Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1367.t1
Gene name
Locationscaffold_01:3600397..3601067
Strand-
Gene length (bp)670
Transcript length (bp)522
Coding sequence length (bp)522
Protein length (aa) 174

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 1.4E-30 7 144

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 44 66 22
3 71 93 22
4 128 150 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1367.t1
MGLRGVQLGLRAWEFVFSLLVMALVGNMIAEAFAGNPATVNYSIYTSVFSMFTLFYLVPASFNIDWSGHPLIMII
IDALNCIFFFCAAIALAAKLECHSCTNHEYLINNEITNGSHNMTKRCREAQASVAFLWFAWAGYMASVIVSAFMA
RSSAGPSRRTSRRGGARPNMTQV*
Coding >Pro_DTO377G3_2|g1367.t1
ATGGGTCTCAGAGGTGTGCAGCTCGGTCTCAGAGCCTGGGAGTTTGTATTCTCCCTGCTCGTCATGGCCCTCGTC
GGTAACATGATCGCTGAAGCTTTCGCCGGCAACCCAGCGACCGTAAACTACTCCATCTATACATCGGTCTTCTCG
ATGTTCACGTTGTTCTACCTGGTCCCAGCCTCGTTCAACATCGACTGGTCCGGCCACCCCCTCATCATGATCATC
ATCGACGCCCTGAACTGCATCTTCTTCTTCTGCGCTGCCATCGCGCTCGCGGCGAAGCTAGAGTGCCACTCTTGC
ACCAACCACGAGTACCTTATCAACAATGAGATCACCAATGGCTCACACAACATGACCAAGCGTTGCCGTGAAGCC
CAGGCCTCCGTTGCTTTCCTCTGGTTCGCCTGGGCCGGCTACATGGCCTCCGTCATTGTCTCCGCCTTCATGGCC
CGTTCCTCTGCTGGTCCCTCGCGCCGTACTAGCCGTCGCGGCGGTGCCCGCCCCAACATGACCCAGGTTTAA
Transcript >Pro_DTO377G3_2|g1367.t1
ATGGGTCTCAGAGGTGTGCAGCTCGGTCTCAGAGCCTGGGAGTTTGTATTCTCCCTGCTCGTCATGGCCCTCGTC
GGTAACATGATCGCTGAAGCTTTCGCCGGCAACCCAGCGACCGTAAACTACTCCATCTATACATCGGTCTTCTCG
ATGTTCACGTTGTTCTACCTGGTCCCAGCCTCGTTCAACATCGACTGGTCCGGCCACCCCCTCATCATGATCATC
ATCGACGCCCTGAACTGCATCTTCTTCTTCTGCGCTGCCATCGCGCTCGCGGCGAAGCTAGAGTGCCACTCTTGC
ACCAACCACGAGTACCTTATCAACAATGAGATCACCAATGGCTCACACAACATGACCAAGCGTTGCCGTGAAGCC
CAGGCCTCCGTTGCTTTCCTCTGGTTCGCCTGGGCCGGCTACATGGCCTCCGTCATTGTCTCCGCCTTCATGGCC
CGTTCCTCTGCTGGTCCCTCGCGCCGTACTAGCCGTCGCGGCGGTGCCCGCCCCAACATGACCCAGGTTTAA
Gene >Pro_DTO377G3_2|g1367.t1
ATGGGTCTCAGAGGTGTGCAGCTCGGTCTCAGAGCCTGGGAGGTGAGTGCAATTGCAATGCGACAGCTAGAAGCT
TAAAGCTTGAAGCTATAAGAATCCCAAGTTGAATATAGTACTGACCCATTACAGTTTGTATTCTCCCTGCTCGTC
ATGGCCCTCGTCGGTAACATGATCGCTGAAGCTTTCGCCGGCAACCCAGCGACCGTAAACTACTCCATCTATACA
TCGGTCTTCTCGATGTTCACGTTGTTCTACCTGGTCCCAGCCTCGTTCAACATCGACTGGTCCGGCCACCCCCTC
ATCATGATCATCATCGACGCCCTGAACTGCATCTTCTTCTTCTGCGCTGCCATCGCGCTCGCGGCGAAGCTAGAG
TGCCACTCTTGCACCAACCACGTAAGTTGACTTGAATGGATTGCAAATATAAGACATGAGAGCGAACGCTAACTC
CCTCTAGGAGTACCTTATCAACAATGAGATCACCAATGGCTCACACAACATGACCAAGCGTTGCCGTGAAGCCCA
GGCCTCCGTTGCTTTCCTCTGGTTCGCCTGGGCCGGCTACATGGCCTCCGTCATTGTCTCCGCCTTCATGGCCCG
TTCCTCTGCTGGTCCCTCGCGCCGTACTAGCCGTCGCGGCGGTGCCCGCCCCAACATGACCCAGGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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