Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1202.t1
Gene name
Locationscaffold_01:3174062..3174988
Strand+
Gene length (bp)926
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00018 SH3_1 SH3 domain 7.0E-14 130 176
PF14604 SH3_9 Variant SH3 domain 2.0E-08 131 180
PF07653 SH3_2 Variant SH3 domain 1.1E-06 129 182

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1202.t1
MAPTVKFASAMTTRSLRMVRTELEFLADASVITPNQLSTILSQLPADSEVSRALQASPSEQAQPAPVQQVPVQAQ
PPPAPYSNTPSYSAPVSQMSNMSVNEKAALNNQYASPPPQAPPSYLQAPPLRLAVAMYEFKSTDPGDLDLKPHDR
VQITEEINAHWWRGRNERTGQEGIFPGSYVDEKAALASPPPQFTDYGNMPLAVSQSGQPENPEDPKKNKFEEGGK
KFGKKLGNAAIFGAGATVGSNIVNSIF*
Coding >Pro_DTO377G3_2|g1202.t1
ATGGCGCCCACTGTCAAGTTCGCGTCTGCTATGACCACCCGGTCGCTCCGCATGGTCCGGACGGAACTAGAATTC
CTTGCCGATGCCTCTGTGATCACTCCCAACCAGCTCTCAACCATTCTATCACAGTTGCCCGCCGATTCCGAGGTC
TCTCGGGCGTTGCAGGCATCACCATCGGAGCAGGCACAGCCTGCGCCTGTTCAACAAGTTCCAGTACAAGCGCAG
CCACCTCCAGCTCCATACAGCAACACGCCCTCATACTCGGCTCCCGTCTCACAAATGTCCAATATGTCGGTGAAC
GAGAAAGCCGCGCTGAACAATCAATATGCCAGCCCGCCCCCTCAGGCGCCGCCTTCTTATCTCCAAGCCCCGCCG
CTCCGTCTGGCGGTGGCCATGTACGAATTCAAATCTACCGACCCGGGTGACCTGGACCTGAAGCCGCATGATCGT
GTCCAGATTACTGAGGAAATAAACGCGCACTGGTGGCGTGGTCGCAATGAGCGAACTGGTCAGGAGGGTATCTTC
CCTGGAAGTTACGTGGATGAAAAAGCTGCGCTTGCTTCGCCCCCGCCCCAGTTTACAGACTATGGAAACATGCCT
CTTGCGGTCAGCCAGAGTGGACAGCCCGAAAACCCCGAGGACCCAAAGAAGAACAAGTTCGAGGAAGGAGGCAAG
AAGTTCGGAAAGAAACTGGGCAATGCCGCAATCTTCGGTGCCGGTGCTACTGTTGGCTCCAACATCGTGAACAGC
ATCTTCTAA
Transcript >Pro_DTO377G3_2|g1202.t1
ATGGCGCCCACTGTCAAGTTCGCGTCTGCTATGACCACCCGGTCGCTCCGCATGGTCCGGACGGAACTAGAATTC
CTTGCCGATGCCTCTGTGATCACTCCCAACCAGCTCTCAACCATTCTATCACAGTTGCCCGCCGATTCCGAGGTC
TCTCGGGCGTTGCAGGCATCACCATCGGAGCAGGCACAGCCTGCGCCTGTTCAACAAGTTCCAGTACAAGCGCAG
CCACCTCCAGCTCCATACAGCAACACGCCCTCATACTCGGCTCCCGTCTCACAAATGTCCAATATGTCGGTGAAC
GAGAAAGCCGCGCTGAACAATCAATATGCCAGCCCGCCCCCTCAGGCGCCGCCTTCTTATCTCCAAGCCCCGCCG
CTCCGTCTGGCGGTGGCCATGTACGAATTCAAATCTACCGACCCGGGTGACCTGGACCTGAAGCCGCATGATCGT
GTCCAGATTACTGAGGAAATAAACGCGCACTGGTGGCGTGGTCGCAATGAGCGAACTGGTCAGGAGGGTATCTTC
CCTGGAAGTTACGTGGATGAAAAAGCTGCGCTTGCTTCGCCCCCGCCCCAGTTTACAGACTATGGAAACATGCCT
CTTGCGGTCAGCCAGAGTGGACAGCCCGAAAACCCCGAGGACCCAAAGAAGAACAAGTTCGAGGAAGGAGGCAAG
AAGTTCGGAAAGAAACTGGGCAATGCCGCAATCTTCGGTGCCGGTGCTACTGTTGGCTCCAACATCGTGAACAGC
ATCTTCTAA
Gene >Pro_DTO377G3_2|g1202.t1
ATGGCGCCCACTGTCAAGTTCGCGTCTGCTATGACCACCCGGTCGCTCCGCATGGTCCGGACGGTATGGCTTTCC
GGCTTCCTGTTCCTGAAATGCGACCGAAACACTAATTCCACATCATCCAGGAACTAGAATTCCTTGCCGATGCCT
CTGTGATCACTCCCAACCAGCTCTCAACCATTCTATCACAGTTGCCCGCCGATTCCGAGGTCTCTCGGGCGTTGC
AGGCATCACCATCGGAGCAGGCACAGCCTGCGCCTGTTCAACAAGTTCCAGTACAAGCGCAGCCACCTCCAGCTC
CATACAGCAACACGCCCTCATACTCGGCTCCCGTCTCACAAATGTCCAATATGTCGGTGAACGAGAAAGCCGCGC
TGAACAATCAATATGCCAGCCCGCCCCCTCAGGCGCCGCCTTCTTATCTCCAAGCCCCGCCGCTCCGTCTGGCGG
TGGCCATGTACGAATTCAAATCTACCGACCCGGGTGACCTGGACCTGAAGCCGCATGATCGTGTCCAGATTACTG
AGGAAATAAACGCGCACTGTATGTTCTCCTTCTATTGGATATGGAAACAAAGCTGACTAGTGATTAATAGGGTGG
CGTGGTCGCAATGAGCGAACTGGTCAGGAGGGTATCTTCCCTGGAAGTTACGTGGATGAAAAAGCTGCGCTTGCT
TCGCCCCCGCCCCAGTTTACAGACTATGGAAACATGCCTCTTGCGGTCAGCCAGAGTGGACAGCCCGAAAACCCC
GAGGACCCAAAGAAGAACAAGTTCGAGGAAGGAGGCAAGAAGTTCGGAAAGAAACTGGGCAATGCCGGTACGTCT
TATATACTTTTGGTACTCGTTATTTGGTTTCTAACTTGATATTAGCAATCTTCGGTGCCGGTGCTACTGTTGGCT
CCAACATCGTGAACAGCATCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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