Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1262.t1
Gene name
Locationscaffold_01:3317746..3318830
Strand+
Gene length (bp)1084
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 1.1E-07 29 69
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.6E-05 29 68

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1262.t1
MDDVDLRQEILQQTLKEVAGEEKEAANPCVICLDTITEPCVAQPCHHVNFDFLCLVSWIEQQPKCPLCKAELTAV
QYELNATQGPKLYKVPSPSATFPTVPVTSRSRPGNRYGPRGGRRPPPPPRPQSDDPLERRRNVYRNRTYSMRVGS
NRLSQYRELTPDLFARDEELVSRARKWIRRELRVFSFLNPEPEHEERISHQVSRPGPQRLENRRANNAEFLLEYV
IAILRTVDLKGSAGQAEELLRDFIGRENACLFLHELQAWLRSPYNSLEDWDRHVQYSNTPRSVSDGGNRDGRSGH
RPTPVNNRSRPQRSRRPYRSRSQDAIDRSRRLQQAQQRYNPY*
Coding >Pro_DTO377G3_2|g1262.t1
ATGGATGATGTCGATTTGCGACAGGAAATCCTCCAGCAGACTCTTAAAGAGGTAGCTGGTGAGGAGAAAGAGGCG
GCAAATCCTTGTGTTATTTGCCTAGACACTATCACCGAGCCCTGTGTGGCACAGCCATGCCACCATGTCAACTTC
GACTTCCTCTGCCTTGTTAGTTGGATCGAACAGCAACCTAAATGCCCCCTATGTAAAGCCGAGTTGACAGCGGTG
CAATACGAACTCAACGCCACACAAGGTCCGAAGCTATACAAGGTCCCGTCTCCGAGCGCAACATTCCCGACAGTT
CCAGTTACTAGTCGATCACGTCCTGGCAATCGCTACGGCCCACGGGGAGGGCGACGTCCTCCACCCCCGCCGCGA
CCACAGTCAGATGACCCGCTCGAGCGCCGGCGCAATGTCTATCGCAACCGAACATACTCCATGCGAGTCGGGTCC
AATCGGTTATCTCAGTATCGAGAATTGACACCAGACCTCTTCGCTCGTGACGAGGAGCTCGTCTCGCGTGCTCGG
AAATGGATTCGCCGCGAACTACGAGTCTTCTCCTTCCTGAATCCGGAACCGGAGCATGAAGAGCGGATATCTCAC
CAAGTTTCGCGTCCTGGACCTCAGCGGCTGGAGAATCGCAGGGCGAATAATGCCGAGTTCCTGCTGGAATATGTC
ATCGCTATCTTGCGCACGGTCGATCTCAAAGGCAGTGCTGGACAAGCGGAGGAGCTGTTGCGTGATTTCATCGGC
CGCGAGAATGCATGTCTGTTCCTCCACGAATTGCAGGCGTGGCTGAGAAGTCCATATAATTCCTTGGAGGACTGG
GATCGTCATGTTCAGTACTCGAATACTCCGCGAAGTGTGTCTGACGGAGGAAATAGGGATGGTCGCTCGGGTCAT
AGACCGACTCCTGTGAACAATCGGAGTAGACCACAGAGGTCCCGAAGACCATATAGGTCCAGGTCTCAAGATGCG
ATTGATCGCTCCAGGCGGCTGCAGCAAGCTCAACAGCGATATAATCCATATTAG
Transcript >Pro_DTO377G3_2|g1262.t1
ATGGATGATGTCGATTTGCGACAGGAAATCCTCCAGCAGACTCTTAAAGAGGTAGCTGGTGAGGAGAAAGAGGCG
GCAAATCCTTGTGTTATTTGCCTAGACACTATCACCGAGCCCTGTGTGGCACAGCCATGCCACCATGTCAACTTC
GACTTCCTCTGCCTTGTTAGTTGGATCGAACAGCAACCTAAATGCCCCCTATGTAAAGCCGAGTTGACAGCGGTG
CAATACGAACTCAACGCCACACAAGGTCCGAAGCTATACAAGGTCCCGTCTCCGAGCGCAACATTCCCGACAGTT
CCAGTTACTAGTCGATCACGTCCTGGCAATCGCTACGGCCCACGGGGAGGGCGACGTCCTCCACCCCCGCCGCGA
CCACAGTCAGATGACCCGCTCGAGCGCCGGCGCAATGTCTATCGCAACCGAACATACTCCATGCGAGTCGGGTCC
AATCGGTTATCTCAGTATCGAGAATTGACACCAGACCTCTTCGCTCGTGACGAGGAGCTCGTCTCGCGTGCTCGG
AAATGGATTCGCCGCGAACTACGAGTCTTCTCCTTCCTGAATCCGGAACCGGAGCATGAAGAGCGGATATCTCAC
CAAGTTTCGCGTCCTGGACCTCAGCGGCTGGAGAATCGCAGGGCGAATAATGCCGAGTTCCTGCTGGAATATGTC
ATCGCTATCTTGCGCACGGTCGATCTCAAAGGCAGTGCTGGACAAGCGGAGGAGCTGTTGCGTGATTTCATCGGC
CGCGAGAATGCATGTCTGTTCCTCCACGAATTGCAGGCGTGGCTGAGAAGTCCATATAATTCCTTGGAGGACTGG
GATCGTCATGTTCAGTACTCGAATACTCCGCGAAGTGTGTCTGACGGAGGAAATAGGGATGGTCGCTCGGGTCAT
AGACCGACTCCTGTGAACAATCGGAGTAGACCACAGAGGTCCCGAAGACCATATAGGTCCAGGTCTCAAGATGCG
ATTGATCGCTCCAGGCGGCTGCAGCAAGCTCAACAGCGATATAATCCATATTAG
Gene >Pro_DTO377G3_2|g1262.t1
ATGGATGATGTCGATTTGCGACAGGAAATCCTCCAGCAGACTCTTAAAGAGGTAGCTGGTGAGGAGAAAGAGGCG
GCAAATCCTTGTGTTATTTGCCTAGACACTATCACCGAGCCCTGTGTGGCACAGCCATGCCACCATGTCAACTTC
GACTTCCTCTGCCTTGTTAGTTGGATCGAACAGCAACCTAAATGCCCCCTATGTAAGAAACCAGTGGGCAAAATA
CCGCTGACTAGACCTGACTGACAATCCAACAGGTAAAGCCGAGTTGACAGCGGTGCAATACGAACTCAACGCCAC
ACAAGGTCCGAAGCTATACAAGGTCCCGTCTCCGAGCGCAACATTCCCGACAGTTCCAGTTACTAGTCGATCACG
TCCTGGCAATCGCTACGGCCCACGGGGAGGGCGACGTCCTCCACCCCCGCCGCGACCACAGTCAGATGACCCGCT
CGAGCGCCGGCGCAATGTCTATCGCAACCGAACATACTCCATGCGAGTCGGGTCCAATCGGTTATCTCAGTATCG
AGAATTGACACCAGACCTCTTCGCTCGTGACGAGGAGCTCGTCTCGCGTGCTCGGAAATGGATTCGCCGCGAACT
ACGAGTCTTCTCCTTCCTGAATCCGGAACCGGAGCATGAAGAGCGGATATCTCACCAAGTTTCGCGTCCTGGACC
TCAGCGGCTGGAGAATCGCAGGGCGAATAATGCCGAGTTCCTGCTGGAATATGTCATCGCTATCTTGCGCACGGT
CGATCTCAAAGGCAGTGCTGGACAAGCGGAGGAGCTGTTGCGTGATTTCATCGGCCGCGAGAATGCATGTCTGTT
CCTCCACGAATTGCAGGCGTGGCTGAGAAGTCCATATAATTCCTTGGAGGACTGGGATCGTCATGTTCAGTACTC
GAATACTCCGCGAAGTGTGTCTGACGGAGGAAATAGGGATGGTCGCTCGGGTCATAGACCGACTCCTGTGAACAA
TCGGAGTAGACCACAGAGGTCCCGAAGACCATATAGGTCCAGGTCTCAAGATGCGATTGATCGCTCCAGGCGGCT
GCAGCAAGCTCAACAGCGATATAATCCATATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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