Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1261.t1
Gene name
Locationscaffold_01:3315591..3317556
Strand-
Gene length (bp)1965
Transcript length (bp)1728
Coding sequence length (bp)1728
Protein length (aa) 576

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10307 HAD_SAK_1 HAD domain family 1 in Swiss Army Knife RNA repair proteins 2.0E-77 69 273

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1261.t1
MRSAKAVVSENLARFGSAANMSYSTGSGINRPHTITSLRRWSIVNKELPAVSQIRAIHVYDFDNTLFLSPLPNPQ
LWHGSSVGFLQTNDSFATGGWWHDPNILAATGKGMEIEEPRKWEGWWNEQILSLVRNSMEQKDALTVLLTGRSEA
GFSDIIKRMVASQNLEFDLIGLKPEVGPHGQRFATTMNFKQNFLEDLVFTYEQAAEIRVYEDRVRHVKGFRDFFE
CLNRDLQNGPSTARMPILAEVIQVTEGSTYLDPVTEASEVQRMVNSHNLTLRNPALNVTKSRSGRLYIKRVVFYT
GYLVSPEVSNSMTQKLLAPLLPPGLGESNDLKYMANSILITPRPAPRSILDKVGGLGKKLKWQVTGTGNLDNKIW
AARVAPIPATEPYHTENPLPIVVLAVRKGARLIDAGKIQNWHPIPADKAMTFETVVGEKVVLRVEDSGEYRQGEQ
PLNRSQKRRFQPDDGNVVWPNQNTGSDGPSYGRGNYHSSQRGGGDGRHQYDDSPRGRGAHRGRGRGVGRGRGNNN
RGRGRGRGRGEYYQYRSLDDHSTGHDGQHDSKNGHNGGGGAGRGGYSMDY*
Coding >Pro_DTO377G3_2|g1261.t1
ATGCGATCTGCCAAAGCAGTCGTTTCAGAGAACCTTGCACGATTTGGCTCTGCTGCCAATATGTCGTACAGCACT
GGAAGCGGGATTAATCGCCCGCATACGATCACCTCGCTACGACGCTGGTCTATTGTGAACAAGGAGCTGCCAGCT
GTTTCTCAAATTCGCGCAATTCACGTCTACGATTTCGACAACACCTTATTTCTAAGTCCTCTACCAAACCCACAA
TTATGGCATGGCTCCTCAGTCGGCTTCCTTCAAACCAATGATAGTTTCGCAACTGGAGGATGGTGGCACGACCCC
AACATTCTCGCCGCTACAGGAAAAGGCATGGAGATAGAAGAGCCCCGCAAATGGGAAGGCTGGTGGAATGAGCAA
ATTCTTAGTTTGGTTAGGAATAGCATGGAGCAGAAAGATGCGCTCACGGTGTTGCTGACCGGTCGAAGTGAGGCC
GGCTTCTCAGATATCATCAAGCGGATGGTCGCTAGTCAAAATCTTGAATTCGACCTAATTGGTCTCAAACCCGAA
GTTGGTCCACATGGTCAACGGTTTGCGACCACAATGAACTTCAAACAAAACTTTCTCGAGGATCTTGTTTTCACT
TACGAGCAGGCTGCGGAAATCCGCGTCTACGAGGACCGTGTCAGACATGTGAAAGGCTTCCGAGACTTCTTTGAG
TGTCTGAACAGAGACCTCCAAAATGGACCCTCTACTGCACGGATGCCTATCCTTGCTGAAGTCATCCAGGTAACT
GAGGGCAGCACATACCTTGACCCCGTAACTGAGGCTTCTGAGGTGCAGCGCATGGTCAATTCCCACAACCTCACA
CTGCGGAACCCTGCTTTGAACGTAACCAAAAGCCGCTCTGGGCGGTTGTATATCAAGCGTGTCGTCTTCTACACA
GGTTATCTGGTTTCTCCAGAGGTTTCAAACAGCATGACGCAGAAGTTGCTGGCTCCACTGCTCCCCCCAGGGCTT
GGTGAATCAAATGACCTGAAGTACATGGCTAACAGCATCCTAATCACCCCACGCCCAGCACCTCGTTCAATCCTG
GACAAGGTTGGAGGCCTGGGTAAGAAACTAAAGTGGCAGGTTACCGGAACCGGAAATCTGGACAACAAGATATGG
GCAGCCCGCGTGGCACCTATCCCGGCAACGGAGCCTTATCACACGGAGAACCCACTGCCAATTGTAGTACTGGCT
GTTCGCAAAGGTGCTCGCCTCATCGATGCAGGGAAGATCCAAAACTGGCACCCCATTCCGGCTGACAAAGCCATG
ACCTTTGAGACTGTGGTCGGCGAGAAGGTTGTCCTACGAGTCGAGGACAGCGGAGAGTATCGTCAAGGAGAGCAA
CCCTTGAACAGGAGTCAAAAGAGACGCTTCCAGCCGGACGACGGAAATGTCGTCTGGCCCAATCAAAACACCGGC
TCTGATGGCCCATCTTATGGCCGCGGCAACTATCACTCCTCCCAGCGCGGCGGAGGTGATGGACGTCACCAATAC
GATGATAGTCCGCGAGGAAGAGGAGCTCATCGTGGACGTGGCCGAGGTGTCGGACGCGGGCGCGGTAACAACAAC
CGAGGTCGCGGCCGAGGTCGTGGTCGAGGTGAATACTACCAGTATAGGTCGCTAGATGATCATAGCACTGGACAC
GACGGGCAACACGACAGCAAGAATGGACACAATGGTGGCGGAGGTGCAGGCAGAGGGGGTTACTCCATGGACTAT
TGA
Transcript >Pro_DTO377G3_2|g1261.t1
ATGCGATCTGCCAAAGCAGTCGTTTCAGAGAACCTTGCACGATTTGGCTCTGCTGCCAATATGTCGTACAGCACT
GGAAGCGGGATTAATCGCCCGCATACGATCACCTCGCTACGACGCTGGTCTATTGTGAACAAGGAGCTGCCAGCT
GTTTCTCAAATTCGCGCAATTCACGTCTACGATTTCGACAACACCTTATTTCTAAGTCCTCTACCAAACCCACAA
TTATGGCATGGCTCCTCAGTCGGCTTCCTTCAAACCAATGATAGTTTCGCAACTGGAGGATGGTGGCACGACCCC
AACATTCTCGCCGCTACAGGAAAAGGCATGGAGATAGAAGAGCCCCGCAAATGGGAAGGCTGGTGGAATGAGCAA
ATTCTTAGTTTGGTTAGGAATAGCATGGAGCAGAAAGATGCGCTCACGGTGTTGCTGACCGGTCGAAGTGAGGCC
GGCTTCTCAGATATCATCAAGCGGATGGTCGCTAGTCAAAATCTTGAATTCGACCTAATTGGTCTCAAACCCGAA
GTTGGTCCACATGGTCAACGGTTTGCGACCACAATGAACTTCAAACAAAACTTTCTCGAGGATCTTGTTTTCACT
TACGAGCAGGCTGCGGAAATCCGCGTCTACGAGGACCGTGTCAGACATGTGAAAGGCTTCCGAGACTTCTTTGAG
TGTCTGAACAGAGACCTCCAAAATGGACCCTCTACTGCACGGATGCCTATCCTTGCTGAAGTCATCCAGGTAACT
GAGGGCAGCACATACCTTGACCCCGTAACTGAGGCTTCTGAGGTGCAGCGCATGGTCAATTCCCACAACCTCACA
CTGCGGAACCCTGCTTTGAACGTAACCAAAAGCCGCTCTGGGCGGTTGTATATCAAGCGTGTCGTCTTCTACACA
GGTTATCTGGTTTCTCCAGAGGTTTCAAACAGCATGACGCAGAAGTTGCTGGCTCCACTGCTCCCCCCAGGGCTT
GGTGAATCAAATGACCTGAAGTACATGGCTAACAGCATCCTAATCACCCCACGCCCAGCACCTCGTTCAATCCTG
GACAAGGTTGGAGGCCTGGGTAAGAAACTAAAGTGGCAGGTTACCGGAACCGGAAATCTGGACAACAAGATATGG
GCAGCCCGCGTGGCACCTATCCCGGCAACGGAGCCTTATCACACGGAGAACCCACTGCCAATTGTAGTACTGGCT
GTTCGCAAAGGTGCTCGCCTCATCGATGCAGGGAAGATCCAAAACTGGCACCCCATTCCGGCTGACAAAGCCATG
ACCTTTGAGACTGTGGTCGGCGAGAAGGTTGTCCTACGAGTCGAGGACAGCGGAGAGTATCGTCAAGGAGAGCAA
CCCTTGAACAGGAGTCAAAAGAGACGCTTCCAGCCGGACGACGGAAATGTCGTCTGGCCCAATCAAAACACCGGC
TCTGATGGCCCATCTTATGGCCGCGGCAACTATCACTCCTCCCAGCGCGGCGGAGGTGATGGACGTCACCAATAC
GATGATAGTCCGCGAGGAAGAGGAGCTCATCGTGGACGTGGCCGAGGTGTCGGACGCGGGCGCGGTAACAACAAC
CGAGGTCGCGGCCGAGGTCGTGGTCGAGGTGAATACTACCAGTATAGGTCGCTAGATGATCATAGCACTGGACAC
GACGGGCAACACGACAGCAAGAATGGACACAATGGTGGCGGAGGTGCAGGCAGAGGGGGTTACTCCATGGACTAT
TGA
Gene >Pro_DTO377G3_2|g1261.t1
ATGCGATCTGCCAAAGCAGTCGTTTCAGAGAACCTTGCACGATTTGGCTCTGCTGCCAATATGTCGTACAGCACT
GGAAGCGGGATTAATCGCCCGCATACGATCACCTCGCTACGACGCTGGTCTATTGTGAACAAGGAGCTGCCAGGT
TCGATCTCACTATGGTCCACTCTCCTGTTATAATTCTAACGGCTTTCATATTTTCCAGCTGTTTCTCAAATTCGC
GCAATTCACGTCTACGATTTCGACAACACCTGTGAGCATATGCAAAGCTTAGGATGGTCTGACACTCGATTCTAA
CATTCGCACTTTCAGTATTTCTAAGTCCTCTACCAAACCCACAATTATGGCATGGCTCCTCAGTCGGCTTCCTTC
AAACCAATGATAGTTTCGCAACTGGAGGATGGTGGCACGACCCCAACATTCTCGCCGCTACAGGAAAAGGCATGG
AGATAGAAGAGCCCCGCAAATGGGAAGGCTGGTGGAATGAGCAAATTGTGTGCCTTCTATCACATATTACATGTT
GCGGGTGTTTTGAACTGACTTTTTAAAGCTTAGTTTGGTTAGGAATAGCATGGAGCAGAAAGATGCGCTCACGGT
GTTGCTGACCGGTCGAAGTGAGGCCGGCTTCTCAGATATCATCAAGCGGATGGTCGCTAGTCAAAATCTTGAATT
CGACCTAATTGGTCTCAAACCCGAAGTTGGTCCACATGGTCAACGGTTTGCGACCACAATGAACTTCAAACAAAA
CTTTCTCGAGGATCTTGTTTTCACTTACGAGCAGGCTGCGGAAATCCGCGTCTACGAGGACCGTGTCAGACAGTA
AGTCCTGTGGCAACCGAGTTGGAGAATCCGAGCATATCAATGTATTAACCTTCTGCTAGTGTGAAAGGCTTCCGA
GACTTCTTTGAGTGTCTGAACAGAGACCTCCAAAATGGACCCTCTACTGCACGGATGCCTATCCTTGCTGAAGTC
ATCCAGGTAACTGAGGGCAGCACATACCTTGACCCCGTAACTGAGGCTTCTGAGGTGCAGCGCATGGTCAATTCC
CACAACCTCACACTGCGGAACCCTGCTTTGAACGTAACCAAAAGCCGCTCTGGGCGGTTGTATATCAAGCGTGTC
GTCTTCTACACAGGTTATCTGGTTTCTCCAGAGGTTTCAAACAGCATGACGCAGAAGTTGCTGGCTCCACTGCTC
CCCCCAGGGCTTGGTGAATCAAATGACCTGAAGTACATGGCTAACAGCATCCTAATCACCCCACGCCCAGCACCT
CGTTCAATCCTGGACAAGGTTGGAGGCCTGGGTAAGAAACTAAAGTGGCAGGTTACCGGAACCGGAAATCTGGAC
AACAAGATATGGGCAGCCCGCGTGGCACCTATCCCGGCAACGGAGCCTTATCACACGGAGAACCCACTGCCAATT
GTAGTACTGGCTGTTCGCAAAGGTGCTCGCCTCATCGATGCAGGGAAGATCCAAAACTGGCACCCCATTCCGGCT
GACAAAGCCATGACCTTTGAGACTGTGGTCGGCGAGAAGGTTGTCCTACGAGTCGAGGACAGCGGAGAGTATCGT
CAAGGAGAGCAACCCTTGAACAGGAGTCAAAAGAGACGCTTCCAGCCGGACGACGGAAATGTCGTCTGGCCCAAT
CAAAACACCGGCTCTGATGGCCCATCTTATGGCCGCGGCAACTATCACTCCTCCCAGCGCGGCGGAGGTGATGGA
CGTCACCAATACGATGATAGTCCGCGAGGAAGAGGAGCTCATCGTGGACGTGGCCGAGGTGTCGGACGCGGGCGC
GGTAACAACAACCGAGGTCGCGGCCGAGGTCGTGGTCGAGGTGAATACTACCAGTATAGGTCGCTAGATGATCAT
AGCACTGGACACGACGGGCAACACGACAGCAAGAATGGACACAATGGTGGCGGAGGTGCAGGCAGAGGGGGTTAC
TCCATGGACTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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