© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1448.t1 |
| Gene name | |
| Location | scaffold_01:3815292..3817157 |
| Strand | + |
| Gene length (bp) | 1865 |
| Transcript length (bp) | 1584 |
| Coding sequence length (bp) | 1584 |
| Protein length (aa) | 528 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.4E-64 | 50 | 490 |
| PF00324 | AA_permease | Amino acid permease | 6.0E-23 | 72 | 501 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 84 | 103 | 19 |
| 2 | 138 | 160 | 22 |
| 3 | 175 | 197 | 22 |
| 4 | 204 | 226 | 22 |
| 5 | 241 | 263 | 22 |
| 6 | 284 | 306 | 22 |
| 7 | 333 | 355 | 22 |
| 8 | 380 | 399 | 19 |
| 9 | 404 | 426 | 22 |
| 10 | 447 | 469 | 22 |
| 11 | 484 | 501 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1448.t1 MERLEMLSLERGNIVIGKAAPDQDANVSNAYDTPRKKTGPPEQASPKRLFNFTQIFFFSLTYLSSWETQALNLST VLSNGGPEALAWGIVIVVFGAMAQSASLAEMASMQPIAGAQYHWTHYLAPTSQKKFITWMQGWVTWFAWISTLAG VANTTATMIQGLASVNYPEYEPKQWHITLIIIGMLIVEALMNMYTFWLIPWIEMLAGILHICLLIVFLVVFTALA PRHTPEFVFLHTQSASGWATFPAWNIGLLTPVWGFVGFDGAVHMSEEVRRAKQAVPRSIFYTVVANGILAYAMVV CMLFTMGSVEEAQKSSFPIIEICRQATGSVKAATAMVSGLLVISLSVNLASIASVSRLTWAWARDGALPQWFSYI DRKHNVPIRAVWLPVIVVMILACLNIADGAAFGAFVALGSIGLFVSYFIAISCMVHNRFQKHVAPLGNWNMGIWG LPVNVFALAYTAWVTVWLAFPSALPVTGENMNYAAPIFGITTLFAFVYWFIKGRTRWEGLNKEVIRLAVEGGELQ LK* |
| Coding | >Pro_DTO377G3_2|g1448.t1 ATGGAGCGCCTTGAGATGCTCTCCTTGGAAAGGGGAAATATAGTCATTGGAAAAGCCGCGCCAGATCAAGATGCA AATGTCTCCAATGCCTATGACACCCCGCGTAAAAAGACTGGACCCCCGGAGCAGGCTTCGCCTAAGCGTCTTTTT AATTTCACCCAGATATTCTTCTTCTCACTTACTTACTTGTCGAGCTGGGAAACTCAGGCTTTGAATCTGAGCACA GTGCTCTCAAATGGCGGACCTGAAGCCCTAGCTTGGGGTATAGTAATTGTGGTATTCGGCGCAATGGCTCAATCA GCCTCGCTAGCCGAGATGGCATCGATGCAACCAATTGCCGGGGCTCAGTATCACTGGACACATTACTTGGCACCG ACAAGCCAGAAGAAGTTCATCACTTGGATGCAGGGTTGGGTGACGTGGTTTGCGTGGATCTCCACACTCGCCGGT GTTGCCAACACCACTGCTACGATGATTCAGGGCCTAGCAAGTGTGAACTACCCCGAGTACGAACCAAAGCAATGG CACATAACCCTCATCATTATTGGCATGCTTATTGTCGAAGCGTTGATGAACATGTATACATTTTGGCTGATTCCG TGGATCGAGATGCTGGCCGGTATTCTGCACATTTGCCTTTTGATCGTGTTTCTGGTTGTATTCACGGCTCTAGCA CCTCGTCACACGCCGGAGTTTGTCTTTCTACACACGCAAAGCGCCTCGGGCTGGGCGACTTTCCCCGCATGGAAT ATAGGTCTGCTTACTCCTGTCTGGGGGTTTGTTGGATTTGACGGCGCAGTACATATGAGTGAAGAAGTCCGTCGA GCAAAACAAGCCGTTCCTAGGTCTATCTTCTATACCGTCGTTGCCAACGGTATCCTGGCATATGCAATGGTTGTC TGCATGCTCTTCACGATGGGCTCTGTGGAGGAAGCCCAGAAATCAAGCTTTCCGATAATCGAGATCTGCCGGCAA GCAACGGGGTCGGTGAAAGCAGCCACTGCGATGGTCAGCGGGCTACTCGTAATCTCGCTGTCGGTAAATCTGGCG AGTATCGCGTCTGTCTCGCGATTGACGTGGGCGTGGGCTCGTGATGGGGCCCTGCCGCAGTGGTTTAGCTATATC GACCGCAAGCACAACGTGCCAATTCGCGCTGTTTGGCTCCCAGTAATCGTCGTCATGATCCTCGCGTGTTTGAAC ATCGCTGACGGTGCCGCTTTTGGGGCGTTCGTTGCACTGGGGTCGATTGGCCTCTTCGTGTCATATTTTATTGCT ATTAGTTGCATGGTGCATAATCGGTTTCAGAAGCATGTGGCACCGCTTGGGAACTGGAATATGGGCATCTGGGGA CTTCCAGTTAATGTCTTTGCTTTGGCGTATACTGCCTGGGTTACAGTGTGGCTAGCATTTCCGTCAGCGTTGCCG GTTACTGGTGAGAACATGAATTATGCGGCACCCATTTTTGGTATCACTACCTTGTTCGCTTTTGTATATTGGTTT ATCAAGGGTCGGACTCGCTGGGAGGGATTGAATAAGGAGGTTATTCGACTGGCTGTGGAGGGGGGAGAACTTCAG TTGAAATGA |
| Transcript | >Pro_DTO377G3_2|g1448.t1 ATGGAGCGCCTTGAGATGCTCTCCTTGGAAAGGGGAAATATAGTCATTGGAAAAGCCGCGCCAGATCAAGATGCA AATGTCTCCAATGCCTATGACACCCCGCGTAAAAAGACTGGACCCCCGGAGCAGGCTTCGCCTAAGCGTCTTTTT AATTTCACCCAGATATTCTTCTTCTCACTTACTTACTTGTCGAGCTGGGAAACTCAGGCTTTGAATCTGAGCACA GTGCTCTCAAATGGCGGACCTGAAGCCCTAGCTTGGGGTATAGTAATTGTGGTATTCGGCGCAATGGCTCAATCA GCCTCGCTAGCCGAGATGGCATCGATGCAACCAATTGCCGGGGCTCAGTATCACTGGACACATTACTTGGCACCG ACAAGCCAGAAGAAGTTCATCACTTGGATGCAGGGTTGGGTGACGTGGTTTGCGTGGATCTCCACACTCGCCGGT GTTGCCAACACCACTGCTACGATGATTCAGGGCCTAGCAAGTGTGAACTACCCCGAGTACGAACCAAAGCAATGG CACATAACCCTCATCATTATTGGCATGCTTATTGTCGAAGCGTTGATGAACATGTATACATTTTGGCTGATTCCG TGGATCGAGATGCTGGCCGGTATTCTGCACATTTGCCTTTTGATCGTGTTTCTGGTTGTATTCACGGCTCTAGCA CCTCGTCACACGCCGGAGTTTGTCTTTCTACACACGCAAAGCGCCTCGGGCTGGGCGACTTTCCCCGCATGGAAT ATAGGTCTGCTTACTCCTGTCTGGGGGTTTGTTGGATTTGACGGCGCAGTACATATGAGTGAAGAAGTCCGTCGA GCAAAACAAGCCGTTCCTAGGTCTATCTTCTATACCGTCGTTGCCAACGGTATCCTGGCATATGCAATGGTTGTC TGCATGCTCTTCACGATGGGCTCTGTGGAGGAAGCCCAGAAATCAAGCTTTCCGATAATCGAGATCTGCCGGCAA GCAACGGGGTCGGTGAAAGCAGCCACTGCGATGGTCAGCGGGCTACTCGTAATCTCGCTGTCGGTAAATCTGGCG AGTATCGCGTCTGTCTCGCGATTGACGTGGGCGTGGGCTCGTGATGGGGCCCTGCCGCAGTGGTTTAGCTATATC GACCGCAAGCACAACGTGCCAATTCGCGCTGTTTGGCTCCCAGTAATCGTCGTCATGATCCTCGCGTGTTTGAAC ATCGCTGACGGTGCCGCTTTTGGGGCGTTCGTTGCACTGGGGTCGATTGGCCTCTTCGTGTCATATTTTATTGCT ATTAGTTGCATGGTGCATAATCGGTTTCAGAAGCATGTGGCACCGCTTGGGAACTGGAATATGGGCATCTGGGGA CTTCCAGTTAATGTCTTTGCTTTGGCGTATACTGCCTGGGTTACAGTGTGGCTAGCATTTCCGTCAGCGTTGCCG GTTACTGGTGAGAACATGAATTATGCGGCACCCATTTTTGGTATCACTACCTTGTTCGCTTTTGTATATTGGTTT ATCAAGGGTCGGACTCGCTGGGAGGGATTGAATAAGGAGGTTATTCGACTGGCTGTGGAGGGGGGAGAACTTCAG TTGAAATGA |
| Gene | >Pro_DTO377G3_2|g1448.t1 ATGGAGCGCCTTGAGATGCTCTCCTTGGAAAGGGGAAATATAGTCATTGGAAAAGCCGCGCCAGATCAAGATGCA AATGTCTCCAATGCCTATGACACCCCGCGTAAAAAGACTGGACCCCCGGAGCAGGCTTCGCCTAAGGTACGATAC GATTTGTTAAGTCAATAAAGTCTGCCAGCTGAGACAGTATACAGCGTCTTTTTAATTTCACCCAGATATTCTTCT TCTCACTTACTTACTTGTCGAGCTGGGAAACTCAGGCTTTGTACGGAAGTCTTATCCCTTGTTGTGCTTCAGTAC TAATAACACCGCCACGACTTAGGAATCTGAGCACAGTGCTCTCAAATGGCGGACCTGAAGCCCTAGCTTGGGGTA TAGTAATTGTGGTATTCGGCGCAATGGCTCAATCAGCCTCGCTAGCCGAGATGGCATCGATGCAACCAATTGCCG GGGCTCAGTATCACTGGACACATTACTTGGCACCGACAAGCCAGAAGAAGTTCATCACTTGGATGCAGGGTGTGT CACTTATCGAGTACTGCCTGACTCAATGCTAACTTCATATAGGTTGGGTGACGTGGTTTGCGTGGATCTCCACAC TCGCCGGTGTTGCCAACACCACTGCTACGATGATTCAGGGCCTAGCAAGTGTGAACTACCCCGAGTACGAACCAA AGCAATGGCACATAACCCTCATCATTATTGGCATGCTTATTGTCGAAGCGTTGATGAACATGTATACATTTTGGC TGATTCCGTGGATCGAGATGCTGGCCGGTATTCTGCACATTTGCCTTTTGATCGTGTTTCTGGTTGTATTCACGG CTCTAGCACCTCGTCACACGCCGGAGTTTGTCTTTCTACACACGCAAAGCGCCTCGGGCTGGGCGACTTTCCCCG CATGGAATATAGGTCTGCTTACTCCTGTCTGGGGGTTTGTTGGTGCGTACACACTGAATACTTGGAGCAGGTAAA GACTGAAAGCTAACCATCGCAGGATTTGACGGCGCAGTACATATGAGTGAAGAAGTCCGTCGAGCAAAACAAGCC GTTCCTAGGTCTATCTTCTATACCGTCGTTGCCAACGGTATCCTGGCATATGCAATGGTTGTCTGCATGCTCTTC ACGATGGGCTCTGTGGAGGAAGCCCAGAAATCAAGCTTTCCGATAATCGAGATCTGCCGGCAAGCAACGGGGTCG GTGAAAGCAGCCACTGCGATGGTCAGCGGGCTACTCGTAATCTCGCTGTCGGTAAATCTGGCGAGTATCGCGTCT GTCTCGCGATTGACGTGGGCGTGGGCTCGTGATGGGGCCCTGCCGCAGTGGTTTAGCTATGTATGTATCTCGCAC CAGACGGTGCCACGGAAGACGACGCAGAATATATAAGCTGACAAGAACGGCAGATCGACCGCAAGCACAACGTGC CAATTCGCGCTGTTTGGCTCCCAGTAATCGTCGTCATGATCCTCGCGTGTTTGAACATCGCTGACGGTGCCGCTT TTGGGGCGTTCGTTGCACTGGGGTCGATTGGCCTCTTCGTGTCATATTTTATTGCTATTAGTTGCATGGTGCATA ATCGGTTTCAGAAGCATGTGGCACCGCTTGGGAACTGGAATATGGGCATCTGGGGACTTCCAGTTAATGTCTTTG CTTTGGCGTATACTGCCTGGGTTACAGTGTGGCTAGCATTTCCGTCAGCGTTGCCGGTTACTGGTGAGAACATGA ATTATGCGGCACCCATTTTTGGTATCACTACCTTGTTCGCTTTTGTATATTGGTTTATCAAGGGTCGGACTCGCT GGGAGGGATTGAATAAGGAGGTTATTCGACTGGCTGTGGAGGGGGGAGAACTTCAGTTGAAATGA |