Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1206.t1
Gene name
Locationscaffold_01:3183840..3185540
Strand+
Gene length (bp)1700
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 1.1E-72 9 399

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1206.t1
MASETKIKVKTPVVELDGDEMTRIIWQDIRNKLILPFLDIDLKYYDLGIEYRDQTNDQVTIDSAEAIKKYGVGVK
CATITPDEARVEEFKLKKMWLSPNGTIRNILGGTVFREPIIIPRVPRLVPGWTKPIIIGRHAFGDQYRAQDRVIP
GPGKLQLVYTPTGGEPEYLQVYDFEGGGVAQCQYNTDDSIAGFAHSSFKMALSKGLPLYMSTKNTILKKYDGRFK
DIFQEIYEKEYKKDFEAKKIWYEHRLIDDMVAQMIKSEGGFVMALKNYDGDVQSDIVAQGFGSLGLMTSTLSTPD
GKAFESEAAHGTVTRHYREHQKGNETSTNPIASIFAWTRGLVQRGELDNTPDVVAFAEELERACIDVVNDEAIMT
KDLALACGRKDREAWVTTSEYMAAVERRLKANLKARL*
Coding >Pro_DTO377G3_2|g1206.t1
ATGGCTTCCGAAACCAAGATTAAGGTCAAGACCCCTGTGGTCGAGTTGGATGGTGATGAGATGACCCGTATTATC
TGGCAAGACATCCGTAACAAGTTGATCCTGCCTTTCCTCGATATCGACCTCAAGTACTACGATTTGGGTATCGAG
TACCGTGATCAGACCAATGATCAGGTCACCATTGACTCCGCCGAGGCTATTAAGAAGTACGGTGTCGGTGTCAAG
TGCGCCACCATCACCCCCGATGAGGCCCGTGTTGAGGAGTTCAAGCTGAAGAAGATGTGGCTCTCCCCCAACGGC
ACTATCCGTAACATTCTTGGCGGTACCGTGTTCCGTGAGCCCATTATCATTCCCCGCGTTCCCCGCCTGGTCCCT
GGCTGGACCAAGCCTATTATTATTGGCCGTCACGCCTTCGGTGACCAGTACCGTGCCCAGGACCGTGTCATCCCC
GGTCCTGGTAAGCTCCAGTTGGTCTACACCCCTACCGGTGGAGAGCCCGAGTACCTCCAGGTCTACGATTTCGAG
GGTGGTGGTGTCGCTCAGTGCCAGTACAACACCGATGATTCCATCGCTGGCTTCGCCCACTCCTCTTTCAAGATG
GCTCTCAGCAAGGGTCTTCCCCTCTACATGAGCACCAAGAACACTATCCTCAAGAAGTACGATGGTCGCTTCAAG
GACATCTTCCAGGAGATCTACGAAAAGGAGTACAAGAAGGACTTCGAGGCCAAGAAGATCTGGTACGAGCACCGT
CTCATTGACGACATGGTCGCCCAGATGATCAAGTCCGAGGGTGGCTTCGTCATGGCTCTTAAGAACTACGACGGT
GATGTCCAGTCCGATATCGTCGCCCAAGGATTCGGCTCTCTCGGTCTGATGACCTCCACTCTGAGCACCCCCGAT
GGTAAGGCCTTCGAGTCCGAGGCCGCCCACGGAACCGTGACCCGTCACTACCGTGAGCACCAGAAGGGTAACGAG
ACCTCCACCAACCCCATTGCCTCCATCTTCGCCTGGACCCGTGGTCTTGTCCAGCGTGGTGAGCTCGACAACACC
CCTGATGTTGTTGCCTTCGCCGAGGAGCTCGAGCGCGCCTGTATTGATGTCGTCAACGACGAGGCTATCATGACT
AAGGATTTGGCTCTCGCCTGTGGCCGCAAGGACCGCGAGGCTTGGGTCACCACCAGCGAGTACATGGCTGCCGTT
GAGCGGAGGCTGAAGGCCAACCTCAAGGCTCGCCTGTAG
Transcript >Pro_DTO377G3_2|g1206.t1
ATGGCTTCCGAAACCAAGATTAAGGTCAAGACCCCTGTGGTCGAGTTGGATGGTGATGAGATGACCCGTATTATC
TGGCAAGACATCCGTAACAAGTTGATCCTGCCTTTCCTCGATATCGACCTCAAGTACTACGATTTGGGTATCGAG
TACCGTGATCAGACCAATGATCAGGTCACCATTGACTCCGCCGAGGCTATTAAGAAGTACGGTGTCGGTGTCAAG
TGCGCCACCATCACCCCCGATGAGGCCCGTGTTGAGGAGTTCAAGCTGAAGAAGATGTGGCTCTCCCCCAACGGC
ACTATCCGTAACATTCTTGGCGGTACCGTGTTCCGTGAGCCCATTATCATTCCCCGCGTTCCCCGCCTGGTCCCT
GGCTGGACCAAGCCTATTATTATTGGCCGTCACGCCTTCGGTGACCAGTACCGTGCCCAGGACCGTGTCATCCCC
GGTCCTGGTAAGCTCCAGTTGGTCTACACCCCTACCGGTGGAGAGCCCGAGTACCTCCAGGTCTACGATTTCGAG
GGTGGTGGTGTCGCTCAGTGCCAGTACAACACCGATGATTCCATCGCTGGCTTCGCCCACTCCTCTTTCAAGATG
GCTCTCAGCAAGGGTCTTCCCCTCTACATGAGCACCAAGAACACTATCCTCAAGAAGTACGATGGTCGCTTCAAG
GACATCTTCCAGGAGATCTACGAAAAGGAGTACAAGAAGGACTTCGAGGCCAAGAAGATCTGGTACGAGCACCGT
CTCATTGACGACATGGTCGCCCAGATGATCAAGTCCGAGGGTGGCTTCGTCATGGCTCTTAAGAACTACGACGGT
GATGTCCAGTCCGATATCGTCGCCCAAGGATTCGGCTCTCTCGGTCTGATGACCTCCACTCTGAGCACCCCCGAT
GGTAAGGCCTTCGAGTCCGAGGCCGCCCACGGAACCGTGACCCGTCACTACCGTGAGCACCAGAAGGGTAACGAG
ACCTCCACCAACCCCATTGCCTCCATCTTCGCCTGGACCCGTGGTCTTGTCCAGCGTGGTGAGCTCGACAACACC
CCTGATGTTGTTGCCTTCGCCGAGGAGCTCGAGCGCGCCTGTATTGATGTCGTCAACGACGAGGCTATCATGACT
AAGGATTTGGCTCTCGCCTGTGGCCGCAAGGACCGCGAGGCTTGGGTCACCACCAGCGAGTACATGGCTGCCGTT
GAGCGGAGGCTGAAGGCCAACCTCAAGGCTCGCCTGTAG
Gene >Pro_DTO377G3_2|g1206.t1
ATGGCTTCCGAAACCAAGATTAAGGTCAAGACCCCTGTGGTCGAGTTGGATGGTGATGAGGTATGGGACAACCCC
CCCTTTTATAGTTCAAGCTTTCGATCAGCTGGCTTCACAAACCCGCGTATTCTCGTGCTTGGCTGCCGCATTTTC
GTCGAAAACGCGGGGAATCACGGGGAATTTTACGATAATTCATGTGTCAAGCCGACGATTATGCCGCCCAAGGCA
TTGAAGCTAGACATTGGCATGTGCTAACCGGACGATCTTCCTCAACATAGATGACCCGTATTATCTGGCAAGACA
TCCGTAACAAGGTAAGCCTATCGTCCCATCCTCGCTCGGGTCAGACCTAGATGATCGCCCACCCCGGTTAGTTCT
CGATACTAATGATCTGCCTATAGTTGATCCTGCCTTTCCTCGATATCGACCTCAAGTACTACGATTTGGGTATCG
AGTACCGTGATCAGACCAATGATCAGGTCACCATTGACTCCGCCGAGGCTATTAAGAAGTACGGTGTCGGTGTCA
AGTGCGCCACCATCACCCCCGATGAGGCCCGTGTTGAGGAGTTCAAGCTGAAGAAGAGTAAGCTCATCAATGGAA
GTTTGTATCGTGTAACACTAAAGCTAACCATCTCTAGTGTGGCTCTCCCCCAACGGCACTATCCGTAACATTCTG
TGAGTAAGCTCAATCTAACTGGCTTTGACCATCACTAATAAGCTATCTAGTGGCGGTACCGTGTTCCGTGAGCCC
ATTATCATTCCCCGCGTTCCCCGCCTGGTCCCTGGCTGGACCAAGCCTATTATTATTGGCCGTCACGCCTTCGGT
GACCAGTACCGTGCCCAGGACCGTGTCATCCCCGGTCCTGGTAAGCTCCAGTTGGTCTACACCCCTACCGGTGGA
GAGCCCGAGTACCTCCAGGTCTACGATTTCGAGGGTGGTGGTGTCGCTCAGTGCCAGTACAACACCGATGATTCC
ATCGCTGGCTTCGCCCACTCCTCTTTCAAGATGGCTCTCAGCAAGGGTCTTCCCCTCTACATGAGCACCAAGAAC
ACTATCCTCAAGAAGTACGATGGTCGCTTCAAGGACATCTTCCAGGAGATCTACGAAAAGGAGTACAAGAAGGAC
TTCGAGGCCAAGAAGATCTGGTACGAGCACCGTCTCATTGACGACATGGTCGCCCAGATGATCAAGTCCGAGGGT
GGCTTCGTCATGGCTCTTAAGAGTAAGTTTTTCCGTCTATCTTGTGTTAGTTTATCTTATCTAACGTATGTTCAG
ACTACGACGGTGATGTCCAGTCCGATATCGTCGCCCAAGGATTCGGCTCTCTCGGTCTGATGACCTCCACTCTGA
GCACCCCCGATGGTAAGGCCTTCGAGTCCGAGGCCGCCCACGGAACCGTGACCCGTCACTACCGTGAGCACCAGA
AGGGTAACGAGACCTCCACCAACCCCATTGCCTCCATCTTCGCCTGGACCCGTGGTCTTGTCCAGCGTGGTGAGC
TCGACAACACCCCTGATGTTGTTGCCTTCGCCGAGGAGCTCGAGCGCGCCTGTATTGATGTCGTCAACGACGAGG
CTATCATGACTAAGGATTTGGCTCTCGCCTGTGGCCGCAAGGACCGCGAGGCTTGGGTCACCACCAGCGAGTACA
TGGCTGCCGTTGAGCGGAGGCTGAAGGCCAACCTCAAGGCTCGCCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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