Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1306.t1
Gene name
Locationscaffold_01:3434306..3435101
Strand+
Gene length (bp)795
Transcript length (bp)582
Coding sequence length (bp)582
Protein length (aa) 194

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02580 Tyr_Deacylase D-Tyr-tRNA(Tyr) deacylase 1.7E-52 2 144

GO

GO Term Description Terminal node
GO:0051499 D-aminoacyl-tRNA deacylase activity Yes
GO:0002161 aminoacyl-tRNA editing activity Yes
GO:0005737 cytoplasm Yes
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0140098 catalytic activity, acting on RNA No
GO:0044424 intracellular part No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0003824 catalytic activity No
GO:0005575 cellular_component No
GO:0044464 cell part No
GO:0052689 carboxylic ester hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1306.t1
MKVIIQRVKSASVTVDSELVSSIGKGLLVFAGVGKEDTEKEAENIVKKILKAKFWPDENGVQWKKNVQEIEGEVL
CVSQFTLYAKMKKGNKPDFHDAAGPEAARRIYDFFYDKMREGYTPDRVKNGVFQAMMEVELKNDGPVGVNYCSED
AAVTIEINTNLPKKEPKEQKNDDKDKQDIKGSFEFQIPPELLQ*
Coding >Pro_DTO377G3_2|g1306.t1
ATGAAAGTCATCATCCAAAGAGTCAAATCGGCATCCGTGACAGTCGATTCGGAGCTAGTCTCCTCTATTGGCAAG
GGCCTTCTTGTATTTGCTGGCGTTGGCAAAGAGGATACCGAGAAGGAAGCAGAGAATATCGTGAAAAAGATACTG
AAGGCCAAGTTCTGGCCCGATGAGAATGGGGTACAATGGAAAAAGAATGTTCAGGAGATTGAGGGAGAAGTACTA
TGTGTCTCCCAATTCACCCTCTATGCAAAAATGAAGAAAGGCAACAAACCCGACTTTCATGATGCAGCTGGCCCT
GAAGCTGCACGCAGAATCTATGACTTCTTTTATGACAAGATGCGGGAAGGTTATACTCCAGACCGGGTCAAAAAT
GGTGTCTTCCAAGCCATGATGGAGGTCGAATTGAAGAACGACGGGCCGGTGGGTGTGAACTACTGCAGCGAGGAC
GCGGCGGTCACAATCGAAATCAATACCAATCTTCCCAAAAAGGAACCCAAGGAGCAGAAAAATGACGACAAGGAT
AAACAGGACATCAAGGGATCTTTTGAATTCCAAATTCCCCCAGAATTGCTGCAGTGA
Transcript >Pro_DTO377G3_2|g1306.t1
ATGAAAGTCATCATCCAAAGAGTCAAATCGGCATCCGTGACAGTCGATTCGGAGCTAGTCTCCTCTATTGGCAAG
GGCCTTCTTGTATTTGCTGGCGTTGGCAAAGAGGATACCGAGAAGGAAGCAGAGAATATCGTGAAAAAGATACTG
AAGGCCAAGTTCTGGCCCGATGAGAATGGGGTACAATGGAAAAAGAATGTTCAGGAGATTGAGGGAGAAGTACTA
TGTGTCTCCCAATTCACCCTCTATGCAAAAATGAAGAAAGGCAACAAACCCGACTTTCATGATGCAGCTGGCCCT
GAAGCTGCACGCAGAATCTATGACTTCTTTTATGACAAGATGCGGGAAGGTTATACTCCAGACCGGGTCAAAAAT
GGTGTCTTCCAAGCCATGATGGAGGTCGAATTGAAGAACGACGGGCCGGTGGGTGTGAACTACTGCAGCGAGGAC
GCGGCGGTCACAATCGAAATCAATACCAATCTTCCCAAAAAGGAACCCAAGGAGCAGAAAAATGACGACAAGGAT
AAACAGGACATCAAGGGATCTTTTGAATTCCAAATTCCCCCAGAATTGCTGCAGTGA
Gene >Pro_DTO377G3_2|g1306.t1
ATGAAAGGTGAGGATCTCTGTACCTATACTATATACAAATCAACTCACCCCGTTCAGTCATCATCCAAAGAGTCA
AATCGGCATCCGTGACAGTCGATTCGGAGCTAGTCTCCTCTATTGGCAAGGGCCTTCTTGTATTTGCTGGCGTTG
GCAAAGAGGATACCGAGAAGGAAGCAGAGAATATCGTGAAAAAGATACTGAAGGCCAAGTTCTGGCCCGATGAGA
ATGGGGTACAAGTAAGTCAATGGCTATCAGGTGTGAGACCGGCAATTGACATATCACAGTGGAAAAAGAATGTTC
AGGAGATTGAGGGAGAAGTACTATGTGGTATGGCTCTTCATCTTACTCTCCAGACCACTGCTGAACATGACTAGT
CTCCCAATTCACCCTCTATGCAAAAATGAAGAAAGGCAACAAACCCGACTTTCATGATGCAGCTGGCCCTGAAGC
TGCACGCAGAATCTATGACTTCTTTTATGACAAGATGCGGGAAGGTTATACTCCAGACCGGGTCAAAAATGGTGT
CTTCCAAGCCATGATGGAGGTCGAATTGAAGAACGACGGGCCGGTGGGTGTGAACTACTGCAGCGAGGACGCGGC
GGTACATTTTGACCTTCCAGTTCCTTTCCTCGCCTTCATTGATTATATACTGACTTGGTTTCATTCTAGGTCACA
ATCGAAATCAATACCAATCTTCCCAAAAAGGAACCCAAGGAGCAGAAAAATGACGACAAGGATAAACAGGACATC
AAGGGATCTTTTGAATTCCAAATTCCCCCAGAATTGCTGCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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