Protein ID | Pro_DTO377G3_2|g1340.t1 |
Gene name | |
Location | scaffold_01:3530701..3533220 |
Strand | - |
Gene length (bp) | 2519 |
Transcript length (bp) | 2367 |
Coding sequence length (bp) | 2367 |
Protein length (aa) | 789 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00069 | Pkinase | Protein kinase domain | 1.4E-73 | 66 | 317 |
PF07714 | PK_Tyr_Ser-Thr | Protein tyrosine and serine/threonine kinase | 1.3E-35 | 68 | 313 |
PF16579 | AdenylateSensor | Adenylate sensor of SNF1-like protein kinase | 5.5E-12 | 717 | 784 |
PF08587 | UBA_2 | Ubiquitin associated domain (UBA) | 4.6E-13 | 359 | 400 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004672 | protein kinase activity | Yes |
GO:0004674 | protein serine/threonine kinase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0006468 | protein phosphorylation | Yes |
GO:0017076 | purine nucleotide binding | No |
GO:0008152 | metabolic process | No |
GO:0000166 | nucleotide binding | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0016740 | transferase activity | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0071704 | organic substance metabolic process | No |
GO:0036211 | protein modification process | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0005488 | binding | No |
GO:0008150 | biological_process | No |
GO:0019538 | protein metabolic process | No |
GO:0043167 | ion binding | No |
GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0003824 | catalytic activity | No |
GO:0032553 | ribonucleotide binding | No |
GO:0044238 | primary metabolic process | No |
GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
GO:0009987 | cellular process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0016310 | phosphorylation | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0006793 | phosphorus metabolic process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0043412 | macromolecule modification | No |
GO:0036094 | small molecule binding | No |
GO:0016301 | kinase activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0006796 | phosphate-containing compound metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 28 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 108.07 | 65.21 | 150.93 |
5d_25C | Five days - 25 degrees Celsius | 94.59 | 57.51 | 131.67 |
7d_25C | Seven days - 25 degrees Celsius | 84.21 | 51.25 | 117.17 |
10d_25C | Ten days - 25 degrees Celsius | 85.05 | 51.80 | 118.29 |
7d_15C | Seven days - 15 degrees Celsius | 146.78 | 84.75 | 208.80 |
7d_30C | Seven days - 30 degrees Celsius | 63.98 | 38.86 | 89.10 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.621837 | no |
3d_25C | 7d_25C | 0.289107 | no |
3d_25C | 7d_15C | 0.199428 | no |
3d_25C | 7d_30C | 0.008469 | yes |
3d_25C | 10d_25C | 0.316145 | no |
5d_25C | 7d_25C | 0.675082 | no |
5d_25C | 7d_15C | 0.043772 | yes |
5d_25C | 7d_30C | 0.063859 | no |
5d_25C | 10d_25C | 0.711409 | no |
7d_25C | 7d_15C | 0.007779 | yes |
7d_25C | 7d_30C | 0.231210 | no |
7d_25C | 10d_25C | 0.978969 | no |
7d_15C | 7d_30C | 0.000700 | yes |
7d_15C | 10d_25C | 0.008807 | yes |
7d_30C | 10d_25C | 0.207398 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1340.t1 MAAAFDEEDLAIPLPSDRDRPRERARPPASNPSAMAMPAPSRPTSKIEDPLQSPSTTRDMQRLDQYQTIRVLGEG SFGKVKLAIHQPTGRQVALKIISRRKLLSRDMVGRVEREIQYLQLLRHPHIIKLYTVIATKTDIVMVLEYAEREL FDYLVRKGRCGDDEARKFFQQIICAVEYCHRHKIVHRDLKPENLLIDNQKNVKIADFGLSNIMTDGNFLKTSCGS PNYAAPEVISGKLYAGPEVDVWSCGVILYVLLVGRLPFDDDYIPALFKKIAAGTFHIPGYVSSGAARLIRAMLQV HPVHRITIPEIREDPWFKKNLPKYLEPPREEFIAPGVDPKKVDSARLDIAKPISVQSKIHRIAVSKLERSMGYGR EDIEEALRQAEPSAIKDAFSIVVENEMMQTNSPSDVNLLAQNAQKGAAPSSADRTPAPRHQGTPAAPTMDRTASA SRRRASEDPQQSDEDELRVSHVRILPTSLPYVHDQLMEQRDRDKRARNQMLEQRRQEAIKLDPEGQGSAYRDMSP EEQAATARALKPHSRSVVDLDKLRFEPPTGQPLEKQPKRSRKWQFGIRSRNQPYEAMLYLYRAIAAQGGLWDIQP VESGTNIGPDATPSPDKPKPLQSKYPDLPSDYYIPKDPWFIRARLLKEGINPPGDTTSAYSSRSDLEELRRRFNI SGISAPTEDRSREPQSSVPESASAASSVNVPSGLQKITYGVWVFLDIQLYQLEENNYMVDFKCDGYQNVIRAHGE TEWHPISRRLKNKEKEVTSPYPFLDVASDLVAQLAVAS* |
Coding | >Pro_DTO377G3_2|g1340.t1 ATGGCCGCTGCATTCGACGAGGAAGACCTCGCTATTCCCCTCCCCTCCGACCGTGATCGTCCGCGTGAACGTGCG AGACCTCCCGCCTCCAACCCCTCCGCCATGGCAATGCCCGCGCCCTCGAGGCCGACCAGCAAGATCGAGGACCCA TTGCAGTCACCGTCGACTACCCGAGATATGCAACGCCTCGACCAGTACCAGACTATACGGGTCTTGGGCGAGGGT TCCTTTGGCAAGGTGAAGCTTGCTATCCACCAGCCAACTGGACGTCAAGTTGCTCTGAAGATCATCTCCCGACGC AAACTACTCTCCAGAGATATGGTTGGGCGCGTGGAGCGAGAAATCCAGTACTTGCAATTGCTACGACATCCACAC ATCATCAAATTGTATACGGTGATTGCGACCAAGACCGATATTGTGATGGTGCTGGAGTACGCAGAGCGAGAGTTG TTCGATTATCTCGTGAGGAAGGGAAGATGCGGCGACGATGAAGCCCGGAAATTCTTCCAGCAAATCATCTGTGCT GTGGAATACTGCCACCGACACAAGATTGTACACCGTGACTTGAAGCCTGAGAACCTGCTCATCGACAACCAGAAG AACGTTAAGATTGCGGATTTCGGTTTGAGTAATATTATGACGGATGGCAACTTCCTGAAGACCAGCTGCGGTAGC CCGAACTACGCTGCGCCAGAGGTCATCTCCGGAAAGCTCTATGCTGGTCCTGAGGTCGATGTGTGGAGTTGTGGT GTCATTCTGTATGTGTTGTTGGTGGGCCGCTTGCCTTTCGATGATGACTATATTCCAGCCCTTTTCAAGAAGATT GCAGCGGGCACCTTCCACATACCTGGATATGTTTCATCCGGGGCAGCTCGTTTGATCCGGGCAATGCTCCAAGTT CACCCCGTCCACCGCATTACAATCCCTGAGATCAGAGAAGACCCATGGTTTAAGAAGAATCTCCCCAAGTACCTA GAACCACCACGAGAGGAATTCATCGCCCCGGGGGTGGACCCGAAGAAGGTTGATTCTGCAAGGCTTGACATAGCA AAGCCTATATCGGTTCAAAGCAAAATCCATCGAATTGCAGTTTCCAAGCTCGAACGAAGCATGGGATATGGCCGA GAAGATATCGAAGAGGCATTGAGACAAGCTGAACCCAGCGCGATCAAGGATGCGTTCTCCATCGTTGTTGAGAAT GAGATGATGCAAACTAATTCACCCTCGGATGTTAATTTGTTAGCTCAAAATGCCCAGAAAGGAGCTGCGCCTTCA TCTGCGGATCGGACTCCTGCGCCTCGTCATCAAGGGACCCCGGCCGCCCCCACCATGGACAGGACCGCTAGTGCA TCGCGCCGTAGGGCCTCGGAAGATCCACAGCAATCAGACGAGGACGAACTCCGCGTTAGCCACGTCCGAATCCTC CCTACTAGCTTGCCGTACGTTCACGACCAACTCATGGAACAACGTGATCGAGATAAAAGAGCTCGCAACCAAATG CTCGAGCAGCGTCGCCAAGAGGCCATCAAGCTTGACCCAGAGGGACAGGGATCTGCCTATCGGGACATGTCTCCC GAAGAACAGGCTGCCACAGCCCGTGCATTGAAGCCCCACTCACGCAGTGTCGTCGACTTGGACAAGTTGCGATTC GAGCCGCCAACCGGTCAACCCCTAGAAAAACAGCCCAAACGGAGCCGTAAATGGCAGTTTGGTATTCGGTCCCGA AACCAGCCATATGAGGCCATGCTGTATCTGTACCGGGCAATTGCTGCCCAGGGTGGATTGTGGGATATTCAACCC GTGGAATCAGGCACCAATATTGGTCCCGATGCGACCCCCTCCCCTGATAAGCCCAAACCCTTGCAGAGCAAATAC CCCGACCTCCCATCCGACTACTACATTCCCAAGGACCCATGGTTTATCCGTGCACGCCTGCTGAAAGAAGGCATC AACCCTCCTGGAGACACCACCAGTGCTTACAGTAGCCGCAGTGACCTCGAGGAACTGCGCCGCCGTTTCAACATC TCGGGAATCTCTGCCCCAACGGAAGACCGAAGCAGAGAACCCCAGTCCTCCGTCCCCGAGAGCGCTAGTGCGGCC TCCTCAGTCAATGTACCAAGCGGACTCCAGAAGATCACCTACGGTGTCTGGGTCTTCCTCGACATACAGCTCTAC CAACTCGAAGAGAACAACTACATGGTCGACTTCAAATGCGATGGCTACCAGAACGTGATCCGCGCTCATGGCGAA ACCGAATGGCATCCCATCAGCAGACGCCTCAAGAACAAGGAGAAGGAGGTGACCAGTCCTTACCCCTTCCTCGAT GTGGCGTCTGATCTCGTCGCCCAGCTGGCTGTGGCAAGCTAG |
Transcript | >Pro_DTO377G3_2|g1340.t1 ATGGCCGCTGCATTCGACGAGGAAGACCTCGCTATTCCCCTCCCCTCCGACCGTGATCGTCCGCGTGAACGTGCG AGACCTCCCGCCTCCAACCCCTCCGCCATGGCAATGCCCGCGCCCTCGAGGCCGACCAGCAAGATCGAGGACCCA TTGCAGTCACCGTCGACTACCCGAGATATGCAACGCCTCGACCAGTACCAGACTATACGGGTCTTGGGCGAGGGT TCCTTTGGCAAGGTGAAGCTTGCTATCCACCAGCCAACTGGACGTCAAGTTGCTCTGAAGATCATCTCCCGACGC AAACTACTCTCCAGAGATATGGTTGGGCGCGTGGAGCGAGAAATCCAGTACTTGCAATTGCTACGACATCCACAC ATCATCAAATTGTATACGGTGATTGCGACCAAGACCGATATTGTGATGGTGCTGGAGTACGCAGAGCGAGAGTTG TTCGATTATCTCGTGAGGAAGGGAAGATGCGGCGACGATGAAGCCCGGAAATTCTTCCAGCAAATCATCTGTGCT GTGGAATACTGCCACCGACACAAGATTGTACACCGTGACTTGAAGCCTGAGAACCTGCTCATCGACAACCAGAAG AACGTTAAGATTGCGGATTTCGGTTTGAGTAATATTATGACGGATGGCAACTTCCTGAAGACCAGCTGCGGTAGC CCGAACTACGCTGCGCCAGAGGTCATCTCCGGAAAGCTCTATGCTGGTCCTGAGGTCGATGTGTGGAGTTGTGGT GTCATTCTGTATGTGTTGTTGGTGGGCCGCTTGCCTTTCGATGATGACTATATTCCAGCCCTTTTCAAGAAGATT GCAGCGGGCACCTTCCACATACCTGGATATGTTTCATCCGGGGCAGCTCGTTTGATCCGGGCAATGCTCCAAGTT CACCCCGTCCACCGCATTACAATCCCTGAGATCAGAGAAGACCCATGGTTTAAGAAGAATCTCCCCAAGTACCTA GAACCACCACGAGAGGAATTCATCGCCCCGGGGGTGGACCCGAAGAAGGTTGATTCTGCAAGGCTTGACATAGCA AAGCCTATATCGGTTCAAAGCAAAATCCATCGAATTGCAGTTTCCAAGCTCGAACGAAGCATGGGATATGGCCGA GAAGATATCGAAGAGGCATTGAGACAAGCTGAACCCAGCGCGATCAAGGATGCGTTCTCCATCGTTGTTGAGAAT GAGATGATGCAAACTAATTCACCCTCGGATGTTAATTTGTTAGCTCAAAATGCCCAGAAAGGAGCTGCGCCTTCA TCTGCGGATCGGACTCCTGCGCCTCGTCATCAAGGGACCCCGGCCGCCCCCACCATGGACAGGACCGCTAGTGCA TCGCGCCGTAGGGCCTCGGAAGATCCACAGCAATCAGACGAGGACGAACTCCGCGTTAGCCACGTCCGAATCCTC CCTACTAGCTTGCCGTACGTTCACGACCAACTCATGGAACAACGTGATCGAGATAAAAGAGCTCGCAACCAAATG CTCGAGCAGCGTCGCCAAGAGGCCATCAAGCTTGACCCAGAGGGACAGGGATCTGCCTATCGGGACATGTCTCCC GAAGAACAGGCTGCCACAGCCCGTGCATTGAAGCCCCACTCACGCAGTGTCGTCGACTTGGACAAGTTGCGATTC GAGCCGCCAACCGGTCAACCCCTAGAAAAACAGCCCAAACGGAGCCGTAAATGGCAGTTTGGTATTCGGTCCCGA AACCAGCCATATGAGGCCATGCTGTATCTGTACCGGGCAATTGCTGCCCAGGGTGGATTGTGGGATATTCAACCC GTGGAATCAGGCACCAATATTGGTCCCGATGCGACCCCCTCCCCTGATAAGCCCAAACCCTTGCAGAGCAAATAC CCCGACCTCCCATCCGACTACTACATTCCCAAGGACCCATGGTTTATCCGTGCACGCCTGCTGAAAGAAGGCATC AACCCTCCTGGAGACACCACCAGTGCTTACAGTAGCCGCAGTGACCTCGAGGAACTGCGCCGCCGTTTCAACATC TCGGGAATCTCTGCCCCAACGGAAGACCGAAGCAGAGAACCCCAGTCCTCCGTCCCCGAGAGCGCTAGTGCGGCC TCCTCAGTCAATGTACCAAGCGGACTCCAGAAGATCACCTACGGTGTCTGGGTCTTCCTCGACATACAGCTCTAC CAACTCGAAGAGAACAACTACATGGTCGACTTCAAATGCGATGGCTACCAGAACGTGATCCGCGCTCATGGCGAA ACCGAATGGCATCCCATCAGCAGACGCCTCAAGAACAAGGAGAAGGAGGTGACCAGTCCTTACCCCTTCCTCGAT GTGGCGTCTGATCTCGTCGCCCAGCTGGCTGTGGCAAGCTAG |
Gene | >Pro_DTO377G3_2|g1340.t1 ATGGCCGCTGCATTCGACGAGGAAGACCTCGCTATTCCCCTCCCCTCCGACCGTGATCGTCCGCGTGAACGTGCG AGACCTCCCGCCTCCAACCCCTCCGCCATGGCAATGCCCGCGCCCTCGAGGCCGACCAGCAAGATCGAGGACCCA TTGCAGTCACCGTCGACTACCCGAGATATGCAACGCCTCGACCAGTACCAGACTATACGGGTCTTGGGCGAGGGT TCCTTTGGCAAGGTGAAGCTTGCTATCCACCAGCCAACTGGACGTCAAGTTGCTCTGAAGATCATCTCCCGACGC AAACTACTCTCCAGAGATATGGTTGGGCGCGTGGAGCGAGAAATCCAGTACTTGCAATTGCTACGACATCCACAC ATCATCAAATTGTACAATTTCAATCCACACTGAAATTGGGATTTCAGTTGGCTGACCAATGATTTAGGTATACGG TGATTGCGACCAAGACCGATATTGTGATGGTGCTGGAGTACGCAGAGCGAGAGTTGTTCGATTATCTCGTGAGGA AGGGAAGATGCGGCGACGATGAAGCCCGGAAATTCTTCCAGCAAATCATCTGTGCTGTGGAATACTGCCACCGAC ACAAGATTGTACACCGTGACTTGAAGCCTGAGAACCTGCTCATCGACAACCAGAAGAACGTTAAGATTGCGGATT TCGGTTTGAGTAATATTATGACGGATGGCAACTTCCTGAAGACCAGCTGCGGTAGCCCGAACTACGCTGCGCCAG AGGTCATCTCCGGAAAGCTCTATGCTGGTCCTGAGGTCGATGTGTGGAGTTGTGGTGTCATTCTGTATGTGTTGT TGGTGGGCCGCTTGCCTTTCGATGATGACTATATTCCAGCCCTTTTCAAGAAGATTGCAGCGGGCACCTTCCACA TACCTGGATATGTTTCATCCGGGGCAGCTCGTTTGATCCGGGCAATGCTCCAAGTTCACCCCGTCCACCGCATTA CAATCCCTGAGATCAGAGAAGACCCATGGTTTAAGAAGAATCTCCCCAAGTACCTAGAACCACCACGAGAGGAAT TCATCGCCCCGGGGGTGGACCCGAAGAAGGTTGATTCTGCAAGGCTTGACATAGCAAAGCCTATATCGGTTCAAA GCAAAATCCATCGAATTGCAGTTTCCAAGCTCGAACGAAGCATGGGATATGGCCGAGAAGATATCGAAGAGGCAT TGAGACAAGCTGAACCCAGCGCGATCAAGGATGCGTTCTCCATCGTTGTTGAGAATGAGATGATGCAAACTAATT GTAAGTCTTGATCTACTAAACTAACCTACCTCTGCTAACGACGATAGCACCCTCGGATGTTAATTTGTTAGCTCA AAATGCCCAGAAAGGAGCTGCGCCTTCATCTGCGGATCGGACTCCTGCGCCTCGTCATCAAGGGACCCCGGCCGC CCCCACCATGGACAGGACCGCTAGTGCATCGCGCCGTAGGGCCTCGGAAGATCCACAGCAATCAGACGAGGACGA ACTCCGCGTTAGCCACGTCCGAATCCTCCCTACTAGCTTGCCGTACGTTCACGACCAACTCATGGAACAACGTGA TCGAGATAAAAGAGCTCGCAACCAAATGCTCGAGCAGCGTCGCCAAGAGGCCATCAAGCTTGACCCAGAGGGACA GGGATCTGCCTATCGGGACATGTCTCCCGAAGAACAGGCTGCCACAGCCCGTGCATTGAAGCCCCACTCACGCAG TGTCGTCGACTTGGACAAGTTGCGATTCGAGCCGCCAACCGGTCAACCCCTAGAAAAACAGCCCAAACGGAGCCG TAAATGGCAGTTTGGTATTCGGTCCCGAAACCAGCCATATGAGGCCATGCTGTATCTGTACCGGGCAATTGCTGC CCAGGGTGGATTGTGGGATATTCAACCCGTGGAATCAGGTATGTTTCCACCCATTACTCATTTTGAGCCGATTCT TATATTCTCTAGGCACCAATATTGGTCCCGATGCGACCCCCTCCCCTGATAAGCCCAAACCCTTGCAGAGCAAAT ACCCCGACCTCCCATCCGACTACTACATTCCCAAGGACCCATGGTTTATCCGTGCACGCCTGCTGAAAGAAGGCA TCAACCCTCCTGGAGACACCACCAGTGCTTACAGTAGCCGCAGTGACCTCGAGGAACTGCGCCGCCGTTTCAACA TCTCGGGAATCTCTGCCCCAACGGAAGACCGAAGCAGAGAACCCCAGTCCTCCGTCCCCGAGAGCGCTAGTGCGG CCTCCTCAGTCAATGTACCAAGCGGACTCCAGAAGATCACCTACGGTGTCTGGGTCTTCCTCGACATACAGCTCT ACCAACTCGAAGAGAACAACTACATGGTCGACTTCAAATGCGATGGCTACCAGAACGTGATCCGCGCTCATGGCG AAACCGAATGGCATCCCATCAGCAGACGCCTCAAGAACAAGGAGAAGGAGGTGACCAGTCCTTACCCCTTCCTCG ATGTGGCGTCTGATCTCGTCGCCCAGCTGGCTGTGGCAAGCTAG |