© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g120.t1 |
| Gene name | |
| Location | scaffold_01:302128..303700 |
| Strand | - |
| Gene length (bp) | 1572 |
| Transcript length (bp) | 1242 |
| Coding sequence length (bp) | 1242 |
| Protein length (aa) | 414 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00892 | EamA | EamA-like transporter family | 4.4E-07 | 147 | 210 |
| PF13127 | DUF3955 | Protein of unknown function (DUF3955) | 1.9E-06 | 20 | 72 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 53 | 72 | 19 |
| 3 | 141 | 160 | 19 |
| 4 | 164 | 186 | 22 |
| 5 | 198 | 215 | 17 |
| 6 | 238 | 260 | 22 |
| 7 | 273 | 295 | 22 |
| 8 | 310 | 329 | 19 |
| 9 | 336 | 358 | 22 |
| 10 | 363 | 380 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g120.t1 MTLTTHEAPGTMPLGMARRTLGIILLLVVVVLWTTSNFLGSTIFADKTYPNPFFVTYTNTSMFMMPLILIVARRT WALWRHGKLSQITSLRSFLNHLDSHDPKAEEERILRSGSDEEDGQFSRGRQDPSSGKLGLKATAKLSIQFCLLWF TANYFAMGCLQFTSVASTTILTSTSGVWTMVFGALLRVEKFTMRKLMGVLASLIGIILISRVDLSKPETGEGADS GEGSFPHKSSGEIALGDAMAAFSAILYGLYTVVMKKQVGDESRVNMPLFFGLVGFFNIIFLWPGFFIMHWTGLEP FSLPETSRVWSIILTNAFASFVSDIAWAYSMLLTTPLIVTVGLSMTIPLSLIGQMVLQSQYSSPLYWVGAAIVFL SFLVVQHESKPEDDLTTDAGRTFSGEYNSIPVEEEEMR* |
| Coding | >Pro_DTO377G3_2|g120.t1 ATGACCTTGACCACACACGAAGCACCTGGCACGATGCCACTGGGGATGGCGCGGCGAACATTAGGAATCATCCTG CTCCTAGTGGTGGTTGTGCTGTGGACAACCTCGAATTTCCTTGGAAGTACTATCTTCGCCGACAAAACATACCCG AACCCTTTCTTCGTAACTTACACGAATACCTCCATGTTTATGATGCCTCTCATTCTCATCGTCGCTCGTCGAACA TGGGCTCTCTGGCGTCACGGGAAACTTTCTCAGATCACATCATTGAGGAGCTTTTTGAACCATTTGGATTCGCAT GACCCGAAGGCCGAGGAGGAGAGGATACTACGCAGCGGCTCAGATGAAGAGGACGGGCAATTCTCGCGGGGGAGA CAGGATCCTTCAAGCGGAAAGCTAGGGCTTAAAGCGACAGCTAAACTCAGTATTCAGTTTTGTCTGCTCTGGTTT ACTGCAAATTACTTCGCCATGGGATGTCTTCAATTCACGTCAGTTGCAAGCACAACCATTCTGACTTCCACCAGT GGTGTATGGACTATGGTCTTCGGCGCCCTGCTGCGTGTTGAGAAATTCACGATGCGCAAATTAATGGGTGTCTTG GCTTCTCTGATTGGCATTATCCTGATTTCGCGCGTAGATCTCTCCAAGCCAGAAACAGGCGAGGGCGCAGATAGT GGCGAGGGTTCATTCCCACACAAATCCTCAGGGGAGATTGCCCTTGGCGATGCCATGGCAGCGTTCAGTGCCATC TTGTACGGTCTTTATACCGTCGTGATGAAGAAACAAGTTGGCGACGAATCCCGGGTAAACATGCCACTCTTCTTC GGCCTGGTTGGATTTTTCAACATCATCTTTCTGTGGCCTGGTTTCTTCATCATGCACTGGACGGGGCTTGAGCCC TTCTCCTTACCCGAGACGTCGCGAGTGTGGTCAATCATTCTGACCAACGCGTTTGCATCATTTGTCTCCGACATT GCTTGGGCTTACTCCATGCTCCTCACCACCCCGCTTATCGTGACAGTCGGGCTTAGTATGACCATCCCGCTCTCC CTGATTGGACAGATGGTCCTACAGTCACAATACTCCAGCCCTCTGTACTGGGTTGGAGCCGCTATTGTGTTCTTG TCATTCTTGGTTGTGCAACACGAGAGTAAGCCTGAGGACGACCTCACCACTGATGCAGGCAGGACCTTCTCGGGT GAGTATAACAGTATTCCCGTTGAAGAAGAGGAAATGCGTTAG |
| Transcript | >Pro_DTO377G3_2|g120.t1 ATGACCTTGACCACACACGAAGCACCTGGCACGATGCCACTGGGGATGGCGCGGCGAACATTAGGAATCATCCTG CTCCTAGTGGTGGTTGTGCTGTGGACAACCTCGAATTTCCTTGGAAGTACTATCTTCGCCGACAAAACATACCCG AACCCTTTCTTCGTAACTTACACGAATACCTCCATGTTTATGATGCCTCTCATTCTCATCGTCGCTCGTCGAACA TGGGCTCTCTGGCGTCACGGGAAACTTTCTCAGATCACATCATTGAGGAGCTTTTTGAACCATTTGGATTCGCAT GACCCGAAGGCCGAGGAGGAGAGGATACTACGCAGCGGCTCAGATGAAGAGGACGGGCAATTCTCGCGGGGGAGA CAGGATCCTTCAAGCGGAAAGCTAGGGCTTAAAGCGACAGCTAAACTCAGTATTCAGTTTTGTCTGCTCTGGTTT ACTGCAAATTACTTCGCCATGGGATGTCTTCAATTCACGTCAGTTGCAAGCACAACCATTCTGACTTCCACCAGT GGTGTATGGACTATGGTCTTCGGCGCCCTGCTGCGTGTTGAGAAATTCACGATGCGCAAATTAATGGGTGTCTTG GCTTCTCTGATTGGCATTATCCTGATTTCGCGCGTAGATCTCTCCAAGCCAGAAACAGGCGAGGGCGCAGATAGT GGCGAGGGTTCATTCCCACACAAATCCTCAGGGGAGATTGCCCTTGGCGATGCCATGGCAGCGTTCAGTGCCATC TTGTACGGTCTTTATACCGTCGTGATGAAGAAACAAGTTGGCGACGAATCCCGGGTAAACATGCCACTCTTCTTC GGCCTGGTTGGATTTTTCAACATCATCTTTCTGTGGCCTGGTTTCTTCATCATGCACTGGACGGGGCTTGAGCCC TTCTCCTTACCCGAGACGTCGCGAGTGTGGTCAATCATTCTGACCAACGCGTTTGCATCATTTGTCTCCGACATT GCTTGGGCTTACTCCATGCTCCTCACCACCCCGCTTATCGTGACAGTCGGGCTTAGTATGACCATCCCGCTCTCC CTGATTGGACAGATGGTCCTACAGTCACAATACTCCAGCCCTCTGTACTGGGTTGGAGCCGCTATTGTGTTCTTG TCATTCTTGGTTGTGCAACACGAGAGTAAGCCTGAGGACGACCTCACCACTGATGCAGGCAGGACCTTCTCGGGT GAGTATAACAGTATTCCCGTTGAAGAAGAGGAAATGCGTTAG |
| Gene | >Pro_DTO377G3_2|g120.t1 ATGACCTTGACCACACACGAAGCACCTGGCACGATGCCACTGGGGATGGCGCGGCGAACATTAGGAATCATCCTG CTCCTAGTGGTGGTTGTGCTGTGGACAACCTCGAATTTCCTTGGAAGTGTATGCGCATCCCTTCCTGAGAAATCA TAACCTCGTAACGCAAAATACATACATTGTTACAAACATTTGGCTAATTACCCATGAAATGACATCCAGACTATC TTCGCCGACAAAACATACCCGAACCCTTTCTTCGTAACTTACACGAATACCTCCATGTTTATGATGCCTCTCATT CTCATCGTCGCTCGTCGAACATGGGCTCTCTGGCGTCACGGGAAACTTTCTCAGATCACATCATTGAGGAGCTTT TTGAACCATTTGGATTCGCATGACCCGAAGGCCGAGGAGGAGAGGATACTACGCAGCGGCTCAGATGAAGAGGAC GGGCAATTCTCGCGGGGGAGACAGGATCCTTCAAGCGGAAAGCTAGGGCTTAAAGCGACAGCTAAACTCAGTATT CAGTTTTGTCTGCTCTGGGTAAGCACAATGACCTTGAGGCTTAGATAGATGATCAGCTGGCTAACCTATCATAGT TTACTGTATGTCATACACCTCACGATATGGAAGCTTATGTGTTGGAAGGGAACTAATCGAGATTTCTTGGATAGG CAAATTACTTCGCCATGGGATGTCTTCAATTCACGTCAGTTGCAAGCACAACCATTCTGACTTCCACCAGTGGTA AGATTCCCCCGTTTAGATGTGTAAAGACCAGGTTCTCACCCTCACTCTTCTAGGTGTATGGACTATGGTCTTCGG CGCCCTGCTGCGTGTTGAGAAATTCACGATGCGCAAATTAATGGGTGTCTTGGCTTCTCTGATTGGCATTATCCT GATTTCGCGCGTAGATCTCTCCAAGCCAGAAACAGGCGAGGGCGCAGATAGTGGCGAGGGTTCATTCCCACACAA ATCCTCAGGGGAGATTGCCCTTGGCGATGCCATGGCAGCGTTCAGTGCCATCTTGTACGGTCTTTATACCGTCGT GATGAAGAAACAAGTTGGCGACGAATCCCGGGTAAACATGCCACTCTTCTTCGGCCTGGTTGGATTTTTCAACAT CATCTTTCTGTGGCCTGGTTTCTTCATCATGCACTGGACGGGGCTTGAGCCCTTCTCCTTACCCGAGACGTCGCG AGTGTGGTCAATCATTCTGGTATGGCTCCGACTCCTGTTGCTCACCTTTGATTCTAACCTCACGTCTATCAGACC AACGCGTTTGCATCATTTGTCTCCGACATTGCTTGGGCTTACTCCATGCTCCTCACCACCCCGCTTATCGTGACA GTCGGGCTTAGTATGACCATCCCGCTCTCCCTGATTGGACAGATGGTCCTACAGTCACAATACTCCAGCCCTCTG TACTGGGTTGGAGCCGCTATTGTGTTCTTGTCATTCTTGGTTGTGCAACACGAGAGTAAGCCTGAGGACGACCTC ACCACTGATGCAGGCAGGACCTTCTCGGGTGAGTATAACAGTATTCCCGTTGAAGAAGAGGAAATGCGTTAG |