Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1193.t1
Gene name
Locationscaffold_01:3150911..3152109
Strand-
Gene length (bp)1198
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00036 EF-hand_1 EF hand 9.5E-08 203 228
PF13499 EF-hand_7 EF-hand domain pair 1.5E-08 164 226
PF13833 EF-hand_8 EF-hand domain pair 4.7E-07 177 227
PF13833 EF-hand_8 EF-hand domain pair 7.0E-03 235 253
PF13202 EF-hand_5 EF hand 1.2E-03 207 225
PF13202 EF-hand_5 EF hand 8.7E-04 235 257
PF13202 EF-hand_5 EF hand 1.2E-01 312 327

GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0005488 binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1193.t1
MAYNKSYNPDALPAHAEPEEAAQMLSNMSVSGHTPSHTQKPLPSRPSPQGTHSGVPPRVPVSSSSAPQHAYASAP
PRLESQPYHSHSHSNSYSGRPSATNAPPPSQHFSQSQSRPHPLHPSPPPQNYGFGPPPVHPQRNRPPPSSRPPQS
PAPPPLTAPSDDPQQLFPLFRAANASHSGTLTEGELGSALVNGDYTSFHPRTVRLMIRMFDRDGSGTINFDEFVS
LWRYLAAWRELFDRFDEDRSGRISQREFENALVAFGYRLSGKFISVIFGVFEAKAKQMSNAPKDYRSTGMSFDLF
VQACISLKRMTDVFKRYDDDRDGYITLSFEEALTEILLLQE*
Coding >Pro_DTO377G3_2|g1193.t1
ATGGCCTACAACAAATCCTACAACCCCGACGCGCTGCCAGCTCATGCTGAGCCAGAAGAGGCGGCGCAGATGTTA
AGCAACATGAGTGTATCAGGCCACACTCCGAGTCACACCCAAAAACCGCTCCCATCTCGCCCGTCACCGCAAGGA
ACCCACAGCGGTGTCCCTCCACGTGTTCCTGTATCCAGCTCTAGCGCTCCCCAGCACGCATACGCCTCCGCGCCT
CCACGCCTTGAGTCCCAGCCTTACCACTCCCACTCCCACTCCAACTCCTACAGCGGCCGCCCCTCGGCAACAAAC
GCGCCCCCGCCAAGTCAACACTTCAGCCAGTCCCAGTCTCGTCCTCACCCCCTCCACCCCTCCCCGCCACCCCAG
AACTACGGGTTCGGCCCCCCACCAGTACACCCCCAGCGCAACCGACCCCCGCCCTCATCGCGGCCTCCCCAATCG
CCCGCCCCACCGCCATTGACAGCACCCAGCGATGACCCGCAACAACTCTTCCCCCTCTTCCGCGCCGCGAACGCG
TCCCACTCCGGCACCCTCACCGAAGGGGAGCTCGGCAGCGCGCTCGTGAACGGCGACTACACGTCCTTCCACCCG
CGGACGGTCAGGCTGATGATCCGGATGTTCGACCGCGACGGCAGTGGGACCATCAACTTCGACGAGTTTGTCTCA
CTGTGGCGGTATCTGGCTGCATGGCGGGAGCTGTTCGATCGCTTTGACGAAGACCGCAGTGGACGCATCAGCCAG
CGGGAGTTCGAGAACGCGCTTGTTGCGTTCGGATATCGTCTTAGCGGGAAGTTCATTTCTGTTATCTTTGGTGTC
TTTGAAGCCAAGGCTAAGCAGATGAGCAATGCGCCTAAGGACTACAGGTCTACTGGTATGAGCTTTGATCTTTTC
GTTCAGGCTTGTATCAGTCTGAAGCGTATGACGGATGTGTTCAAGCGGTATGATGATGATCGGGATGGGTATATC
ACCCTAAGCTTTGAAGAAGCTTTGACTGAGATTCTTCTATTGCAGGAGTAA
Transcript >Pro_DTO377G3_2|g1193.t1
ATGGCCTACAACAAATCCTACAACCCCGACGCGCTGCCAGCTCATGCTGAGCCAGAAGAGGCGGCGCAGATGTTA
AGCAACATGAGTGTATCAGGCCACACTCCGAGTCACACCCAAAAACCGCTCCCATCTCGCCCGTCACCGCAAGGA
ACCCACAGCGGTGTCCCTCCACGTGTTCCTGTATCCAGCTCTAGCGCTCCCCAGCACGCATACGCCTCCGCGCCT
CCACGCCTTGAGTCCCAGCCTTACCACTCCCACTCCCACTCCAACTCCTACAGCGGCCGCCCCTCGGCAACAAAC
GCGCCCCCGCCAAGTCAACACTTCAGCCAGTCCCAGTCTCGTCCTCACCCCCTCCACCCCTCCCCGCCACCCCAG
AACTACGGGTTCGGCCCCCCACCAGTACACCCCCAGCGCAACCGACCCCCGCCCTCATCGCGGCCTCCCCAATCG
CCCGCCCCACCGCCATTGACAGCACCCAGCGATGACCCGCAACAACTCTTCCCCCTCTTCCGCGCCGCGAACGCG
TCCCACTCCGGCACCCTCACCGAAGGGGAGCTCGGCAGCGCGCTCGTGAACGGCGACTACACGTCCTTCCACCCG
CGGACGGTCAGGCTGATGATCCGGATGTTCGACCGCGACGGCAGTGGGACCATCAACTTCGACGAGTTTGTCTCA
CTGTGGCGGTATCTGGCTGCATGGCGGGAGCTGTTCGATCGCTTTGACGAAGACCGCAGTGGACGCATCAGCCAG
CGGGAGTTCGAGAACGCGCTTGTTGCGTTCGGATATCGTCTTAGCGGGAAGTTCATTTCTGTTATCTTTGGTGTC
TTTGAAGCCAAGGCTAAGCAGATGAGCAATGCGCCTAAGGACTACAGGTCTACTGGTATGAGCTTTGATCTTTTC
GTTCAGGCTTGTATCAGTCTGAAGCGTATGACGGATGTGTTCAAGCGGTATGATGATGATCGGGATGGGTATATC
ACCCTAAGCTTTGAAGAAGCTTTGACTGAGATTCTTCTATTGCAGGAGTAA
Gene >Pro_DTO377G3_2|g1193.t1
ATGGCCTACAACAAATCCTACAACCCCGACGCGCTGCCAGCGTAAGTGCATACTCTAGGCATCTTCTGCAGCTAC
TGATTACTGACTTGGGAAATATTAGTCATGCTGAGCCAGAAGAGGTACAACATCTGTTACACGCCTTAGACTCTT
TTCGTTAACCCTCAATTAGGCGGCGCAGATGTTAAGCAACATGAGTGTATCAGGCCACACTCCGAGTCACACCCA
AAAACCGCTCCCATCTCGCCCGTCACCGCAAGGAACCCACAGCGGTGTCCCTCCACGTGTTCCTGTATCCAGCTC
TAGCGCTCCCCAGCACGCATACGCCTCCGCGCCTCCACGCCTTGAGTCCCAGCCTTACCACTCCCACTCCCACTC
CAACTCCTACAGCGGCCGCCCCTCGGCAACAAACGCGCCCCCGCCAAGTCAACACTTCAGCCAGTCCCAGTCTCG
TCCTCACCCCCTCCACCCCTCCCCGCCACCCCAGAACTACGGGTTCGGCCCCCCACCAGTACACCCCCAGCGCAA
CCGACCCCCGCCCTCATCGCGGCCTCCCCAATCGCCCGCCCCACCGCCATTGACAGCACCCAGCGATGACCCGCA
ACAACTCTTCCCCCTCTTCCGCGCCGCGAACGCGTCCCACTCCGGCACCCTCACCGAAGGGGAGCTCGGCAGCGC
GCTCGTGAACGGCGACTACACGTCCTTCCACCCGCGGACGGTCAGGCTGATGATCCGGATGTTCGACCGCGACGG
CAGTGGGACCATCAACTTCGACGAGTTTGTCTCACTGTGGCGGTATCTGGCTGCATGGCGGGAGCTGTTCGATCG
CTTTGACGAAGACCGCAGTGGACGCATCAGCCAGCGGGAGTTCGAGAACGCGCTTGTTGCGTTCGGATATCGTCT
TAGCGGGAAGTTCATTTCTGTTATCTTTGGTGTCTTTGAAGCCAAGGCTAAGCAGATGAGCAATGCGCCTAAGGA
CTACAGGTCTACTGGTATGAGCTTTGATCTTTTCGTTCAGGCTTGTATCAGTCTGAAGCGTATGACGGATGTGTT
CAAGCGGTATGATGATGATCGGGATGGGTATATCACCCTAAGCTTTGAAGAAGCTTTGACTGGTAGGTTTTGGTG
TCTGTTGTGTTGTTGGGGATCAGTGGCTAACTGGAAATCGCTTTTTACAGAGATTCTTCTATTGCAGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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