© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g136.t1 |
| Gene name | |
| Location | scaffold_01:341409..342715 |
| Strand | + |
| Gene length (bp) | 1306 |
| Transcript length (bp) | 1191 |
| Coding sequence length (bp) | 1191 |
| Protein length (aa) | 397 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05208 | ALG3 | ALG3 protein | 2.8E-139 | 25 | 378 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000030 | mannosyltransferase activity | Yes |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 74 | 91 | 17 |
| 3 | 98 | 120 | 22 |
| 4 | 142 | 164 | 22 |
| 5 | 171 | 193 | 22 |
| 6 | 203 | 225 | 22 |
| 7 | 258 | 280 | 22 |
| 8 | 311 | 333 | 22 |
| 9 | 345 | 362 | 17 |
| 10 | 377 | 394 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g136.t1 MASTDKSFVYDVLTNQRHTKWIAALLILGDALLCTLVIWKIAYTEIDWSTYMQQVSLYISGEHDYTLIKGSTGPL VYPAAHVYIYTLLYHITNQGRDILLGQVLFGLLYLATLAVVVACYRQTGAPPYLFPLLVLSKRLHSIFVLRMFND AAATFAMWLAIYLCLRRSWTAGIAVWSFGVAIKMTLVLLAPAIAVITLLSLGLVRSLSLGAMAILIQLLLALPFL QTNSTGYFSRAFELSRQFVFEWTVNWRFVGEETFLSTEFSVGLLVLHLSLLAIFFKNWVKPSGSDMVPFLEETLQ GRQKTVTLPKSFTMTVMLSSLAIGMLCARSLHYQFFAYLAWATPFLLWRAGLHPILMYALWALQEWAWNVFPSTN TSSTVVVLSLAVQVFGVFFNG* |
| Coding | >Pro_DTO377G3_2|g136.t1 ATGGCATCGACAGACAAGAGCTTCGTCTACGACGTGCTCACTAATCAGCGTCACACAAAATGGATTGCAGCTCTA CTCATTCTAGGCGACGCGTTACTCTGCACTCTCGTCATATGGAAAATCGCTTACACTGAGATTGACTGGTCGACA TATATGCAGCAAGTTTCTCTATATATCTCCGGTGAACATGACTACACCCTGATCAAAGGCTCAACCGGTCCGCTC GTCTACCCCGCCGCCCACGTATACATCTACACCCTCCTCTATCACATCACCAATCAAGGCCGTGATATTCTCCTC GGACAGGTGCTCTTCGGCCTGCTCTACCTGGCTACACTGGCTGTGGTAGTTGCCTGCTACAGGCAAACGGGGGCA CCACCCTACCTTTTCCCGCTCCTTGTTCTGTCCAAACGGCTACATAGCATATTCGTCCTGCGTATGTTTAATGAT GCGGCCGCGACTTTCGCTATGTGGCTCGCTATCTACCTGTGTCTGAGACGCAGTTGGACGGCGGGAATTGCAGTG TGGTCTTTCGGGGTTGCAATTAAAATGACACTTGTGCTGCTTGCACCTGCCATTGCGGTCATCACCCTTCTCAGT TTGGGATTGGTGCGAAGTCTTTCGCTTGGAGCTATGGCTATTCTTATCCAGCTCCTGCTTGCACTTCCCTTCCTC CAGACGAACAGTACAGGCTACTTTTCTCGGGCATTTGAGCTATCTCGCCAATTTGTGTTCGAATGGACAGTGAAC TGGCGATTTGTGGGAGAAGAGACATTCCTCTCAACGGAGTTCTCTGTGGGCTTGCTAGTGCTGCATTTATCCTTG TTGGCTATCTTCTTCAAAAACTGGGTAAAGCCTTCAGGGTCGGACATGGTTCCCTTCCTCGAAGAAACTCTCCAG GGACGCCAAAAGACAGTTACACTCCCAAAATCCTTCACTATGACCGTGATGTTGAGCTCACTGGCCATCGGAATG CTATGTGCCAGGTCCTTGCATTACCAGTTTTTCGCGTATCTCGCGTGGGCTACCCCATTTCTTCTCTGGCGCGCA GGTCTCCACCCAATTCTTATGTACGCCTTATGGGCGCTGCAAGAGTGGGCTTGGAACGTTTTCCCCAGCACAAAC ACAAGCTCGACGGTTGTGGTGTTGTCACTCGCGGTCCAGGTCTTTGGCGTGTTTTTCAATGGATAA |
| Transcript | >Pro_DTO377G3_2|g136.t1 ATGGCATCGACAGACAAGAGCTTCGTCTACGACGTGCTCACTAATCAGCGTCACACAAAATGGATTGCAGCTCTA CTCATTCTAGGCGACGCGTTACTCTGCACTCTCGTCATATGGAAAATCGCTTACACTGAGATTGACTGGTCGACA TATATGCAGCAAGTTTCTCTATATATCTCCGGTGAACATGACTACACCCTGATCAAAGGCTCAACCGGTCCGCTC GTCTACCCCGCCGCCCACGTATACATCTACACCCTCCTCTATCACATCACCAATCAAGGCCGTGATATTCTCCTC GGACAGGTGCTCTTCGGCCTGCTCTACCTGGCTACACTGGCTGTGGTAGTTGCCTGCTACAGGCAAACGGGGGCA CCACCCTACCTTTTCCCGCTCCTTGTTCTGTCCAAACGGCTACATAGCATATTCGTCCTGCGTATGTTTAATGAT GCGGCCGCGACTTTCGCTATGTGGCTCGCTATCTACCTGTGTCTGAGACGCAGTTGGACGGCGGGAATTGCAGTG TGGTCTTTCGGGGTTGCAATTAAAATGACACTTGTGCTGCTTGCACCTGCCATTGCGGTCATCACCCTTCTCAGT TTGGGATTGGTGCGAAGTCTTTCGCTTGGAGCTATGGCTATTCTTATCCAGCTCCTGCTTGCACTTCCCTTCCTC CAGACGAACAGTACAGGCTACTTTTCTCGGGCATTTGAGCTATCTCGCCAATTTGTGTTCGAATGGACAGTGAAC TGGCGATTTGTGGGAGAAGAGACATTCCTCTCAACGGAGTTCTCTGTGGGCTTGCTAGTGCTGCATTTATCCTTG TTGGCTATCTTCTTCAAAAACTGGGTAAAGCCTTCAGGGTCGGACATGGTTCCCTTCCTCGAAGAAACTCTCCAG GGACGCCAAAAGACAGTTACACTCCCAAAATCCTTCACTATGACCGTGATGTTGAGCTCACTGGCCATCGGAATG CTATGTGCCAGGTCCTTGCATTACCAGTTTTTCGCGTATCTCGCGTGGGCTACCCCATTTCTTCTCTGGCGCGCA GGTCTCCACCCAATTCTTATGTACGCCTTATGGGCGCTGCAAGAGTGGGCTTGGAACGTTTTCCCCAGCACAAAC ACAAGCTCGACGGTTGTGGTGTTGTCACTCGCGGTCCAGGTCTTTGGCGTGTTTTTCAATGGATAA |
| Gene | >Pro_DTO377G3_2|g136.t1 ATGGCATCGACAGACAAGAGCTTCGTCTACGACGTGCTCACTAATCAGCGTCACACAAAATGGATTGCAGCTCTA CTCATTCTAGGCGACGCGTTACTCTGCACTCTCGTCATATGGAAAATCGCTTGTAAGACCGCGTCCATTGGGTAC CGAACCAGATCTAGCTAACCAAGCAACAACCCCAGACACTGAGATTGACTGGTCGACATATATGCAGCAAGTTTC TCTATATATCTCCGGTGAACATGACTACACCCTGATCAAAGGCTCAACCGGTCCGCTCGTCTACCCCGCCGCCCA CGTATACATCTACACCCTCCTCTATCACATCACCAATCAAGGCCGTGATATTCTCCTCGGACAGGTGCTCTTCGG CCTGCTCTACCTGGCTACACTGGCTGTGGTAGTTGCCTGCTACAGGCAAACGGGGGCACCACCCTACCTTTTCCC GCTCCTTGTTCTGTCCAAACGGCTACATAGCATATTCGTCCTGCGTATGTTTAATGATGCGGCCGCGACTTTCGC TATGTGGCTCGCTATCTACCTGTGTCTGAGACGCAGTTGGACGGCGGGAATTGCAGTGTGGTCTTTCGGGGTTGC AATTAAAATGACACTTGTGCTGCTTGCACCTGCCATTGCGGTCATCACCCTTCTCAGTTTGGGATTGGTGCGAAG TCTTTCGCTTGGAGCTATGGCTATTCTTATCCAGGTGGGTTCTTCTCAAGTCAATGAGTTCTGGGGAGTGGGCTA ACGAAAGAAACTACAGCTCCTGCTTGCACTTCCCTTCCTCCAGACGAACAGTACAGGCTACTTTTCTCGGGCATT TGAGCTATCTCGCCAATTTGTGTTCGAATGGACAGTGAACTGGCGATTTGTGGGAGAAGAGACATTCCTCTCAAC GGAGTTCTCTGTGGGCTTGCTAGTGCTGCATTTATCCTTGTTGGCTATCTTCTTCAAAAACTGGGTAAAGCCTTC AGGGTCGGACATGGTTCCCTTCCTCGAAGAAACTCTCCAGGGACGCCAAAAGACAGTTACACTCCCAAAATCCTT CACTATGACCGTGATGTTGAGCTCACTGGCCATCGGAATGCTATGTGCCAGGTCCTTGCATTACCAGTTTTTCGC GTATCTCGCGTGGGCTACCCCATTTCTTCTCTGGCGCGCAGGTCTCCACCCAATTCTTATGTACGCCTTATGGGC GCTGCAAGAGTGGGCTTGGAACGTTTTCCCCAGCACAAACACAAGCTCGACGGTTGTGGTGTTGTCACTCGCGGT CCAGGTCTTTGGCGTGTTTTTCAATGGATAA |