Protein ID | Pro_DTO377G3_2|g1359.t1 |
Gene name | |
Location | scaffold_01:3582651..3584027 |
Strand | - |
Gene length (bp) | 1376 |
Transcript length (bp) | 1218 |
Coding sequence length (bp) | 1218 |
Protein length (aa) | 406 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02535 | Zip | ZIP Zinc transporter | 2.2E-58 | 81 | 402 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0030001 | metal ion transport | Yes |
GO:0046873 | metal ion transmembrane transporter activity | Yes |
GO:0022890 | inorganic cation transmembrane transporter activity | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0051234 | establishment of localization | No |
GO:0008324 | cation transmembrane transporter activity | No |
GO:0003674 | molecular_function | No |
GO:0006812 | cation transport | No |
GO:0006811 | ion transport | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0051179 | localization | No |
GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
GO:0005215 | transporter activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0009987 | cellular process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 28 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
2 | 80 | 102 | 22 |
3 | 109 | 131 | 22 |
4 | 146 | 168 | 22 |
5 | 301 | 323 | 22 |
6 | 350 | 372 | 22 |
7 | 385 | 404 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1359.t1 MASRFFPSRRTGIALLAGCFLFSALAAANVGPGGLSVGQIEEQLQSCPLVESLNEHKRATRPESTSLTAKIFAVL FPSTPAVNALLATLYISGPPNFLLALCPPNIDPSSLSVMVAFAVGGLLGDTLFHLLPEIFVGEASPDHVSFVMVE PNKNLLLGLGIMVGFFTFVAMDKTLRIATGGEGGHDHSHSHAHTEPVDAVTSGADSKKTSGELKKRKSAAKESAE VVPEKEINPSVKLGGYLNLIADFTHNITDGLALSSSFYASPTIGATTTVAVFFHEIPHEVGDFALLIQSGFSKRK AMGAQFVTAIGAFLGTFIGIAVQEFGGNGTMLDDSKSAGLLGTSLTWGDMLLPFTAGTFLYVGTVAVIPELLETG KDKGVEVRKTITQFLAVALGAGIMLAISWD* |
Coding | >Pro_DTO377G3_2|g1359.t1 ATGGCTTCTCGCTTTTTTCCATCACGCAGGACAGGCATTGCCCTTCTTGCAGGATGCTTTTTGTTCTCAGCCTTA GCTGCAGCTAATGTTGGTCCCGGAGGGCTCTCCGTGGGTCAGATCGAGGAGCAATTGCAGAGCTGCCCACTAGTC GAGTCTCTCAATGAGCACAAGCGTGCAACTCGTCCAGAGTCCACTAGCTTGACAGCGAAGATCTTTGCTGTCCTC TTCCCGAGCACCCCAGCCGTGAACGCGCTTCTGGCAACTTTGTATATCTCCGGCCCACCTAACTTCCTCCTGGCA CTATGCCCACCCAACATCGACCCCTCCTCTCTGTCAGTGATGGTTGCATTTGCCGTCGGCGGCTTACTTGGCGAC ACCCTCTTCCACCTACTCCCCGAGATCTTTGTCGGCGAAGCCTCCCCCGACCACGTGAGCTTCGTAATGGTCGAG CCAAACAAGAACCTCCTTCTGGGTCTGGGAATCATGGTCGGATTCTTCACCTTCGTGGCAATGGACAAAACCCTG CGCATCGCCACTGGCGGCGAGGGCGGTCATGACCACTCGCACAGCCACGCGCACACAGAACCAGTCGATGCAGTT ACATCCGGAGCTGACAGCAAGAAGACCAGCGGCGAGCTGAAGAAGCGCAAGTCTGCTGCCAAGGAGTCCGCTGAG GTCGTTCCCGAGAAAGAAATCAACCCCAGCGTCAAGCTTGGCGGTTACCTGAATCTCATCGCTGACTTCACCCAT AACATCACTGATGGCCTTGCTCTTTCCTCTTCTTTCTATGCCTCACCTACTATCGGCGCGACGACCACTGTGGCT GTCTTCTTCCACGAAATCCCCCATGAAGTCGGTGACTTTGCTCTGCTGATTCAGTCTGGCTTCTCGAAGCGCAAG GCCATGGGCGCGCAATTCGTGACCGCTATTGGTGCGTTCTTGGGCACTTTTATTGGAATCGCTGTCCAGGAATTC GGTGGCAATGGCACTATGTTGGATGATAGCAAGTCTGCTGGTCTTCTGGGAACTAGCCTTACTTGGGGTGATATG CTTCTTCCGTTCACGGCGGGCACATTCTTGTATGTTGGCACCGTGGCTGTGATTCCGGAGTTGCTGGAGACTGGC AAGGATAAGGGCGTTGAGGTGCGGAAGACTATCACGCAGTTCTTGGCTGTTGCTCTTGGAGCCGGTATTATGCTT GCTATTTCTTGGGATTGA |
Transcript | >Pro_DTO377G3_2|g1359.t1 ATGGCTTCTCGCTTTTTTCCATCACGCAGGACAGGCATTGCCCTTCTTGCAGGATGCTTTTTGTTCTCAGCCTTA GCTGCAGCTAATGTTGGTCCCGGAGGGCTCTCCGTGGGTCAGATCGAGGAGCAATTGCAGAGCTGCCCACTAGTC GAGTCTCTCAATGAGCACAAGCGTGCAACTCGTCCAGAGTCCACTAGCTTGACAGCGAAGATCTTTGCTGTCCTC TTCCCGAGCACCCCAGCCGTGAACGCGCTTCTGGCAACTTTGTATATCTCCGGCCCACCTAACTTCCTCCTGGCA CTATGCCCACCCAACATCGACCCCTCCTCTCTGTCAGTGATGGTTGCATTTGCCGTCGGCGGCTTACTTGGCGAC ACCCTCTTCCACCTACTCCCCGAGATCTTTGTCGGCGAAGCCTCCCCCGACCACGTGAGCTTCGTAATGGTCGAG CCAAACAAGAACCTCCTTCTGGGTCTGGGAATCATGGTCGGATTCTTCACCTTCGTGGCAATGGACAAAACCCTG CGCATCGCCACTGGCGGCGAGGGCGGTCATGACCACTCGCACAGCCACGCGCACACAGAACCAGTCGATGCAGTT ACATCCGGAGCTGACAGCAAGAAGACCAGCGGCGAGCTGAAGAAGCGCAAGTCTGCTGCCAAGGAGTCCGCTGAG GTCGTTCCCGAGAAAGAAATCAACCCCAGCGTCAAGCTTGGCGGTTACCTGAATCTCATCGCTGACTTCACCCAT AACATCACTGATGGCCTTGCTCTTTCCTCTTCTTTCTATGCCTCACCTACTATCGGCGCGACGACCACTGTGGCT GTCTTCTTCCACGAAATCCCCCATGAAGTCGGTGACTTTGCTCTGCTGATTCAGTCTGGCTTCTCGAAGCGCAAG GCCATGGGCGCGCAATTCGTGACCGCTATTGGTGCGTTCTTGGGCACTTTTATTGGAATCGCTGTCCAGGAATTC GGTGGCAATGGCACTATGTTGGATGATAGCAAGTCTGCTGGTCTTCTGGGAACTAGCCTTACTTGGGGTGATATG CTTCTTCCGTTCACGGCGGGCACATTCTTGTATGTTGGCACCGTGGCTGTGATTCCGGAGTTGCTGGAGACTGGC AAGGATAAGGGCGTTGAGGTGCGGAAGACTATCACGCAGTTCTTGGCTGTTGCTCTTGGAGCCGGTATTATGCTT GCTATTTCTTGGGATTGA |
Gene | >Pro_DTO377G3_2|g1359.t1 ATGGCTTCTCGCTTTTTTCCATCACGCAGGACAGGCATTGCCCTTCTTGCAGGATGCTTTTTGTTCTCAGCCTTA GCTGCAGCTAATGTTGGTCCCGGAGGGCTCTCCGTGGGTCAGATCGAGGAGCAATTGCAGGTATGCTGTACAAGT ACTGTGTGTCCTACATGTAAACTGACCTGCCACAGAGCTGCCCACTAGTCGAGTCTCTCAATGAGCACAAGCGTG CAACTCGTCCAGAGTCCACTAGCTTGACAGCGAAGATCTTTGCTGTCCTCTTCCCGAGCACCCCAGCCGTGAACG CGCTTCTGGCAACTTTGTATATCTCCGGCCCACCTAGTAAGTATTCCCTCGGTACTCGTGATATGCCTCTGCTAA CTGCTCTAGACTTCCTCCTGGCACTATGCCCACCCAACATCGACCCCTCCTCTCTGTCAGTGATGGTTGCATTTG CCGTCGGCGGCTTACTTGGCGACACCCTCTTCCACCTACTCCCCGAGATCTTTGTCGGCGAAGCCTCCCCCGACC ACGTGAGCTTCGTAATGGTCGAGCCAAACAAGAACCTCCTTCTGGGTCTGGGAATCATGGTCGGATTCTTCACCT TCGTGGCAATGGACAAAACCCTGCGCATCGCCACTGGCGGCGAGGGCGGTCATGACCACTCGCACAGCCACGCGC ACACAGAACCAGTCGATGCAGTTACATCCGGAGCTGACAGCAAGAAGACCAGCGGCGAGCTGAAGAAGCGCAAGT CTGCTGCCAAGGAGTCCGCTGAGGTCGTTCCCGAGAAAGAAATCAACCCCAGCGTCAAGCTTGGCGGTTACCTGA ATCTCATCGCTGACTTCACCCATAACATCACTGATGGCCTTGCTCTTTCCTCTTCTTTCTATGCCTCACCTACTA TCGGCGCGACGACCACTGTGGCTGTCTTCTTCCACGAAATCCCCCATGAAGTCGGTGACTTTGCTCTGCTGATTC AGTCTGGCTTCTCGAAGCGCAAGGCCATGGGCGCGCAATTCGTGACCGCTATTGGTGCGTTCTTGGGCACTTTTA TTGGAATCGCTGTCCAGGAATTCGGTGGCAATGGCACTATGTTGGATGATAGCAAGTCTGCTGGTCTTCTGGGAA CTAGCCTTACTTGGGGTGATATGCTTCTTCCGTTCACGGCGGGCACATTCTTGTATGTTGGCACCGTGGCTGTGA TTCCGGAGTTGCTGGAGACTGGCAAGGATAAGGGCGTTGAGGTGCGGAAGACTATCACGCAGTTCTTGGCTGTTG CTCTTGGAGCCGGTATTATGCTTGCGTAAGTATCCATTCGCCCCGCCATGCTTTCCAGGCACAATATCACTGACA CGCTTTATAGTATTTCTTGGGATTGA |