Protein ID | Pro_DTO377G3_2|g1456.t1 |
Gene name | |
Location | scaffold_01:3837259..3839881 |
Strand | - |
Gene length (bp) | 2622 |
Transcript length (bp) | 2622 |
Coding sequence length (bp) | 2622 |
Protein length (aa) | 874 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 3.4E-14 | 619 | 709 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 6.9E-10 | 662 | 742 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 3.1E-09 | 708 | 775 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.8E-14 | 716 | 808 |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.8E-10 | 810 | 866 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 8.8E-06 | 554 | 603 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.6E-06 | 648 | 698 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.3E-08 | 714 | 764 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 7.7E-05 | 755 | 797 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 6.0E-08 | 779 | 830 |
PF00023 | Ank | Ankyrin repeat | 1.3E-03 | 744 | 776 |
PF13857 | Ank_5 | Ankyrin repeats (many copies) | 6.0E-07 | 735 | 783 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1456.t1 MSLSLADTEATLRAVDKATNELGFCRNRVWAIAKSLLGGPGEFPKLLPSLENSPHETKKEDHQLCTFDFCEQSRV NFTLVTQRHEPPCDGSRCPLENFPSETLEAAVRKEQQITAWYLWETGTLQHNERYMAVSHVWSDGTGTGSQARGD VNSCLLELFQEFALEFNCEGLWWDTICIPTKKELREKALKRMHLNYKAAAVTLVHDCFLREREWRDADLACFYIV MSPWFSRGWTALELKMSQTVQIIFKGPEGPITKDLDRDILQAKSNDCPTTKHELAKDILKRFRREEVDGLDDLLA ILSSRHTSWPRDMAIISGLIVGIELPENYPQQKIYQEILQKLGKISHAHLFHNSATMTNGYNWCPTNIYDLPVTL SADVLQIEENGNLFGDWNIISLDFLKDESVVLGHAHPLIEGKVRLAQKEKDKHILLIEPDPTLSETRISRGLLVK PSFRRDKIHFDCYCDYVGPVYFHPPLIRSNIPNFDPNDLFKIHVGKDETTHDGSHQSTERSQNAQSMIEDMKNGL LNPQYRKRESDLKTLDLTAWDQLKLSEELIKAAGEGDYNNTKALLEKIRDPNQSDKSGWSALHHAVWYGQTKVAK LLVKRLNPQQQTASGEEPLHLAADRGNEELMRILLARSTPNLNREDGLNALHLAAMNNVTGIVDELLQKWDINAT GVKKQTALHMASFRGHEDVVHVLTKQNAKHDLKDCDQETALSLAVFNGHVNTVRLLKAAKADLDVRDNDGWTLLH RAVNRGHIPAIETLAKLGANLEAQDNDGWTPLQWAAIKGYITAIETLAKLGANLEAQDNNGRTPLQCVASNGHIP AIETLAKLGANLEAQDNSGRTPLQWAVSNGHVTAVKILCDLKARSQQV* |
Coding | >Pro_DTO377G3_2|g1456.t1 ATGTCCTTGTCATTAGCCGATACAGAGGCCACCTTACGAGCAGTCGACAAAGCCACGAACGAATTGGGCTTTTGT CGCAACCGCGTCTGGGCGATAGCCAAGAGCCTACTGGGAGGTCCTGGAGAATTCCCGAAATTACTCCCTTCGCTG GAAAATTCACCCCACGAGACAAAAAAGGAAGACCATCAGCTGTGTACTTTCGATTTTTGCGAGCAATCCCGAGTC AATTTCACTCTGGTGACACAGCGCCACGAACCGCCTTGTGATGGAAGCCGCTGTCCTCTTGAAAATTTCCCTTCA GAAACCCTGGAAGCAGCTGTCCGCAAGGAGCAACAAATCACAGCGTGGTATTTATGGGAAACGGGAACTCTTCAA CACAACGAGCGGTATATGGCAGTATCCCATGTATGGTCGGACGGTACCGGCACCGGAAGCCAAGCCCGCGGCGAT GTGAACAGCTGCTTGCTGGAGTTGTTTCAAGAATTTGCTCTCGAATTCAACTGTGAGGGTCTCTGGTGGGATACT ATCTGCATTCCAACAAAGAAAGAGCTTCGCGAAAAAGCTTTAAAGCGCATGCACCTAAACTACAAGGCCGCGGCG GTCACACTGGTCCACGATTGTTTCCTTAGAGAGCGCGAATGGCGTGATGCAGACTTAGCATGCTTTTATATCGTT ATGTCTCCTTGGTTCAGCCGAGGCTGGACGGCATTGGAGTTGAAAATGTCCCAGACTGTTCAAATCATTTTCAAA GGTCCCGAGGGCCCGATCACGAAGGACCTAGACAGAGACATATTACAAGCAAAGAGCAATGATTGCCCTACCACC AAGCATGAACTTGCGAAAGACATACTCAAAAGATTTCGGAGGGAAGAAGTTGACGGATTGGATGATCTTCTAGCA ATTCTCAGTTCACGCCACACATCTTGGCCAAGAGACATGGCGATCATTTCAGGACTCATTGTTGGAATCGAATTG CCAGAAAACTACCCCCAACAGAAGATTTATCAAGAGATTCTGCAGAAGCTTGGCAAAATATCACATGCGCATCTG TTCCACAATTCAGCAACTATGACGAATGGATACAACTGGTGCCCTACAAACATCTATGATCTACCTGTTACACTT TCAGCCGATGTCCTCCAGATTGAAGAGAATGGGAATTTGTTCGGAGATTGGAATATCATTTCTCTTGATTTTCTC AAAGACGAAAGCGTTGTCTTAGGTCATGCCCATCCACTCATAGAAGGAAAGGTTCGCCTCGCCCAAAAAGAGAAA GACAAGCATATCCTACTCATTGAGCCTGATCCCACTCTTAGTGAGACTAGAATAAGCAGAGGCCTTCTGGTCAAG CCTTCGTTTAGGCGCGATAAGATTCATTTCGATTGTTATTGTGATTATGTCGGCCCGGTTTATTTCCATCCGCCA TTAATCAGGTCAAATATCCCAAATTTTGACCCGAATGATCTATTCAAGATTCACGTTGGAAAAGATGAGACGACG CACGATGGCAGCCATCAAAGCACCGAAAGGAGCCAAAATGCTCAGAGCATGATCGAGGATATGAAAAATGGTTTA CTCAATCCGCAATACAGGAAACGGGAAAGTGATTTGAAAACACTTGACCTTACCGCATGGGACCAATTGAAATTA TCAGAAGAGTTGATAAAGGCCGCCGGTGAAGGTGATTACAACAACACAAAAGCTCTCCTGGAGAAGATACGGGAT CCGAACCAAAGTGATAAATCAGGGTGGTCTGCATTACATCATGCCGTTTGGTATGGCCAAACAAAGGTAGCCAAG CTGCTTGTCAAAAGGTTGAATCCTCAACAGCAGACTGCCAGTGGCGAAGAACCACTTCACCTCGCGGCAGACCGT GGCAATGAAGAACTGATGAGGATACTGCTGGCACGCTCTACTCCTAACTTGAATCGAGAAGATGGATTGAATGCT CTACATCTGGCAGCGATGAATAATGTGACTGGAATCGTGGATGAACTCTTACAAAAGTGGGATATCAACGCAACT GGTGTTAAGAAGCAGACTGCATTACATATGGCATCGTTTCGGGGCCATGAAGATGTAGTACATGTCCTGACCAAG CAAAATGCCAAACACGATCTCAAAGACTGCGACCAGGAAACCGCTTTGTCACTAGCAGTTTTCAACGGCCACGTA AATACCGTGCGGTTACTCAAAGCGGCAAAAGCTGATCTTGATGTCCGAGATAATGATGGCTGGACTCTGCTTCAT CGAGCAGTGAACAGAGGTCATATTCCCGCTATCGAGACACTCGCCAAACTAGGAGCGAATCTCGAAGCCCAAGAT AATGATGGCTGGACTCCGCTTCAATGGGCGGCGATCAAAGGTTATATTACCGCTATCGAGACACTCGCCAAACTA GGAGCGAATCTCGAAGCCCAAGATAATAATGGCCGGACTCCGCTTCAATGCGTAGCAAGCAACGGTCATATTCCC GCTATCGAGACACTCGCCAAACTAGGAGCGAATCTCGAAGCCCAAGATAATAGTGGCCGGACTCCGCTTCAATGG GCAGTGAGCAACGGTCATGTCACCGCTGTCAAGATACTCTGTGACCTCAAAGCTAGGTCTCAACAAGTATAG |
Transcript | >Pro_DTO377G3_2|g1456.t1 ATGTCCTTGTCATTAGCCGATACAGAGGCCACCTTACGAGCAGTCGACAAAGCCACGAACGAATTGGGCTTTTGT CGCAACCGCGTCTGGGCGATAGCCAAGAGCCTACTGGGAGGTCCTGGAGAATTCCCGAAATTACTCCCTTCGCTG GAAAATTCACCCCACGAGACAAAAAAGGAAGACCATCAGCTGTGTACTTTCGATTTTTGCGAGCAATCCCGAGTC AATTTCACTCTGGTGACACAGCGCCACGAACCGCCTTGTGATGGAAGCCGCTGTCCTCTTGAAAATTTCCCTTCA GAAACCCTGGAAGCAGCTGTCCGCAAGGAGCAACAAATCACAGCGTGGTATTTATGGGAAACGGGAACTCTTCAA CACAACGAGCGGTATATGGCAGTATCCCATGTATGGTCGGACGGTACCGGCACCGGAAGCCAAGCCCGCGGCGAT GTGAACAGCTGCTTGCTGGAGTTGTTTCAAGAATTTGCTCTCGAATTCAACTGTGAGGGTCTCTGGTGGGATACT ATCTGCATTCCAACAAAGAAAGAGCTTCGCGAAAAAGCTTTAAAGCGCATGCACCTAAACTACAAGGCCGCGGCG GTCACACTGGTCCACGATTGTTTCCTTAGAGAGCGCGAATGGCGTGATGCAGACTTAGCATGCTTTTATATCGTT ATGTCTCCTTGGTTCAGCCGAGGCTGGACGGCATTGGAGTTGAAAATGTCCCAGACTGTTCAAATCATTTTCAAA GGTCCCGAGGGCCCGATCACGAAGGACCTAGACAGAGACATATTACAAGCAAAGAGCAATGATTGCCCTACCACC AAGCATGAACTTGCGAAAGACATACTCAAAAGATTTCGGAGGGAAGAAGTTGACGGATTGGATGATCTTCTAGCA ATTCTCAGTTCACGCCACACATCTTGGCCAAGAGACATGGCGATCATTTCAGGACTCATTGTTGGAATCGAATTG CCAGAAAACTACCCCCAACAGAAGATTTATCAAGAGATTCTGCAGAAGCTTGGCAAAATATCACATGCGCATCTG TTCCACAATTCAGCAACTATGACGAATGGATACAACTGGTGCCCTACAAACATCTATGATCTACCTGTTACACTT TCAGCCGATGTCCTCCAGATTGAAGAGAATGGGAATTTGTTCGGAGATTGGAATATCATTTCTCTTGATTTTCTC AAAGACGAAAGCGTTGTCTTAGGTCATGCCCATCCACTCATAGAAGGAAAGGTTCGCCTCGCCCAAAAAGAGAAA GACAAGCATATCCTACTCATTGAGCCTGATCCCACTCTTAGTGAGACTAGAATAAGCAGAGGCCTTCTGGTCAAG CCTTCGTTTAGGCGCGATAAGATTCATTTCGATTGTTATTGTGATTATGTCGGCCCGGTTTATTTCCATCCGCCA TTAATCAGGTCAAATATCCCAAATTTTGACCCGAATGATCTATTCAAGATTCACGTTGGAAAAGATGAGACGACG CACGATGGCAGCCATCAAAGCACCGAAAGGAGCCAAAATGCTCAGAGCATGATCGAGGATATGAAAAATGGTTTA CTCAATCCGCAATACAGGAAACGGGAAAGTGATTTGAAAACACTTGACCTTACCGCATGGGACCAATTGAAATTA TCAGAAGAGTTGATAAAGGCCGCCGGTGAAGGTGATTACAACAACACAAAAGCTCTCCTGGAGAAGATACGGGAT CCGAACCAAAGTGATAAATCAGGGTGGTCTGCATTACATCATGCCGTTTGGTATGGCCAAACAAAGGTAGCCAAG CTGCTTGTCAAAAGGTTGAATCCTCAACAGCAGACTGCCAGTGGCGAAGAACCACTTCACCTCGCGGCAGACCGT GGCAATGAAGAACTGATGAGGATACTGCTGGCACGCTCTACTCCTAACTTGAATCGAGAAGATGGATTGAATGCT CTACATCTGGCAGCGATGAATAATGTGACTGGAATCGTGGATGAACTCTTACAAAAGTGGGATATCAACGCAACT GGTGTTAAGAAGCAGACTGCATTACATATGGCATCGTTTCGGGGCCATGAAGATGTAGTACATGTCCTGACCAAG CAAAATGCCAAACACGATCTCAAAGACTGCGACCAGGAAACCGCTTTGTCACTAGCAGTTTTCAACGGCCACGTA AATACCGTGCGGTTACTCAAAGCGGCAAAAGCTGATCTTGATGTCCGAGATAATGATGGCTGGACTCTGCTTCAT CGAGCAGTGAACAGAGGTCATATTCCCGCTATCGAGACACTCGCCAAACTAGGAGCGAATCTCGAAGCCCAAGAT AATGATGGCTGGACTCCGCTTCAATGGGCGGCGATCAAAGGTTATATTACCGCTATCGAGACACTCGCCAAACTA GGAGCGAATCTCGAAGCCCAAGATAATAATGGCCGGACTCCGCTTCAATGCGTAGCAAGCAACGGTCATATTCCC GCTATCGAGACACTCGCCAAACTAGGAGCGAATCTCGAAGCCCAAGATAATAGTGGCCGGACTCCGCTTCAATGG GCAGTGAGCAACGGTCATGTCACCGCTGTCAAGATACTCTGTGACCTCAAAGCTAGGTCTCAACAAGTATAG |
Gene | >Pro_DTO377G3_2|g1456.t1 ATGTCCTTGTCATTAGCCGATACAGAGGCCACCTTACGAGCAGTCGACAAAGCCACGAACGAATTGGGCTTTTGT CGCAACCGCGTCTGGGCGATAGCCAAGAGCCTACTGGGAGGTCCTGGAGAATTCCCGAAATTACTCCCTTCGCTG GAAAATTCACCCCACGAGACAAAAAAGGAAGACCATCAGCTGTGTACTTTCGATTTTTGCGAGCAATCCCGAGTC AATTTCACTCTGGTGACACAGCGCCACGAACCGCCTTGTGATGGAAGCCGCTGTCCTCTTGAAAATTTCCCTTCA GAAACCCTGGAAGCAGCTGTCCGCAAGGAGCAACAAATCACAGCGTGGTATTTATGGGAAACGGGAACTCTTCAA CACAACGAGCGGTATATGGCAGTATCCCATGTATGGTCGGACGGTACCGGCACCGGAAGCCAAGCCCGCGGCGAT GTGAACAGCTGCTTGCTGGAGTTGTTTCAAGAATTTGCTCTCGAATTCAACTGTGAGGGTCTCTGGTGGGATACT ATCTGCATTCCAACAAAGAAAGAGCTTCGCGAAAAAGCTTTAAAGCGCATGCACCTAAACTACAAGGCCGCGGCG GTCACACTGGTCCACGATTGTTTCCTTAGAGAGCGCGAATGGCGTGATGCAGACTTAGCATGCTTTTATATCGTT ATGTCTCCTTGGTTCAGCCGAGGCTGGACGGCATTGGAGTTGAAAATGTCCCAGACTGTTCAAATCATTTTCAAA GGTCCCGAGGGCCCGATCACGAAGGACCTAGACAGAGACATATTACAAGCAAAGAGCAATGATTGCCCTACCACC AAGCATGAACTTGCGAAAGACATACTCAAAAGATTTCGGAGGGAAGAAGTTGACGGATTGGATGATCTTCTAGCA ATTCTCAGTTCACGCCACACATCTTGGCCAAGAGACATGGCGATCATTTCAGGACTCATTGTTGGAATCGAATTG CCAGAAAACTACCCCCAACAGAAGATTTATCAAGAGATTCTGCAGAAGCTTGGCAAAATATCACATGCGCATCTG TTCCACAATTCAGCAACTATGACGAATGGATACAACTGGTGCCCTACAAACATCTATGATCTACCTGTTACACTT TCAGCCGATGTCCTCCAGATTGAAGAGAATGGGAATTTGTTCGGAGATTGGAATATCATTTCTCTTGATTTTCTC AAAGACGAAAGCGTTGTCTTAGGTCATGCCCATCCACTCATAGAAGGAAAGGTTCGCCTCGCCCAAAAAGAGAAA GACAAGCATATCCTACTCATTGAGCCTGATCCCACTCTTAGTGAGACTAGAATAAGCAGAGGCCTTCTGGTCAAG CCTTCGTTTAGGCGCGATAAGATTCATTTCGATTGTTATTGTGATTATGTCGGCCCGGTTTATTTCCATCCGCCA TTAATCAGGTCAAATATCCCAAATTTTGACCCGAATGATCTATTCAAGATTCACGTTGGAAAAGATGAGACGACG CACGATGGCAGCCATCAAAGCACCGAAAGGAGCCAAAATGCTCAGAGCATGATCGAGGATATGAAAAATGGTTTA CTCAATCCGCAATACAGGAAACGGGAAAGTGATTTGAAAACACTTGACCTTACCGCATGGGACCAATTGAAATTA TCAGAAGAGTTGATAAAGGCCGCCGGTGAAGGTGATTACAACAACACAAAAGCTCTCCTGGAGAAGATACGGGAT CCGAACCAAAGTGATAAATCAGGGTGGTCTGCATTACATCATGCCGTTTGGTATGGCCAAACAAAGGTAGCCAAG CTGCTTGTCAAAAGGTTGAATCCTCAACAGCAGACTGCCAGTGGCGAAGAACCACTTCACCTCGCGGCAGACCGT GGCAATGAAGAACTGATGAGGATACTGCTGGCACGCTCTACTCCTAACTTGAATCGAGAAGATGGATTGAATGCT CTACATCTGGCAGCGATGAATAATGTGACTGGAATCGTGGATGAACTCTTACAAAAGTGGGATATCAACGCAACT GGTGTTAAGAAGCAGACTGCATTACATATGGCATCGTTTCGGGGCCATGAAGATGTAGTACATGTCCTGACCAAG CAAAATGCCAAACACGATCTCAAAGACTGCGACCAGGAAACCGCTTTGTCACTAGCAGTTTTCAACGGCCACGTA AATACCGTGCGGTTACTCAAAGCGGCAAAAGCTGATCTTGATGTCCGAGATAATGATGGCTGGACTCTGCTTCAT CGAGCAGTGAACAGAGGTCATATTCCCGCTATCGAGACACTCGCCAAACTAGGAGCGAATCTCGAAGCCCAAGAT AATGATGGCTGGACTCCGCTTCAATGGGCGGCGATCAAAGGTTATATTACCGCTATCGAGACACTCGCCAAACTA GGAGCGAATCTCGAAGCCCAAGATAATAATGGCCGGACTCCGCTTCAATGCGTAGCAAGCAACGGTCATATTCCC GCTATCGAGACACTCGCCAAACTAGGAGCGAATCTCGAAGCCCAAGATAATAGTGGCCGGACTCCGCTTCAATGG GCAGTGAGCAACGGTCATGTCACCGCTGTCAAGATACTCTGTGACCTCAAAGCTAGGTCTCAACAAGTATAG |