Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1489.t1
Gene name
Locationscaffold_02:120605..121727
Strand+
Gene length (bp)1122
Transcript length (bp)1122
Coding sequence length (bp)1122
Protein length (aa) 374

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04299 FMN_bind_2 Putative FMN-binding domain 5.0E-41 1 213
PF04299 FMN_bind_2 Putative FMN-binding domain 3.7E-05 297 327

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
UAF complex subunit Rrn10

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1489.t1
MHLRPDHAVRDLPTLHAFIEQHPLGVLTTSLPSENHPTLQCSHIPWVLDSEAALEPELPKETTLESELAKEARVP
DGSTSAPPYPSLGVLRGHIARQNPQSKAMVKSALEYSTKTTSIPGAFPITNYAEEPPTSTSYTLPDEVLVVFTSP
VDHYITPNFYTESKPATGRVAPTWNYAAVQVYGRATIYHDAEDEQTELFLRQQLGDLARLGEEGVMGFQDESGFG
SGSGSGPDVKHGGGETETGNGDEEGDPPQDQNQNQNQGQRQNLIPDMQLNQGSKTATGAGGHGDIMPLPRSTSAP
WKIADAPLDYIAALLKNIVGMRIEITRIEGRFKVSQERPLNDRGGVVHGLESMGGRAKDMADFVRRGKVLPGQ*
Coding >Pro_DTO377G3_2|g1489.t1
ATGCATCTGCGTCCTGATCATGCAGTCCGAGACCTCCCAACCCTCCACGCCTTTATCGAACAACACCCACTTGGC
GTCCTCACCACTTCGCTCCCTTCAGAGAATCATCCCACACTCCAATGCAGCCACATCCCCTGGGTGTTGGACAGT
GAAGCAGCCCTCGAACCCGAGTTACCGAAGGAAACAACCCTCGAATCTGAGTTAGCAAAGGAAGCAAGAGTACCC
GATGGCAGCACTTCCGCACCGCCATATCCCTCCCTGGGAGTTCTCCGCGGCCACATCGCGCGCCAAAACCCGCAA
AGCAAAGCGATGGTAAAATCTGCCTTGGAATATAGCACCAAAACAACCAGTATCCCCGGCGCATTTCCTATAACC
AATTATGCAGAAGAACCACCGACATCAACTAGCTACACTCTCCCTGATGAGGTCTTAGTCGTCTTTACCAGCCCA
GTAGACCACTACATCACGCCGAACTTCTACACAGAGTCCAAACCCGCCACGGGCAGGGTCGCTCCGACGTGGAAT
TACGCCGCGGTGCAAGTCTACGGGCGGGCGACTATTTATCACGATGCAGAAGACGAACAAACAGAGCTGTTCCTA
CGACAACAGCTGGGTGATTTAGCCCGGCTTGGAGAGGAAGGGGTAATGGGGTTTCAGGATGAGTCTGGGTTTGGT
TCGGGTTCGGGTTCGGGACCTGATGTCAAACACGGAGGTGGTGAAACCGAAACTGGGAATGGGGATGAGGAGGGG
GACCCACCCCAGGACCAGAACCAAAACCAAAACCAGGGACAGCGCCAAAACCTGATCCCTGATATGCAGCTGAAT
CAGGGGTCGAAGACGGCCACCGGGGCTGGCGGGCATGGCGACATCATGCCATTGCCGAGGTCGACGTCAGCACCT
TGGAAAATCGCCGATGCGCCACTGGACTACATTGCTGCGCTTTTGAAGAATATTGTCGGCATGAGGATTGAAATC
ACCCGGATTGAGGGTCGGTTTAAGGTTAGCCAGGAACGGCCGCTTAATGATCGTGGGGGTGTTGTTCATGGGTTA
GAGAGCATGGGTGGGAGAGCAAAGGATATGGCGGACTTTGTGAGGAGAGGGAAGGTCTTGCCTGGGCAATGA
Transcript >Pro_DTO377G3_2|g1489.t1
ATGCATCTGCGTCCTGATCATGCAGTCCGAGACCTCCCAACCCTCCACGCCTTTATCGAACAACACCCACTTGGC
GTCCTCACCACTTCGCTCCCTTCAGAGAATCATCCCACACTCCAATGCAGCCACATCCCCTGGGTGTTGGACAGT
GAAGCAGCCCTCGAACCCGAGTTACCGAAGGAAACAACCCTCGAATCTGAGTTAGCAAAGGAAGCAAGAGTACCC
GATGGCAGCACTTCCGCACCGCCATATCCCTCCCTGGGAGTTCTCCGCGGCCACATCGCGCGCCAAAACCCGCAA
AGCAAAGCGATGGTAAAATCTGCCTTGGAATATAGCACCAAAACAACCAGTATCCCCGGCGCATTTCCTATAACC
AATTATGCAGAAGAACCACCGACATCAACTAGCTACACTCTCCCTGATGAGGTCTTAGTCGTCTTTACCAGCCCA
GTAGACCACTACATCACGCCGAACTTCTACACAGAGTCCAAACCCGCCACGGGCAGGGTCGCTCCGACGTGGAAT
TACGCCGCGGTGCAAGTCTACGGGCGGGCGACTATTTATCACGATGCAGAAGACGAACAAACAGAGCTGTTCCTA
CGACAACAGCTGGGTGATTTAGCCCGGCTTGGAGAGGAAGGGGTAATGGGGTTTCAGGATGAGTCTGGGTTTGGT
TCGGGTTCGGGTTCGGGACCTGATGTCAAACACGGAGGTGGTGAAACCGAAACTGGGAATGGGGATGAGGAGGGG
GACCCACCCCAGGACCAGAACCAAAACCAAAACCAGGGACAGCGCCAAAACCTGATCCCTGATATGCAGCTGAAT
CAGGGGTCGAAGACGGCCACCGGGGCTGGCGGGCATGGCGACATCATGCCATTGCCGAGGTCGACGTCAGCACCT
TGGAAAATCGCCGATGCGCCACTGGACTACATTGCTGCGCTTTTGAAGAATATTGTCGGCATGAGGATTGAAATC
ACCCGGATTGAGGGTCGGTTTAAGGTTAGCCAGGAACGGCCGCTTAATGATCGTGGGGGTGTTGTTCATGGGTTA
GAGAGCATGGGTGGGAGAGCAAAGGATATGGCGGACTTTGTGAGGAGAGGGAAGGTCTTGCCTGGGCAATGA
Gene >Pro_DTO377G3_2|g1489.t1
ATGCATCTGCGTCCTGATCATGCAGTCCGAGACCTCCCAACCCTCCACGCCTTTATCGAACAACACCCACTTGGC
GTCCTCACCACTTCGCTCCCTTCAGAGAATCATCCCACACTCCAATGCAGCCACATCCCCTGGGTGTTGGACAGT
GAAGCAGCCCTCGAACCCGAGTTACCGAAGGAAACAACCCTCGAATCTGAGTTAGCAAAGGAAGCAAGAGTACCC
GATGGCAGCACTTCCGCACCGCCATATCCCTCCCTGGGAGTTCTCCGCGGCCACATCGCGCGCCAAAACCCGCAA
AGCAAAGCGATGGTAAAATCTGCCTTGGAATATAGCACCAAAACAACCAGTATCCCCGGCGCATTTCCTATAACC
AATTATGCAGAAGAACCACCGACATCAACTAGCTACACTCTCCCTGATGAGGTCTTAGTCGTCTTTACCAGCCCA
GTAGACCACTACATCACGCCGAACTTCTACACAGAGTCCAAACCCGCCACGGGCAGGGTCGCTCCGACGTGGAAT
TACGCCGCGGTGCAAGTCTACGGGCGGGCGACTATTTATCACGATGCAGAAGACGAACAAACAGAGCTGTTCCTA
CGACAACAGCTGGGTGATTTAGCCCGGCTTGGAGAGGAAGGGGTAATGGGGTTTCAGGATGAGTCTGGGTTTGGT
TCGGGTTCGGGTTCGGGACCTGATGTCAAACACGGAGGTGGTGAAACCGAAACTGGGAATGGGGATGAGGAGGGG
GACCCACCCCAGGACCAGAACCAAAACCAAAACCAGGGACAGCGCCAAAACCTGATCCCTGATATGCAGCTGAAT
CAGGGGTCGAAGACGGCCACCGGGGCTGGCGGGCATGGCGACATCATGCCATTGCCGAGGTCGACGTCAGCACCT
TGGAAAATCGCCGATGCGCCACTGGACTACATTGCTGCGCTTTTGAAGAATATTGTCGGCATGAGGATTGAAATC
ACCCGGATTGAGGGTCGGTTTAAGGTTAGCCAGGAACGGCCGCTTAATGATCGTGGGGGTGTTGTTCATGGGTTA
GAGAGCATGGGTGGGAGAGCAAAGGATATGGCGGACTTTGTGAGGAGAGGGAAGGTCTTGCCTGGGCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail