© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g141.t1 |
| Gene name | |
| Location | scaffold_01:353557..355044 |
| Strand | + |
| Gene length (bp) | 1487 |
| Transcript length (bp) | 1428 |
| Coding sequence length (bp) | 1428 |
| Protein length (aa) | 476 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01554 | MatE | MatE | 7.7E-29 | 44 | 206 |
| PF01554 | MatE | MatE | 6.6E-17 | 269 | 425 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0015297 | antiporter activity | Yes |
| GO:0042910 | xenobiotic transmembrane transporter activity | Yes |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 119 | 136 | 17 |
| 2 | 151 | 173 | 22 |
| 3 | 186 | 208 | 22 |
| 4 | 218 | 240 | 22 |
| 5 | 263 | 285 | 22 |
| 6 | 305 | 327 | 22 |
| 7 | 340 | 362 | 22 |
| 8 | 372 | 389 | 17 |
| 9 | 410 | 432 | 22 |
| 10 | 436 | 458 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g141.t1 MISEDHGGIEYSPLLRNIDPEAADNSKKSGWRQELAIISRYSAPLMISLLLQHALTGSSIFMVGHLGKREIGAVS LANMTSQITGYFVFQGLSTCLDTLCPQAYGSGNLTLVGLHVQRLTLFMIVLTIPIGAVWWNADRIFLLILPSEAQ ETALLAGLYLKIAIAGAPGYACFESGKRFFQAQGLFSASLLVLVLCSTLNIFMGWLFVWRLQWGFVGAPIAVAVA NSLLPIFLAFYAIFIKGSECWHPLSAKMWRSWGPMLKLAIPSWLMIEAEVLAWEIMTLISSHLGATELAAQAAIS TLSDFAFQISFSIAVAGGTHIAYLIGAGLPQRAATSANVMVFASFGAGITNMLVILALRSVIPGLFSDIGEVWHL IFFLLPVGAVLQIPDAVATSLNSLLRAVGRPDLGSYVQLSIYYLVGLPLGIALAFGLGWSVFGLWCGIFIGQSII VLIEGFYFWKMVDWAKASREAVERM* |
| Coding | >Pro_DTO377G3_2|g141.t1 ATGATCTCCGAAGACCATGGGGGTATAGAATACTCCCCGTTGCTGCGCAACATCGATCCAGAAGCGGCAGACAAT TCCAAGAAGTCAGGATGGCGACAGGAATTAGCGATTATCTCGCGATATTCAGCCCCCCTAATGATATCGCTCCTA CTTCAGCATGCATTGACCGGCTCTAGCATCTTCATGGTGGGCCATCTGGGGAAACGAGAAATTGGGGCCGTGAGC TTGGCCAACATGACTTCCCAGATCACTGGATATTTTGTCTTTCAAGGCCTATCAACATGTTTGGATACGTTATGT CCTCAAGCATATGGCTCAGGGAATTTGACCTTGGTCGGCCTTCACGTTCAACGCCTGACGCTTTTCATGATCGTC CTCACAATTCCAATCGGGGCTGTATGGTGGAATGCGGATCGAATATTTCTCCTCATCCTACCGTCTGAAGCCCAG GAGACAGCTCTTCTTGCAGGGCTGTATCTGAAAATTGCCATCGCGGGCGCTCCTGGCTATGCTTGCTTTGAGTCC GGAAAGCGATTTTTCCAGGCACAGGGATTATTCAGTGCTAGTCTGCTAGTTCTTGTATTATGTTCTACGTTGAAT ATTTTCATGGGCTGGTTATTTGTTTGGAGACTGCAATGGGGCTTCGTCGGTGCACCCATCGCTGTTGCAGTCGCA AATAGTCTTCTGCCTATCTTTCTGGCATTCTACGCCATCTTCATTAAGGGCTCTGAGTGCTGGCACCCCCTTTCT GCCAAGATGTGGCGCAGCTGGGGTCCAATGTTGAAGCTTGCTATACCGAGTTGGCTAATGATCGAAGCCGAGGTC CTTGCGTGGGAAATCATGACACTCATTTCGTCCCATTTAGGTGCGACTGAGCTCGCAGCTCAGGCTGCTATATCG ACACTTTCAGACTTTGCCTTTCAAATCTCATTTTCCATCGCCGTTGCTGGTGGCACACACATTGCCTATCTGATT GGAGCAGGTCTCCCACAGCGTGCAGCAACATCAGCCAACGTTATGGTTTTTGCGTCCTTCGGTGCGGGCATAACA AATATGCTTGTGATTCTTGCTCTGCGGAGCGTCATCCCTGGCTTATTTAGTGATATTGGAGAGGTCTGGCACTTG ATCTTCTTTTTGCTTCCAGTGGGTGCCGTCCTTCAAATTCCCGACGCCGTGGCCACTTCCCTCAATAGCTTGCTG CGAGCTGTGGGACGACCGGATCTGGGTAGCTATGTTCAGCTCTCGATCTACTACCTCGTCGGATTGCCCCTGGGC ATTGCTTTAGCATTTGGCCTAGGTTGGAGCGTTTTCGGGCTATGGTGTGGAATTTTTATCGGCCAATCGATCATT GTGTTGATCGAGGGTTTTTATTTCTGGAAAATGGTGGACTGGGCGAAGGCATCCCGAGAAGCTGTAGAGCGGATG TGA |
| Transcript | >Pro_DTO377G3_2|g141.t1 ATGATCTCCGAAGACCATGGGGGTATAGAATACTCCCCGTTGCTGCGCAACATCGATCCAGAAGCGGCAGACAAT TCCAAGAAGTCAGGATGGCGACAGGAATTAGCGATTATCTCGCGATATTCAGCCCCCCTAATGATATCGCTCCTA CTTCAGCATGCATTGACCGGCTCTAGCATCTTCATGGTGGGCCATCTGGGGAAACGAGAAATTGGGGCCGTGAGC TTGGCCAACATGACTTCCCAGATCACTGGATATTTTGTCTTTCAAGGCCTATCAACATGTTTGGATACGTTATGT CCTCAAGCATATGGCTCAGGGAATTTGACCTTGGTCGGCCTTCACGTTCAACGCCTGACGCTTTTCATGATCGTC CTCACAATTCCAATCGGGGCTGTATGGTGGAATGCGGATCGAATATTTCTCCTCATCCTACCGTCTGAAGCCCAG GAGACAGCTCTTCTTGCAGGGCTGTATCTGAAAATTGCCATCGCGGGCGCTCCTGGCTATGCTTGCTTTGAGTCC GGAAAGCGATTTTTCCAGGCACAGGGATTATTCAGTGCTAGTCTGCTAGTTCTTGTATTATGTTCTACGTTGAAT ATTTTCATGGGCTGGTTATTTGTTTGGAGACTGCAATGGGGCTTCGTCGGTGCACCCATCGCTGTTGCAGTCGCA AATAGTCTTCTGCCTATCTTTCTGGCATTCTACGCCATCTTCATTAAGGGCTCTGAGTGCTGGCACCCCCTTTCT GCCAAGATGTGGCGCAGCTGGGGTCCAATGTTGAAGCTTGCTATACCGAGTTGGCTAATGATCGAAGCCGAGGTC CTTGCGTGGGAAATCATGACACTCATTTCGTCCCATTTAGGTGCGACTGAGCTCGCAGCTCAGGCTGCTATATCG ACACTTTCAGACTTTGCCTTTCAAATCTCATTTTCCATCGCCGTTGCTGGTGGCACACACATTGCCTATCTGATT GGAGCAGGTCTCCCACAGCGTGCAGCAACATCAGCCAACGTTATGGTTTTTGCGTCCTTCGGTGCGGGCATAACA AATATGCTTGTGATTCTTGCTCTGCGGAGCGTCATCCCTGGCTTATTTAGTGATATTGGAGAGGTCTGGCACTTG ATCTTCTTTTTGCTTCCAGTGGGTGCCGTCCTTCAAATTCCCGACGCCGTGGCCACTTCCCTCAATAGCTTGCTG CGAGCTGTGGGACGACCGGATCTGGGTAGCTATGTTCAGCTCTCGATCTACTACCTCGTCGGATTGCCCCTGGGC ATTGCTTTAGCATTTGGCCTAGGTTGGAGCGTTTTCGGGCTATGGTGTGGAATTTTTATCGGCCAATCGATCATT GTGTTGATCGAGGGTTTTTATTTCTGGAAAATGGTGGACTGGGCGAAGGCATCCCGAGAAGCTGTAGAGCGGATG TGA |
| Gene | >Pro_DTO377G3_2|g141.t1 ATGATCTCCGAAGACCATGGGGGTATAGAATACTCCCCGTTGCTGCGCAACATCGATCCAGAAGCGGCAGACAAT TCCAAGAAGTCAGGATGGCGACAGGAATTAGCGATTATCTCGCGATATTCAGCCCCCCTAATGATATCGCTCCTA CTTCAGCATGCATTGACCGGCTCTAGCATCTTCATGGTGGGCCATCTGGGGAAACGAGAAATTGGGGCCGTGAGC TTGGCCAACATGACTTCCCAGATCACTGGATATTTTGTCTTTCAAGGCCTATCAACATGTTTGGATACGTTATGT CCTCAAGCATATGGCTCAGGGAATTTGACCTTGGTCGGCCTTCACGTTCAACGCCTGACGCTTTTCATGATCGTC CTCACAATTCCAATCGGGGCTGTATGGTGGAATGCGGATCGAATATTTCTCCTCATCCTACCGTCTGAAGCCCAG GAGACAGCTCTTCTTGCAGGGCTGTATCTGAAAATTGCCATCGCGGGCGCTCCTGGCTATGCTTGCTTTGAGTCC GGAAAGCGATTTTTCCAGGCACAGGGATTATTCAGTGCTAGTCTGCTAGTTCTTGTATTATGTTCTACGTTGAAT ATTTTCATGGGCTGGTTATTTGTTTGGGTATATTATTCCTCCTTAGAACTCCCCGAGCCATCCACTGATTTCCCG TTCTTTTCCAGAGACTGCAATGGGGCTTCGTCGGTGCACCCATCGCTGTTGCAGTCGCAAATAGTCTTCTGCCTA TCTTTCTGGCATTCTACGCCATCTTCATTAAGGGCTCTGAGTGCTGGCACCCCCTTTCTGCCAAGATGTGGCGCA GCTGGGGTCCAATGTTGAAGCTTGCTATACCGAGTTGGCTAATGATCGAAGCCGAGGTCCTTGCGTGGGAAATCA TGACACTCATTTCGTCCCATTTAGGTGCGACTGAGCTCGCAGCTCAGGCTGCTATATCGACACTTTCAGACTTTG CCTTTCAAATCTCATTTTCCATCGCCGTTGCTGGTGGCACACACATTGCCTATCTGATTGGAGCAGGTCTCCCAC AGCGTGCAGCAACATCAGCCAACGTTATGGTTTTTGCGTCCTTCGGTGCGGGCATAACAAATATGCTTGTGATTC TTGCTCTGCGGAGCGTCATCCCTGGCTTATTTAGTGATATTGGAGAGGTCTGGCACTTGATCTTCTTTTTGCTTC CAGTGGGTGCCGTCCTTCAAATTCCCGACGCCGTGGCCACTTCCCTCAATAGCTTGCTGCGAGCTGTGGGACGAC CGGATCTGGGTAGCTATGTTCAGCTCTCGATCTACTACCTCGTCGGATTGCCCCTGGGCATTGCTTTAGCATTTG GCCTAGGTTGGAGCGTTTTCGGGCTATGGTGTGGAATTTTTATCGGCCAATCGATCATTGTGTTGATCGAGGGTT TTTATTTCTGGAAAATGGTGGACTGGGCGAAGGCATCCCGAGAAGCTGTAGAGCGGATGTGA |