© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1466.t1 |
| Gene name | |
| Location | scaffold_02:21764..23736 |
| Strand | - |
| Gene length (bp) | 1972 |
| Transcript length (bp) | 1851 |
| Coding sequence length (bp) | 1851 |
| Protein length (aa) | 617 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | 2.5E-12 | 148 | 412 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016787 | hydrolase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 1.70 | 0.35 | 3.05 |
| 5d_25C | Five days - 25 degrees Celsius | 0.55 | 0.00 | 1.15 |
| 7d_25C | Seven days - 25 degrees Celsius | 0.94 | 0.02 | 1.86 |
| 10d_25C | Ten days - 25 degrees Celsius | 0.55 | 0.00 | 1.16 |
| 7d_15C | Seven days - 15 degrees Celsius | 1.82 | 0.00 | 3.69 |
| 7d_30C | Seven days - 30 degrees Celsius | 11.19 | 4.93 | 17.46 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.054411 | no |
| 3d_25C | 7d_25C | 0.249498 | no |
| 3d_25C | 7d_15C | 0.930269 | no |
| 3d_25C | 7d_30C | 0.000700 | yes |
| 3d_25C | 10d_25C | 0.048822 | yes |
| 5d_25C | 7d_25C | 0.415481 | no |
| 5d_25C | 7d_15C | 0.051079 | no |
| 5d_25C | 7d_30C | 0.000700 | yes |
| 5d_25C | 10d_25C | 1.000000 | no |
| 7d_25C | 7d_15C | 0.273134 | no |
| 7d_25C | 7d_30C | 0.000700 | yes |
| 7d_25C | 10d_25C | 0.414562 | no |
| 7d_15C | 7d_30C | 0.000700 | yes |
| 7d_15C | 10d_25C | 0.049575 | yes |
| 7d_30C | 10d_25C | 0.000700 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1466.t1 MRLNFLLLAFGLSASLRGVQAETQVDQSVASIWDDFKNTVDCGACQILLGSIKVAAGLGENFMIDVFTGLCKISR VEDPDVCAGIIKKEGPALHDVFKHLQLNSDASKTLCANLVGLCKQPDVHSYNLTFPSPKPKTVRPPPSGKTPLKV VHFSDTHVDLLYEPESSYKCSKPICCRSWSDEYSPENTAYPCGPFGNTKCDAPQILQESLHAAIADINPEFSIYT GDVVAHDIWLVDEAEALKALNATYSAMEKDIGTVYAAIGNHDTAPLNLFPTDASNKADPKWAYSALAEDWYGLTG VSSVKSADQFASYSAVHPNSNLRIISYNSIFYYVFNFYMYQEPMEKDPRGQFEWLIKELQAAEDAGQRAWLISHI PSGIPDHFRDHSDYFDQIVQRYEATIAGLFYGHTHRDGFQIAYSDYNDRDWNTATAMGYIIPAVTPTEGSPSFRV YEIDPVTFGVLDYTQYIANISDPSFQTKPEWLPYYSAKADYGSKISPPLTDPQAEISPAFWHNVTVAMERDPTVF QDYWARRVRGFEVESCNGDCMKNEICLLRAANAQYNCDKPKSLDFSKLDGQEGEILPEKEPRTSCHHAGMATLIS KMAHQARLEGRKEPEG* |
| Coding | >Pro_DTO377G3_2|g1466.t1 ATGAGACTCAACTTCTTGCTGCTGGCGTTCGGCCTTTCGGCGTCTCTCCGGGGCGTACAAGCCGAGACTCAAGTC GACCAGTCCGTCGCTTCTATCTGGGACGACTTCAAGAATACAGTTGACTGCGGTGCTTGCCAAATTCTCCTCGGC AGCATCAAAGTTGCCGCAGGGCTTGGTGAGAATTTCATGATCGACGTATTCACAGGGTTGTGCAAAATCAGCAGG GTCGAGGACCCAGATGTCTGCGCCGGGATCATCAAGAAAGAAGGCCCTGCGCTGCATGATGTTTTCAAACATTTA CAACTGAACTCTGACGCCTCAAAGACACTATGCGCTAATCTGGTCGGGCTCTGCAAGCAACCCGATGTTCATTCC TATAATTTGACGTTCCCTTCACCCAAGCCAAAGACTGTGAGGCCACCACCTAGCGGCAAGACACCGCTCAAGGTC GTCCATTTCAGCGATACACACGTGGACCTCCTCTACGAGCCTGAATCTAGCTACAAGTGTTCCAAGCCTATCTGT TGCAGATCTTGGTCGGATGAATATTCACCAGAGAATACAGCCTACCCATGTGGACCATTTGGAAATACGAAGTGT GACGCACCACAAATACTTCAGGAGAGCTTGCATGCTGCTATCGCAGACATCAATCCGGAGTTCTCCATTTACACC GGTGATGTGGTGGCCCACGATATCTGGTTGGTTGACGAGGCCGAAGCTCTGAAAGCGCTCAATGCTACGTACAGT GCAATGGAAAAGGACATTGGCACTGTGTATGCTGCAATAGGGAATCATGACACTGCACCACTCAACCTCTTTCCC ACGGATGCTTCGAATAAAGCTGATCCCAAATGGGCGTACTCGGCTCTTGCAGAAGATTGGTATGGCCTCACAGGT GTTTCTTCTGTCAAATCTGCGGATCAATTCGCGTCGTACTCAGCCGTCCATCCCAACAGCAATCTGCGCATCATT TCTTATAACAGCATCTTCTACTACGTATTCAACTTCTATATGTACCAGGAACCAATGGAGAAAGACCCACGAGGA CAATTTGAATGGCTCATCAAGGAACTGCAGGCTGCCGAGGACGCGGGCCAACGTGCATGGCTAATCTCTCATATA CCATCCGGTATACCAGATCACTTCCGCGACCATTCGGATTACTTCGACCAAATTGTGCAGCGTTACGAAGCCACC ATCGCGGGATTATTCTATGGTCATACACACCGGGATGGGTTCCAGATCGCATACTCCGACTACAACGACCGAGAC TGGAACACAGCTACTGCAATGGGTTATATCATTCCAGCCGTAACGCCAACGGAAGGCTCGCCCTCTTTCCGCGTC TACGAAATTGATCCAGTCACTTTCGGCGTCTTGGATTACACTCAATACATCGCCAACATCAGCGACCCGTCCTTT CAGACAAAGCCAGAATGGCTGCCCTATTACTCCGCGAAGGCAGACTATGGATCCAAGATCTCTCCTCCGCTTACG GATCCACAAGCCGAGATCAGTCCAGCTTTCTGGCACAATGTCACCGTCGCGATGGAACGCGATCCCACGGTTTTC CAAGATTATTGGGCGAGACGTGTTCGCGGATTCGAAGTTGAGAGCTGCAATGGTGACTGCATGAAAAATGAGATC TGCCTTCTTCGTGCCGCCAATGCACAGTATAACTGTGATAAACCAAAGTCTTTGGACTTCTCTAAGCTTGATGGG CAGGAGGGTGAGATCTTGCCGGAAAAGGAGCCTCGCACCAGCTGCCATCATGCTGGAATGGCGACTCTGATCTCA AAAATGGCGCATCAGGCTAGACTTGAGGGGAGAAAGGAGCCTGAGGGTTGA |
| Transcript | >Pro_DTO377G3_2|g1466.t1 ATGAGACTCAACTTCTTGCTGCTGGCGTTCGGCCTTTCGGCGTCTCTCCGGGGCGTACAAGCCGAGACTCAAGTC GACCAGTCCGTCGCTTCTATCTGGGACGACTTCAAGAATACAGTTGACTGCGGTGCTTGCCAAATTCTCCTCGGC AGCATCAAAGTTGCCGCAGGGCTTGGTGAGAATTTCATGATCGACGTATTCACAGGGTTGTGCAAAATCAGCAGG GTCGAGGACCCAGATGTCTGCGCCGGGATCATCAAGAAAGAAGGCCCTGCGCTGCATGATGTTTTCAAACATTTA CAACTGAACTCTGACGCCTCAAAGACACTATGCGCTAATCTGGTCGGGCTCTGCAAGCAACCCGATGTTCATTCC TATAATTTGACGTTCCCTTCACCCAAGCCAAAGACTGTGAGGCCACCACCTAGCGGCAAGACACCGCTCAAGGTC GTCCATTTCAGCGATACACACGTGGACCTCCTCTACGAGCCTGAATCTAGCTACAAGTGTTCCAAGCCTATCTGT TGCAGATCTTGGTCGGATGAATATTCACCAGAGAATACAGCCTACCCATGTGGACCATTTGGAAATACGAAGTGT GACGCACCACAAATACTTCAGGAGAGCTTGCATGCTGCTATCGCAGACATCAATCCGGAGTTCTCCATTTACACC GGTGATGTGGTGGCCCACGATATCTGGTTGGTTGACGAGGCCGAAGCTCTGAAAGCGCTCAATGCTACGTACAGT GCAATGGAAAAGGACATTGGCACTGTGTATGCTGCAATAGGGAATCATGACACTGCACCACTCAACCTCTTTCCC ACGGATGCTTCGAATAAAGCTGATCCCAAATGGGCGTACTCGGCTCTTGCAGAAGATTGGTATGGCCTCACAGGT GTTTCTTCTGTCAAATCTGCGGATCAATTCGCGTCGTACTCAGCCGTCCATCCCAACAGCAATCTGCGCATCATT TCTTATAACAGCATCTTCTACTACGTATTCAACTTCTATATGTACCAGGAACCAATGGAGAAAGACCCACGAGGA CAATTTGAATGGCTCATCAAGGAACTGCAGGCTGCCGAGGACGCGGGCCAACGTGCATGGCTAATCTCTCATATA CCATCCGGTATACCAGATCACTTCCGCGACCATTCGGATTACTTCGACCAAATTGTGCAGCGTTACGAAGCCACC ATCGCGGGATTATTCTATGGTCATACACACCGGGATGGGTTCCAGATCGCATACTCCGACTACAACGACCGAGAC TGGAACACAGCTACTGCAATGGGTTATATCATTCCAGCCGTAACGCCAACGGAAGGCTCGCCCTCTTTCCGCGTC TACGAAATTGATCCAGTCACTTTCGGCGTCTTGGATTACACTCAATACATCGCCAACATCAGCGACCCGTCCTTT CAGACAAAGCCAGAATGGCTGCCCTATTACTCCGCGAAGGCAGACTATGGATCCAAGATCTCTCCTCCGCTTACG GATCCACAAGCCGAGATCAGTCCAGCTTTCTGGCACAATGTCACCGTCGCGATGGAACGCGATCCCACGGTTTTC CAAGATTATTGGGCGAGACGTGTTCGCGGATTCGAAGTTGAGAGCTGCAATGGTGACTGCATGAAAAATGAGATC TGCCTTCTTCGTGCCGCCAATGCACAGTATAACTGTGATAAACCAAAGTCTTTGGACTTCTCTAAGCTTGATGGG CAGGAGGGTGAGATCTTGCCGGAAAAGGAGCCTCGCACCAGCTGCCATCATGCTGGAATGGCGACTCTGATCTCA AAAATGGCGCATCAGGCTAGACTTGAGGGGAGAAAGGAGCCTGAGGGTTGA |
| Gene | >Pro_DTO377G3_2|g1466.t1 ATGAGACTCAACTTCTTGCTGCTGGCGTTCGGCCTTTCGGCGTCTCTCCGGGGCGTACAAGCCGAGACTCAAGTC GACCAGTCCGTCGCTTCTATCTGGGACGACTTCAAGAATACAGTTGACTGCGGTGCTTGCCAAGTATGCTTATGT TTAGCACTTCCATTCTATTGACTCCTTTGCTGACTCTATGCAATTATACAGATTCTCCTCGGCAGCATCAAAGTT GCCGCAGGGCTTGGTGAGAATTTCATGATCGACGTATTCACAGGGTTGTGCAAAATCAGCAGGGTATGTTGGCCA TGCTCGTGAGCTTACTGACTCAATCCCATTAATCGCAAGTGCACAGGTCGAGGACCCAGATGTCTGCGCCGGGAT CATCAAGAAAGAAGGCCCTGCGCTGCATGATGTTTTCAAACATTTACAACTGAACTCTGACGCCTCAAAGACACT ATGCGCTAATCTGGTCGGGCTCTGCAAGCAACCCGATGTTCATTCCTATAATTTGACGTTCCCTTCACCCAAGCC AAAGACTGTGAGGCCACCACCTAGCGGCAAGACACCGCTCAAGGTCGTCCATTTCAGCGATACACACGTGGACCT CCTCTACGAGCCTGAATCTAGCTACAAGTGTTCCAAGCCTATCTGTTGCAGATCTTGGTCGGATGAATATTCACC AGAGAATACAGCCTACCCATGTGGACCATTTGGAAATACGAAGTGTGACGCACCACAAATACTTCAGGAGAGCTT GCATGCTGCTATCGCAGACATCAATCCGGAGTTCTCCATTTACACCGGTGATGTGGTGGCCCACGATATCTGGTT GGTTGACGAGGCCGAAGCTCTGAAAGCGCTCAATGCTACGTACAGTGCAATGGAAAAGGACATTGGCACTGTGTA TGCTGCAATAGGGAATCATGACACTGCACCACTCAACCTCTTTCCCACGGATGCTTCGAATAAAGCTGATCCCAA ATGGGCGTACTCGGCTCTTGCAGAAGATTGGTATGGCCTCACAGGTGTTTCTTCTGTCAAATCTGCGGATCAATT CGCGTCGTACTCAGCCGTCCATCCCAACAGCAATCTGCGCATCATTTCTTATAACAGCATCTTCTACTACGTATT CAACTTCTATATGTACCAGGAACCAATGGAGAAAGACCCACGAGGACAATTTGAATGGCTCATCAAGGAACTGCA GGCTGCCGAGGACGCGGGCCAACGTGCATGGCTAATCTCTCATATACCATCCGGTATACCAGATCACTTCCGCGA CCATTCGGATTACTTCGACCAAATTGTGCAGCGTTACGAAGCCACCATCGCGGGATTATTCTATGGTCATACACA CCGGGATGGGTTCCAGATCGCATACTCCGACTACAACGACCGAGACTGGAACACAGCTACTGCAATGGGTTATAT CATTCCAGCCGTAACGCCAACGGAAGGCTCGCCCTCTTTCCGCGTCTACGAAATTGATCCAGTCACTTTCGGCGT CTTGGATTACACTCAATACATCGCCAACATCAGCGACCCGTCCTTTCAGACAAAGCCAGAATGGCTGCCCTATTA CTCCGCGAAGGCAGACTATGGATCCAAGATCTCTCCTCCGCTTACGGATCCACAAGCCGAGATCAGTCCAGCTTT CTGGCACAATGTCACCGTCGCGATGGAACGCGATCCCACGGTTTTCCAAGATTATTGGGCGAGACGTGTTCGCGG ATTCGAAGTTGAGAGCTGCAATGGTGACTGCATGAAAAATGAGATCTGCCTTCTTCGTGCCGCCAATGCACAGTA TAACTGTGATAAACCAAAGTCTTTGGACTTCTCTAAGCTTGATGGGCAGGAGGGTGAGATCTTGCCGGAAAAGGA GCCTCGCACCAGCTGCCATCATGCTGGAATGGCGACTCTGATCTCAAAAATGGCGCATCAGGCTAGACTTGAGGG GAGAAAGGAGCCTGAGGGTTGA |