa) 239

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20493 WD-like_fungi Fungal WD-like 5.8E-08 123 237

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g152.t1
MLSSTIITSLILGLSQLSTGIALPSTPPPTPEPGFIINHVASDYFPNSKGDLSAFDVDVHYVGYSSATEAWLTSL
DPHSATSDEEKARILTEAAYAKKYDENDADMAGDVESLLAHVAGNVTTTTAGIAKRSTFSTSAAHAVLWSACGTV
FSCIAGTTCQFDLQINRAPRSRCEAQGGSNCCVSWSTYNVRAGFFSSTWTACNQEVQAEHKINASCEGFGTSDQG
GDVCLSNRATGCT*
Coding >Pro_DTO377G3_2|g152.t1
ATGCTCTCCAGCACCATCATCACCAGCCTTATCCTGGGTCTTTCCCAGCTAAGCACTGGCATTGCACTGCCCTCA
ACCCCACCCCCAACCCCAGAACCCGGCTTCATCATCAACCACGTAGCCTCCGACTACTTCCCAAACTCGAAGGGC
GACCTGAGCGCCTTCGACGTGGACGTCCACTACGTGGGATATTCCAGCGCGACCGAAGCCTGGCTCACCAGCCTG
GACCCGCACTCAGCCACCAGCGACGAAGAGAAAGCGCGCATCCTGACCGAAGCCGCGTACGCGAAGAAATACGAC
GAGAACGACGCCGACATGGCCGGCGACGTGGAGTCGTTGCTCGCGCACGTTGCCGGGAACGTCACCACTACTACC
GCGGGCATTGCGAAGCGGTCGACCTTCTCGACTAGCGCGGCGCATGCTGTCCTGTGGAGTGCGTGCGGTACGGTG
TTCTCTTGTATTGCTGGTACGACTTGTCAGTTTGATCTGCAGATTAACAGGGCCCCGCGTAGCCGTTGCGAGGCG
CAGGGTGGCTCGAACTGCTGTGTTAGTTGGTCGACTTATAATGTGCGGGCTGGGTTCTTCTCGAGTACTTGGACG
GCTTGCAATCAGGAGGTTCAGGCCGAGCATAAGATTAATGCTTCTTGTGAGGGATTCGGGACTTCGGACCAGGGT
GGTGATGTTTGTCTAAGCAATCGTGCTACTGGATGTACCTAG
Transcript >Pro_DTO377G3_2|g152.t1
ATGCTCTCCAGCACCATCATCACCAGCCTTATCCTGGGTCTTTCCCAGCTAAGCACTGGCATTGCACTGCCCTCA
ACCCCACCCCCAACCCCAGAACCCGGCTTCATCATCAACCACGTAGCCTCCGACTACTTCCCAAACTCGAAGGGC
GACCTGAGCGCCTTCGACGTGGACGTCCACTACGTGGGATATTCCAGCGCGACCGAAGCCTGGCTCACCAGCCTG
GACCCGCACTCAGCCACCAGCGACGAAGAGAAAGCGCGCATCCTGACCGAAGCCGCGTACGCGAAGAAATACGAC
GAGAACGACGCCGACATGGCCGGCGACGTGGAGTCGTTGCTCGCGCACGTTGCCGGGAACGTCACCACTACTACC
GCGGGCATTGCGAAGCGGTCGACCTTCTCGACTAGCGCGGCGCATGCTGTCCTGTGGAGTGCGTGCGGTACGGTG
TTCTCTTGTATTGCTGGTACGACTTGTCAGTTTGATCTGCAGATTAACAGGGCCCCGCGTAGCCGTTGCGAGGCG
CAGGGTGGCTCGAACTGCTGTGTTAGTTGGTCGACTTATAATGTGCGGGCTGGGTTCTTCTCGAGTACTTGGACG
GCTTGCAATCAGGAGGTTCAGGCCGAGCATAAGATTAATGCTTCTTGTGAGGGATTCGGGACTTCGGACCAGGGT
GGTGATGTTTGTCTAAGCAATCGTGCTACTGGATGTACCTAG
Gene >Pro_DTO377G3_2|g152.t1
ATGCTCTCCAGCACCATCATCACCAGCCTTATCCTGGGTCTTTCCCAGCTAAGCACTGGCATTGCACTGCCCTCA
ACCCCACCCCCAACCCCAGAACCCGGCTTCATCATCAACCACGTAGCCTCCGACTACTTCCCAAACTCGAAGGGC
GACCTGAGCGCCTTCGACGTGGACGTCCACTACGTGGGATATTCCAGCGCGACCGAAGCCTGGCTCACCAGCCTG
GACCCGCACTCAGCCACCAGCGACGAAGAGAAAGCGCGCATCCTGACCGAAGCCGCGTACGCGAAGAAATACGAC
GAGAACGACGCCGACATGGCCGGCGACGTGGAGTCGTTGCTCGCGCACGTTGCCGGGAACGTCACCACTACTACC
GCGGGCATTGCGAAGCGGTCGACCTTCTCGACTAGCGCGGCGCATGCTGTCCTGTGGAGTGCGTGCGGTACGGTG
TTCTCTTGTATTGCTGGTACGACTTGTCAGTTTGATCTGCAGATTAACAGGGCCCCGCGTAGCCGTTGCGAGGCG
CAGGGTGGCTCGAACTGCTGTGTTAGTTGGTCGACTTATAATGTGCGGGCTGGGTTCTTCTCGAGTACTTGGACG
GCTTGCAATCAGGAGGTTCAGGCCGAGCATAAGATTAATGCTTCTTGTGAGGGATTCGGGACTTCGGACCAGGGT
GGTGATGTTTGTCTAAGCAATCGTGCTACTGGATGTACCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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