Protein ID | Pro_DTO377G3_2|g1205.t1 |
Gene name | |
Location | scaffold_01:3179706..3182756 |
Strand | + |
Gene length (bp) | 3050 |
Transcript length (bp) | 2820 |
Coding sequence length (bp) | 2820 |
Protein length (aa) | 940 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01268 | FTHFS | Formate--tetrahydrofolate ligase | 1.6E-251 | 313 | 939 |
PF02882 | THF_DHG_CYH_C | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain | 7.3E-66 | 127 | 289 |
PF00763 | THF_DHG_CYH | Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain | 5.7E-37 | 6 | 122 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055114 | oxidation-reduction process | Yes |
GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | Yes |
GO:0004329 | formate-tetrahydrofolate ligase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0030554 | adenyl nucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0003824 | catalytic activity | No |
GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0016879 | ligase activity, forming carbon-nitrogen bonds | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0016491 | oxidoreductase activity | No |
GO:0008152 | metabolic process | No |
GO:0016874 | ligase activity | No |
GO:0008150 | biological_process | No |
GO:0008144 | drug binding | No |
GO:0003674 | molecular_function | No |
GO:0000166 | nucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | No |
GO:0005488 | binding | No |
GO:0036094 | small molecule binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1205.t1 MAAAKIDGTAIAKSIRQGLKSEIEQIQVTNPRFKPNLVIFQVGNRSDSSTYVRMKLKAAQEANIICTVINVPESS TELELIQEITKANNDPAVHGILVQLPVPSHMSEHAVTSSVADEKDVDGFGAINIGELAKRGGRPLFTPCTPLAVM ELLKASGVDPAGKEAVVLGRSDIVGSPVSYLLKNADATVTVCHSKTPDIARIVKTADIVVAAIGQTELVKGEWLK PGAVVIDVGINYKPDATKKSGERLVGDVDFESASQVASQITPVPGGVGPMTVAMLLKNVVGATKCYFEKQKDRHV TPLPIRILNPVPSDIAISRAQYPKPITQVATEVGIAPHELEPYGHTKAKISLSVLERLSHRRNGRYILVCGITPT PLGEGKSTTTLGLTQALGAHLNRISFANVRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNL LAAAIETRMFHESTQKDAALYKRLVPASKGKREFKPIMFRRLKKLGIEKTNPDDLTEEEITRFARLDIDPETITW RRVLDVNDRHLRGITVGQAPTEKGLSRETGFDISVASECMAILALSNDLADMRERLGRMVVATSRSGDPVTCDDI GAGGALAALMKDAIKPNLMQSLEGTPVMVHAGPFANISIGASSAIADKLALKLAGTEPDEDHEAKTGFVVTEAGF DFTMGGERFFNIKCRSSGLVPDTVVIVATVRALKVHGGGPEIKPGAPLQEVYRTENVDILRKGCVNLRKHIANAK LYGVPVVVAINKFDTDTEAEIAVIKEEAIAAGAEDAVPANHWAEGGAGAVDLAKAVITASSKEKDFRLLYDLDGT IQERIERIGQAMYGAEKVEFSELAQKKVDAYTKQGFANLPICIAKTQYSLSHDPALKGAPTGFTVPIRDVRLAVG AGYLYALAADIQTIPGLPTAPGYLNVDIDPETGDIDGLF* |
Coding | >Pro_DTO377G3_2|g1205.t1 ATGGCTGCCGCGAAGATTGATGGCACTGCCATCGCGAAGAGTATTCGCCAAGGGTTGAAGTCCGAGATCGAGCAG ATTCAAGTGACGAACCCCAGATTCAAGCCAAATCTGGTTATCTTCCAGGTCGGCAATCGGTCGGATTCAAGCACC TATGTGCGCATGAAGCTGAAGGCCGCCCAGGAGGCCAACATCATCTGCACCGTGATCAATGTTCCCGAATCGAGC ACCGAGTTGGAGCTCATCCAAGAGATCACCAAAGCCAACAATGACCCCGCTGTCCACGGTATCCTCGTTCAATTG CCCGTCCCAAGCCACATGTCCGAGCATGCGGTCACGTCGAGTGTTGCAGATGAGAAAGATGTTGATGGTTTCGGC GCAATCAATATCGGCGAGCTGGCGAAGCGAGGCGGTCGCCCGTTGTTCACTCCGTGCACCCCTCTCGCGGTTATG GAACTACTCAAGGCAAGCGGCGTAGACCCCGCCGGTAAGGAGGCAGTGGTACTGGGACGGAGTGACATCGTCGGC AGTCCGGTCAGCTATTTGCTTAAGAACGCCGATGCTACCGTTACTGTCTGCCACTCAAAGACACCGGATATTGCG CGCATTGTCAAGACCGCCGACATTGTTGTAGCGGCCATTGGCCAAACCGAGCTTGTGAAGGGTGAATGGTTGAAG CCCGGTGCTGTAGTTATTGATGTCGGTATCAATTACAAGCCTGATGCGACTAAGAAGTCCGGTGAGCGACTGGTT GGCGACGTGGACTTTGAGTCTGCTTCCCAGGTGGCCTCACAAATCACCCCCGTCCCCGGTGGTGTTGGTCCTATG ACAGTGGCTATGTTGTTGAAGAACGTGGTGGGTGCCACAAAGTGCTACTTCGAGAAACAGAAGGACCGCCACGTC ACTCCTCTTCCCATTCGCATACTAAATCCCGTGCCTTCCGACATTGCTATCTCGCGGGCCCAGTACCCCAAGCCC ATCACCCAGGTTGCCACCGAGGTCGGCATTGCCCCTCATGAGTTGGAGCCCTACGGCCACACCAAGGCCAAGATT AGTCTGAGTGTGCTGGAACGCCTCTCCCATCGCCGCAACGGAAGATACATCTTGGTTTGCGGTATCACACCCACC CCTCTTGGTGAGGGCAAGTCCACTACCACACTAGGTCTCACTCAAGCACTTGGTGCCCACCTGAACCGCATTTCC TTTGCCAACGTCCGACAGCCCAGCCAAGGCCCCACATTCGGCATCAAGGGTGGTGCTGCTGGTGGAGGCTACAGT CAGGTTATTCCTATGGACGAGTTCAATCTCCACCTCACGGGTGACATCCACGCCATCACCGCCGCGAACAACCTT CTCGCTGCGGCTATTGAGACTCGCATGTTCCACGAGTCCACCCAGAAAGATGCAGCTCTCTACAAGCGTCTTGTC CCTGCCAGCAAGGGCAAGCGTGAATTCAAGCCCATCATGTTCCGACGTCTGAAGAAGCTGGGCATTGAGAAGACC AACCCAGACGATCTCACTGAGGAGGAAATCACCCGCTTTGCCCGCCTAGATATCGACCCAGAGACCATCACTTGG CGCCGTGTTCTCGATGTCAATGACCGTCATCTACGTGGTATCACTGTCGGCCAGGCCCCTACCGAGAAGGGCCTG TCTCGTGAGACTGGCTTCGATATCTCCGTCGCTAGTGAGTGCATGGCCATTCTTGCCTTGAGTAACGATTTGGCG GATATGCGTGAGCGACTGGGCCGTATGGTTGTTGCTACTTCTAGAAGCGGCGACCCCGTGACTTGCGACGACATT GGTGCCGGTGGTGCCCTTGCCGCCTTGATGAAGGATGCCATTAAGCCAAATTTGATGCAGAGTTTGGAAGGCACT CCTGTGATGGTGCACGCTGGTCCCTTTGCCAACATCAGTATTGGCGCCAGCTCTGCCATCGCCGATAAGCTTGCC CTGAAGCTTGCCGGTACCGAGCCTGATGAGGACCATGAAGCCAAGACCGGTTTCGTGGTCACCGAGGCTGGCTTC GACTTCACAATGGGTGGTGAGCGCTTCTTTAACATCAAGTGCCGCTCCTCTGGTCTGGTTCCGGACACCGTCGTT ATTGTGGCTACTGTCCGTGCGCTGAAGGTTCACGGCGGCGGCCCCGAGATCAAGCCCGGTGCCCCTCTGCAGGAG GTCTACCGCACCGAGAATGTGGATATTCTCCGCAAGGGTTGTGTTAACCTGCGGAAGCACATTGCTAACGCCAAG CTGTACGGCGTCCCGGTGGTGGTGGCTATCAATAAGTTCGACACCGATACCGAGGCTGAAATTGCTGTCATCAAG GAGGAGGCGATCGCCGCTGGTGCCGAGGATGCCGTCCCTGCCAACCATTGGGCTGAGGGTGGAGCCGGCGCTGTT GATCTGGCCAAGGCTGTCATAACCGCCAGCTCCAAGGAGAAGGACTTCCGGCTCCTCTACGACCTGGATGGTACT ATCCAGGAGCGCATCGAGCGCATCGGCCAGGCCATGTATGGCGCTGAGAAGGTTGAGTTCAGTGAATTGGCTCAG AAGAAGGTCGACGCCTACACCAAGCAAGGATTCGCGAACCTGCCGATCTGTATCGCCAAGACTCAGTACTCACTC AGTCACGACCCAGCCCTCAAGGGTGCCCCCACCGGCTTCACTGTGCCCATTCGGGATGTCAGATTGGCCGTGGGC GCTGGATACCTCTACGCTCTGGCCGCCGATATCCAGACCATTCCCGGACTACCCACTGCCCCCGGCTACCTTAAT GTGGATATCGACCCCGAGACTGGCGATATTGACGGGCTGTTCTAG |
Transcript | >Pro_DTO377G3_2|g1205.t1 ATGGCTGCCGCGAAGATTGATGGCACTGCCATCGCGAAGAGTATTCGCCAAGGGTTGAAGTCCGAGATCGAGCAG ATTCAAGTGACGAACCCCAGATTCAAGCCAAATCTGGTTATCTTCCAGGTCGGCAATCGGTCGGATTCAAGCACC TATGTGCGCATGAAGCTGAAGGCCGCCCAGGAGGCCAACATCATCTGCACCGTGATCAATGTTCCCGAATCGAGC ACCGAGTTGGAGCTCATCCAAGAGATCACCAAAGCCAACAATGACCCCGCTGTCCACGGTATCCTCGTTCAATTG CCCGTCCCAAGCCACATGTCCGAGCATGCGGTCACGTCGAGTGTTGCAGATGAGAAAGATGTTGATGGTTTCGGC GCAATCAATATCGGCGAGCTGGCGAAGCGAGGCGGTCGCCCGTTGTTCACTCCGTGCACCCCTCTCGCGGTTATG GAACTACTCAAGGCAAGCGGCGTAGACCCCGCCGGTAAGGAGGCAGTGGTACTGGGACGGAGTGACATCGTCGGC AGTCCGGTCAGCTATTTGCTTAAGAACGCCGATGCTACCGTTACTGTCTGCCACTCAAAGACACCGGATATTGCG CGCATTGTCAAGACCGCCGACATTGTTGTAGCGGCCATTGGCCAAACCGAGCTTGTGAAGGGTGAATGGTTGAAG CCCGGTGCTGTAGTTATTGATGTCGGTATCAATTACAAGCCTGATGCGACTAAGAAGTCCGGTGAGCGACTGGTT GGCGACGTGGACTTTGAGTCTGCTTCCCAGGTGGCCTCACAAATCACCCCCGTCCCCGGTGGTGTTGGTCCTATG ACAGTGGCTATGTTGTTGAAGAACGTGGTGGGTGCCACAAAGTGCTACTTCGAGAAACAGAAGGACCGCCACGTC ACTCCTCTTCCCATTCGCATACTAAATCCCGTGCCTTCCGACATTGCTATCTCGCGGGCCCAGTACCCCAAGCCC ATCACCCAGGTTGCCACCGAGGTCGGCATTGCCCCTCATGAGTTGGAGCCCTACGGCCACACCAAGGCCAAGATT AGTCTGAGTGTGCTGGAACGCCTCTCCCATCGCCGCAACGGAAGATACATCTTGGTTTGCGGTATCACACCCACC CCTCTTGGTGAGGGCAAGTCCACTACCACACTAGGTCTCACTCAAGCACTTGGTGCCCACCTGAACCGCATTTCC TTTGCCAACGTCCGACAGCCCAGCCAAGGCCCCACATTCGGCATCAAGGGTGGTGCTGCTGGTGGAGGCTACAGT CAGGTTATTCCTATGGACGAGTTCAATCTCCACCTCACGGGTGACATCCACGCCATCACCGCCGCGAACAACCTT CTCGCTGCGGCTATTGAGACTCGCATGTTCCACGAGTCCACCCAGAAAGATGCAGCTCTCTACAAGCGTCTTGTC CCTGCCAGCAAGGGCAAGCGTGAATTCAAGCCCATCATGTTCCGACGTCTGAAGAAGCTGGGCATTGAGAAGACC AACCCAGACGATCTCACTGAGGAGGAAATCACCCGCTTTGCCCGCCTAGATATCGACCCAGAGACCATCACTTGG CGCCGTGTTCTCGATGTCAATGACCGTCATCTACGTGGTATCACTGTCGGCCAGGCCCCTACCGAGAAGGGCCTG TCTCGTGAGACTGGCTTCGATATCTCCGTCGCTAGTGAGTGCATGGCCATTCTTGCCTTGAGTAACGATTTGGCG GATATGCGTGAGCGACTGGGCCGTATGGTTGTTGCTACTTCTAGAAGCGGCGACCCCGTGACTTGCGACGACATT GGTGCCGGTGGTGCCCTTGCCGCCTTGATGAAGGATGCCATTAAGCCAAATTTGATGCAGAGTTTGGAAGGCACT CCTGTGATGGTGCACGCTGGTCCCTTTGCCAACATCAGTATTGGCGCCAGCTCTGCCATCGCCGATAAGCTTGCC CTGAAGCTTGCCGGTACCGAGCCTGATGAGGACCATGAAGCCAAGACCGGTTTCGTGGTCACCGAGGCTGGCTTC GACTTCACAATGGGTGGTGAGCGCTTCTTTAACATCAAGTGCCGCTCCTCTGGTCTGGTTCCGGACACCGTCGTT ATTGTGGCTACTGTCCGTGCGCTGAAGGTTCACGGCGGCGGCCCCGAGATCAAGCCCGGTGCCCCTCTGCAGGAG GTCTACCGCACCGAGAATGTGGATATTCTCCGCAAGGGTTGTGTTAACCTGCGGAAGCACATTGCTAACGCCAAG CTGTACGGCGTCCCGGTGGTGGTGGCTATCAATAAGTTCGACACCGATACCGAGGCTGAAATTGCTGTCATCAAG GAGGAGGCGATCGCCGCTGGTGCCGAGGATGCCGTCCCTGCCAACCATTGGGCTGAGGGTGGAGCCGGCGCTGTT GATCTGGCCAAGGCTGTCATAACCGCCAGCTCCAAGGAGAAGGACTTCCGGCTCCTCTACGACCTGGATGGTACT ATCCAGGAGCGCATCGAGCGCATCGGCCAGGCCATGTATGGCGCTGAGAAGGTTGAGTTCAGTGAATTGGCTCAG AAGAAGGTCGACGCCTACACCAAGCAAGGATTCGCGAACCTGCCGATCTGTATCGCCAAGACTCAGTACTCACTC AGTCACGACCCAGCCCTCAAGGGTGCCCCCACCGGCTTCACTGTGCCCATTCGGGATGTCAGATTGGCCGTGGGC GCTGGATACCTCTACGCTCTGGCCGCCGATATCCAGACCATTCCCGGACTACCCACTGCCCCCGGCTACCTTAAT GTGGATATCGACCCCGAGACTGGCGATATTGACGGGCTGTTCTAG |
Gene | >Pro_DTO377G3_2|g1205.t1 ATGGCTGCCGCGAAGATTGATGGCACTGCCATCGCGAAGAGTATTCGCCAAGGGTTGAAGTCCGAGATCGAGCAG ATTCAAGTGACGAACCCCAGATTCAAGCCAAATCTGGTTATCTTCCAGGGTAAGCGTGACCCGCTCCGAGCATGA ATACATGTAATGTAGTGTTGAATACTAACATGACGATTCTTATCTAGTCGGCAATCGGTCGGATTCAAGTTGGTT TACCTACGAATAGTATTGAAGATCTTGCGGACTAATTTTACTTAGGCACCTATGTGCGCATGAAGCTGAAGGCCG CCCAGGAGGTATGACTCGTTGTTCGGGATATCCGAGGCATTCTCTGACCTTATTCCTAGGCCAACATCATCTGCA CCGTGATCAATGTTCCCGAATCGAGCACCGAGTTGGAGCTCATCCAAGAGATCACCAAAGCCAACAATGACCCCG CTGTCCACGGTATCCTCGTTCAATTGCCCGTCCCAAGCCACATGTCCGAGCATGCGGTCACGTCGAGTGTTGCAG ATGAGAAAGATGTTGATGGTTTCGGCGCAATCAATATCGGCGAGCTGGCGAAGCGAGGCGGTCGCCCGTTGTTCA CTCCGTGCACCCCTCTCGCGGTTATGGAACTACTCAAGGCAAGCGGCGTAGACCCCGCCGGTAAGGAGGCAGTGG TACTGGGACGGAGTGACATCGTCGGCAGTCCGGTCAGCTATTTGCTTAAGAACGCCGATGCTACCGTTACTGTCT GCCACTCAAAGACACCGGATATTGCGCGCATTGTCAAGACCGCCGACATTGTTGTAGCGGCCATTGGCCAAACCG AGCTTGTGAAGGGTGAATGGTTGAAGCCCGGTGCTGTAGTTATTGATGTCGGTATCAATTACAAGCCTGATGCGA CTAAGAAGTCCGGTGAGCGACTGGTTGGCGACGTGGACTTTGAGTCTGCTTCCCAGGTGGCCTCACAAATCACCC CCGTCCCCGGTGGTGTTGGTCCTATGACAGTGGCTATGTTGTTGAAGAACGTGGTGGGTGCCACAAAGTGCTACT TCGAGAAACAGAAGGACCGCCACGTCACTCCTCTTCCCATTCGCATACTAAATCCCGTGCCTTCCGACATTGCTA TCTCGCGGGCCCAGTACCCCAAGCCCATCACCCAGGTTGCCACCGAGGTCGGCATTGCCCCTCATGAGTTGGAGC CCTACGGCCACACCAAGGCCAAGATTAGTCTGAGTGTGCTGGAACGCCTCTCCCATCGCCGCAACGGAAGATACA TCTTGGTTTGCGGTATCACACCCACCCCTCTTGGTGAGGGCAAGTCCACTACCACACTAGGTCTCACTCAAGCAC TTGGTGCCCACCTGAACCGCATTTCCTTTGCCAACGTCCGACAGCCCAGCCAAGGCCCCACATTCGGCATCAAGG GTGGTGCTGCTGGTGGAGGCTACAGTCAGGTTATTCCTATGGACGAGTTCAATCTCCACCTCACGGGTGACATCC ACGCCATCACCGCCGCGAACAACCTTCTCGCTGCGGCTATTGAGACTCGCATGTTCCACGAGTCCACCCAGAAAG ATGCAGCTCTCTACAAGCGTCTTGTCCCTGCCAGCAAGGGCAAGCGTGAATTCAAGCCCATCATGTTCCGACGTC TGAAGAAGCTGGGCATTGAGAAGACCAACCCAGACGATCTCACTGAGGAGGAAATCACCCGCTTTGCCCGCCTAG ATATCGACCCAGAGACCATCACTTGGCGCCGTGTTCTCGATGTCAATGACCGTCATCTACGTGGTATCACTGTCG GCCAGGCCCCTACCGAGAAGGGCCTGTCTCGTGAGACTGGCTTCGATATCTCCGTCGCTAGTGAGTGCATGGCCA TTCTTGCCTTGAGTAACGATTTGGCGGATATGCGTGAGCGACTGGGCCGTATGGTTGTTGCTACTTCTAGAAGCG GCGACCCCGTGACTTGCGACGACATTGGTGCCGGTGGTGCCCTTGCCGCCTTGATGAAGGATGCCATTAAGCCAA ATTTGATGCAGAGTTTGGAAGGCACTCCTGTGATGGTGCACGCTGGTCCCTTTGCCAACATCAGTATTGGCGCCA GCTCTGCCATCGCCGATAAGCTTGCCCTGAAGCTTGCCGGTACCGAGCCTGATGAGGACCATGAAGCCAAGACCG GTTTCGTGGTCACCGAGGCTGGCTTCGACTTCACAATGGGTGGTGAGCGCTTCTTTAACATCAAGTGCCGCTCCT CTGGTCTGGTTCCGGACACCGTCGTTATTGTGGCTACTGTCCGTGCGCTGAAGGTTCACGGCGGCGGCCCCGAGA TCAAGCCCGGTGCCCCTCTGCAGGAGGTCTACCGCACCGAGAATGTGGATATTCTCCGCAAGGGTTGTGTTAACC TGCGGAAGCACATTGCTAACGCCAAGCTGTACGGCGTCCCGGTGGTGGTGGCTATCAATAAGTTCGACACCGATA CCGAGGCTGAAATTGCTGTCATCAAGGAGGAGGCGATCGCCGCTGGTGCCGAGGATGCCGTCCCTGCCAACCATT GGGCTGAGGGTGGAGCCGGCGCTGTTGATCTGGCCAAGGCTGTCATAACCGCCAGCTCCAAGGAGAAGGACTTCC GGCTCCTCTACGACCTGGATGGTACTATCCAGGAGCGCATCGAGCGCATCGGCCAGGCCATGTATGGCGCTGAGA AGGTTGAGTTCAGTGAATTGGCTCAGAAGAAGGTCGACGCCTACACCAAGCAAGGATTCGCGAACCTGCCGATCT GTATCGCCAAGACTCAGTACTCACTCAGTCACGACCCAGCCCTCAAGGGTGCCCCCACCGGCTTCACTGTGCCCA TTCGGGATGTCAGATTGGCCGTGGGCGCTGGATACCTGTAAGTTTTTATCCCCGCATTTTGTGGGAATTCGTCAC GCTAACATAGCTATAGCTACGCTCTGGCCGCCGATATCCAGACCATTCCCGGACTACCCACTGCCCCCGGCTACC TTAATGTGGATATCGACCCCGAGACTGGCGATATTGACGGGCTGTTCTAG |