Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1336.t1
Gene name
Locationscaffold_01:3519604..3520537
Strand+
Gene length (bp)933
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 1.9E-44 12 276

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1336.t1
MAGLTETQVASFKENGYLVLPNYLAPTEVTALLAETNKLLEEFPLESHPLTQFTTGDETADHVGDDYFLNSGDKI
RFFFEPDAFSTEPDPVTGRAALLKPKNRAVNKIGHSLHTLSPPFKAISLNERNAAVARSLGFVDPRVLQSMVICK
QPSIGGAVPSHRDSEFLYTDPPSAVGWWYALQDAGPANGTLGMYKGSHTGRKGGHIARRFVRRENGAGTEFIENR
GPALPKGMEEEKSEEATDEDLEILDIKAGSLVLIHGNVLHKSEKNTSLNSRYAYTFHVIEGADGWEYDVRNWLQP
PAGGFSKLNA*
Coding >Pro_DTO377G3_2|g1336.t1
ATGGCTGGACTTACCGAAACTCAGGTCGCCTCCTTCAAGGAGAACGGGTACCTCGTCCTCCCCAACTACCTCGCC
CCAACCGAAGTCACCGCTCTCCTCGCCGAGACAAACAAACTCCTTGAGGAATTCCCACTAGAATCCCACCCCCTC
ACCCAGTTCACAACGGGCGACGAAACCGCCGACCATGTCGGCGACGACTACTTCCTAAACTCGGGCGACAAAATC
CGCTTCTTTTTCGAGCCCGACGCGTTCAGCACCGAGCCGGATCCAGTGACCGGTCGCGCCGCGCTCCTGAAGCCC
AAAAACCGCGCCGTCAACAAGATCGGTCACTCGCTGCATACCCTATCGCCTCCTTTCAAGGCCATCTCGCTCAAC
GAGCGGAACGCTGCTGTCGCGCGGTCCCTGGGATTCGTCGATCCACGCGTGCTGCAGAGTATGGTTATCTGCAAG
CAGCCCTCGATTGGTGGGGCCGTGCCATCCCATCGCGATTCGGAGTTTTTGTATACGGATCCACCCTCTGCTGTG
GGTTGGTGGTATGCGCTGCAGGATGCGGGACCGGCGAATGGGACGTTGGGTATGTACAAGGGGTCGCATACGGGA
AGGAAGGGTGGTCATATTGCTAGGAGGTTTGTGAGGAGGGAGAATGGGGCGGGGACGGAGTTTATTGAGAATCGG
GGGCCTGCGCTCCCCAAAGGCATGGAGGAGGAGAAGAGTGAGGAGGCTACAGATGAGGATTTGGAGATTCTTGAT
ATCAAGGCTGGATCGCTTGTGCTCATTCATGGGAATGTTTTGCATAAGAGTGAGAAGAATACCAGCCTCAATAGT
CGGTATGCTTATACCTTCCATGTTATTGAGGGTGCCGATGGGTGGGAGTATGATGTGCGAAATTGGTTGCAGCCG
CCTGCTGGTGGGTTCTCAAAGTTGAATGCTTGA
Transcript >Pro_DTO377G3_2|g1336.t1
ATGGCTGGACTTACCGAAACTCAGGTCGCCTCCTTCAAGGAGAACGGGTACCTCGTCCTCCCCAACTACCTCGCC
CCAACCGAAGTCACCGCTCTCCTCGCCGAGACAAACAAACTCCTTGAGGAATTCCCACTAGAATCCCACCCCCTC
ACCCAGTTCACAACGGGCGACGAAACCGCCGACCATGTCGGCGACGACTACTTCCTAAACTCGGGCGACAAAATC
CGCTTCTTTTTCGAGCCCGACGCGTTCAGCACCGAGCCGGATCCAGTGACCGGTCGCGCCGCGCTCCTGAAGCCC
AAAAACCGCGCCGTCAACAAGATCGGTCACTCGCTGCATACCCTATCGCCTCCTTTCAAGGCCATCTCGCTCAAC
GAGCGGAACGCTGCTGTCGCGCGGTCCCTGGGATTCGTCGATCCACGCGTGCTGCAGAGTATGGTTATCTGCAAG
CAGCCCTCGATTGGTGGGGCCGTGCCATCCCATCGCGATTCGGAGTTTTTGTATACGGATCCACCCTCTGCTGTG
GGTTGGTGGTATGCGCTGCAGGATGCGGGACCGGCGAATGGGACGTTGGGTATGTACAAGGGGTCGCATACGGGA
AGGAAGGGTGGTCATATTGCTAGGAGGTTTGTGAGGAGGGAGAATGGGGCGGGGACGGAGTTTATTGAGAATCGG
GGGCCTGCGCTCCCCAAAGGCATGGAGGAGGAGAAGAGTGAGGAGGCTACAGATGAGGATTTGGAGATTCTTGAT
ATCAAGGCTGGATCGCTTGTGCTCATTCATGGGAATGTTTTGCATAAGAGTGAGAAGAATACCAGCCTCAATAGT
CGGTATGCTTATACCTTCCATGTTATTGAGGGTGCCGATGGGTGGGAGTATGATGTGCGAAATTGGTTGCAGCCG
CCTGCTGGTGGGTTCTCAAAGTTGAATGCTTGA
Gene >Pro_DTO377G3_2|g1336.t1
ATGGCTGGACTTACCGAAACTCAGGTCGCCTCCTTCAAGGAGAACGGGTACCTCGTCCTCCCCAACTACCTCGCC
CCAACCGAAGTCACCGCTCTCCTCGCCGAGACAAACAAACTCCTTGAGGAATTCCCACTAGAATCCCACCCCCTC
ACCCAGTTCACAACGGGCGACGAAACCGCCGACCATGTCGGCGACGACTACTTCCTAAACTCGGGCGACAAAATC
CGCTTCTTTTTCGAGCCCGACGCGTTCAGCACCGAGCCGGATCCAGTGACCGGTCGCGCCGCGCTCCTGAAGCCC
AAAAACCGCGCCGTCAACAAGATCGGTCACTCGCTGCATACCCTATCGCCTCCTTTCAAGGCCATCTCGCTCAAC
GAGCGGAACGCTGCTGTCGCGCGGTCCCTGGGATTCGTCGATCCACGCGTGCTGCAGAGTATGGTTATCTGCAAG
CAGCCCTCGATTGGTGGGGCCGTGCCATCCCATCGCGATTCGGAGTTTTTGTATACGGATCCACCCTCTGCTGTG
GGTTGGTGGTATGCGCTGCAGGATGCGGGACCGGCGAATGGGACGTTGGGTATGTACAAGGGGTCGCATACGGGA
AGGAAGGGTGGTCATATTGCTAGGAGGTTTGTGAGGAGGGAGAATGGGGCGGGGACGGAGTTTATTGAGAATCGG
GGGCCTGCGCTCCCCAAAGGCATGGAGGAGGAGAAGAGTGAGGAGGCTACAGATGAGGATTTGGAGATTCTTGAT
ATCAAGGCTGGATCGCTTGTGCTCATTCATGGGAATGTTTTGCATAAGAGTGAGAAGAATACCAGCCTCAATAGT
CGGTATGCTTATACCTTCCATGTTATTGAGGGTGCCGATGGGTGGGAGTATGATGTGCGAAATTGGTTGCAGCCG
CCTGCTGGTGGGTTCTCAAAGTTGAATGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail