Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1316.t1
Gene name
Locationscaffold_01:3453442..3454180
Strand+
Gene length (bp)738
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 5.6E-05 183 207

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1316.t1
MTHASSNDHLESFPVENYGVPHSIAYAQNTPQGTLHYLEQDLPFQSSVYGLPWALNDFDLNMPITSAQANIESLT
GSVRDNASPFGAENTTNSAWMDCDSSALDGYQQGLFSLPAGEPLNETPCEGSPTDDRTSRRRRSKPNAKSSTGPV
TCGWEGCTYTLPFTHVISLWRHIKDKHIFPDAFKCPSPQCGKAYGRKDKLQRHLRSHADAEGRGKCRSCHT*
Coding >Pro_DTO377G3_2|g1316.t1
ATGACACACGCTTCTTCCAACGACCATCTCGAATCTTTCCCTGTTGAGAATTATGGTGTACCTCACAGTATAGCC
TATGCTCAAAATACACCCCAAGGCACACTTCACTATCTCGAACAGGACCTCCCATTTCAAAGTTCTGTCTATGGT
CTTCCATGGGCCTTGAATGACTTCGACCTAAACATGCCAATTACATCGGCACAAGCCAACATCGAGTCTCTTACT
GGATCTGTTAGAGACAACGCCTCCCCATTCGGAGCAGAGAACACAACGAATAGTGCCTGGATGGACTGTGACAGC
TCTGCTTTGGATGGCTATCAGCAGGGGCTCTTTTCGCTCCCAGCGGGAGAACCATTGAATGAGACACCCTGTGAG
GGCAGTCCGACTGATGACCGAACGTCTCGTAGGCGTCGCTCTAAACCCAACGCCAAGAGCAGCACTGGTCCTGTC
ACATGTGGTTGGGAAGGTTGCACATACACACTCCCGTTCACTCATGTGATATCGTTGTGGCGGCATATCAAGGAC
AAGCACATATTCCCTGATGCGTTCAAGTGTCCCTCTCCACAATGTGGAAAGGCATATGGTCGAAAGGACAAGTTG
CAGCGGCATTTGCGATCGCATGCAGACGCGGAAGGTAGAGGTAAATGTCGTTCGTGCCATACATGA
Transcript >Pro_DTO377G3_2|g1316.t1
ATGACACACGCTTCTTCCAACGACCATCTCGAATCTTTCCCTGTTGAGAATTATGGTGTACCTCACAGTATAGCC
TATGCTCAAAATACACCCCAAGGCACACTTCACTATCTCGAACAGGACCTCCCATTTCAAAGTTCTGTCTATGGT
CTTCCATGGGCCTTGAATGACTTCGACCTAAACATGCCAATTACATCGGCACAAGCCAACATCGAGTCTCTTACT
GGATCTGTTAGAGACAACGCCTCCCCATTCGGAGCAGAGAACACAACGAATAGTGCCTGGATGGACTGTGACAGC
TCTGCTTTGGATGGCTATCAGCAGGGGCTCTTTTCGCTCCCAGCGGGAGAACCATTGAATGAGACACCCTGTGAG
GGCAGTCCGACTGATGACCGAACGTCTCGTAGGCGTCGCTCTAAACCCAACGCCAAGAGCAGCACTGGTCCTGTC
ACATGTGGTTGGGAAGGTTGCACATACACACTCCCGTTCACTCATGTGATATCGTTGTGGCGGCATATCAAGGAC
AAGCACATATTCCCTGATGCGTTCAAGTGTCCCTCTCCACAATGTGGAAAGGCATATGGTCGAAAGGACAAGTTG
CAGCGGCATTTGCGATCGCATGCAGACGCGGAAGGTAGAGGTAAATGTCGTTCGTGCCATACATGA
Gene >Pro_DTO377G3_2|g1316.t1
ATGACACACGCTTCTTCCAACGACCATCTCGAATCTTTCCCTGTTGAGAATTATGGTGTACCTCACAGTATAGCC
TATGCTCAAAATACACCCCAAGGCACACTTCACTATCTCGAACAGGACCTCCCATTTCAAAGTTCTGTCTATGGT
CTTCCATGGGCCTTGAATGACTTCGACCTAAACATGCCAATTACATCGGCACAAGCCAACATCGAGTCTCTTACT
GGATCTGTTAGAGACAACGCCTCCCCATTCGGAGCAGAGAACACAACGAATAGTGCCTGGATGGACTGTGACAGC
TCTGCTTTGGATGGCTATCAGCAGGGGCTCTTTTCGCTCCCAGCGGGAGAACCATTGAATGAGACACCCTGTGAG
GGCAGTCCGACTGATGACCGAACGTCTCGTAGGCGTCGCTCTAAACCCAACGCCAAGTGAGTTCTTCCGATACAG
ATCTCTACCCCTATCCCATATCTGTGTTTATCTAATCAATCAATCTTCCAAAGGAGCAGCACTGGTCCTGTCACA
TGTGGTTGGGAAGGTTGCACATACACACTCCCGTTCACTCATGTGATATCGTTGTGGCGGCATATCAAGGACAAG
CACATATTCCCTGATGCGTTCAAGTGTCCCTCTCCACAATGTGGAAAGGCATATGGTCGAAAGGACAAGTTGCAG
CGGCATTTGCGATCGCATGCAGACGCGGAAGGTAGAGGTAAATGTCGTTCGTGCCATACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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