Protein ID | Pro_DTO377G3_2|g1193.t1 |
Gene name | |
Location | scaffold_01:3150911..3152109 |
Strand | - |
Gene length (bp) | 1198 |
Transcript length (bp) | 1026 |
Coding sequence length (bp) | 1026 |
Protein length (aa) | 342 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00036 | EF-hand_1 | EF hand | 9.5E-08 | 203 | 228 |
PF13499 | EF-hand_7 | EF-hand domain pair | 1.5E-08 | 164 | 226 |
PF13833 | EF-hand_8 | EF-hand domain pair | 4.7E-07 | 177 | 227 |
PF13833 | EF-hand_8 | EF-hand domain pair | 7.0E-03 | 235 | 253 |
PF13202 | EF-hand_5 | EF hand | 1.2E-03 | 207 | 225 |
PF13202 | EF-hand_5 | EF hand | 8.7E-04 | 235 | 257 |
PF13202 | EF-hand_5 | EF hand | 1.2E-01 | 312 | 327 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005509 | calcium ion binding | Yes |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046872 | metal ion binding | No |
GO:0043169 | cation binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 2 |
Orthogroup | 3592 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1193.t1 MAYNKSYNPDALPAHAEPEEAAQMLSNMSVSGHTPSHTQKPLPSRPSPQGTHSGVPPRVPVSSSSAPQHAYASAP PRLESQPYHSHSHSNSYSGRPSATNAPPPSQHFSQSQSRPHPLHPSPPPQNYGFGPPPVHPQRNRPPPSSRPPQS PAPPPLTAPSDDPQQLFPLFRAANASHSGTLTEGELGSALVNGDYTSFHPRTVRLMIRMFDRDGSGTINFDEFVS LWRYLAAWRELFDRFDEDRSGRISQREFENALVAFGYRLSGKFISVIFGVFEAKAKQMSNAPKDYRSTGMSFDLF VQACISLKRMTDVFKRYDDDRDGYITLSFEEALTEILLLQE* |
Coding | >Pro_DTO377G3_2|g1193.t1 ATGGCCTACAACAAATCCTACAACCCCGACGCGCTGCCAGCTCATGCTGAGCCAGAAGAGGCGGCGCAGATGTTA AGCAACATGAGTGTATCAGGCCACACTCCGAGTCACACCCAAAAACCGCTCCCATCTCGCCCGTCACCGCAAGGA ACCCACAGCGGTGTCCCTCCACGTGTTCCTGTATCCAGCTCTAGCGCTCCCCAGCACGCATACGCCTCCGCGCCT CCACGCCTTGAGTCCCAGCCTTACCACTCCCACTCCCACTCCAACTCCTACAGCGGCCGCCCCTCGGCAACAAAC GCGCCCCCGCCAAGTCAACACTTCAGCCAGTCCCAGTCTCGTCCTCACCCCCTCCACCCCTCCCCGCCACCCCAG AACTACGGGTTCGGCCCCCCACCAGTACACCCCCAGCGCAACCGACCCCCGCCCTCATCGCGGCCTCCCCAATCG CCCGCCCCACCGCCATTGACAGCACCCAGCGATGACCCGCAACAACTCTTCCCCCTCTTCCGCGCCGCGAACGCG TCCCACTCCGGCACCCTCACCGAAGGGGAGCTCGGCAGCGCGCTCGTGAACGGCGACTACACGTCCTTCCACCCG CGGACGGTCAGGCTGATGATCCGGATGTTCGACCGCGACGGCAGTGGGACCATCAACTTCGACGAGTTTGTCTCA CTGTGGCGGTATCTGGCTGCATGGCGGGAGCTGTTCGATCGCTTTGACGAAGACCGCAGTGGACGCATCAGCCAG CGGGAGTTCGAGAACGCGCTTGTTGCGTTCGGATATCGTCTTAGCGGGAAGTTCATTTCTGTTATCTTTGGTGTC TTTGAAGCCAAGGCTAAGCAGATGAGCAATGCGCCTAAGGACTACAGGTCTACTGGTATGAGCTTTGATCTTTTC GTTCAGGCTTGTATCAGTCTGAAGCGTATGACGGATGTGTTCAAGCGGTATGATGATGATCGGGATGGGTATATC ACCCTAAGCTTTGAAGAAGCTTTGACTGAGATTCTTCTATTGCAGGAGTAA |
Transcript | >Pro_DTO377G3_2|g1193.t1 ATGGCCTACAACAAATCCTACAACCCCGACGCGCTGCCAGCTCATGCTGAGCCAGAAGAGGCGGCGCAGATGTTA AGCAACATGAGTGTATCAGGCCACACTCCGAGTCACACCCAAAAACCGCTCCCATCTCGCCCGTCACCGCAAGGA ACCCACAGCGGTGTCCCTCCACGTGTTCCTGTATCCAGCTCTAGCGCTCCCCAGCACGCATACGCCTCCGCGCCT CCACGCCTTGAGTCCCAGCCTTACCACTCCCACTCCCACTCCAACTCCTACAGCGGCCGCCCCTCGGCAACAAAC GCGCCCCCGCCAAGTCAACACTTCAGCCAGTCCCAGTCTCGTCCTCACCCCCTCCACCCCTCCCCGCCACCCCAG AACTACGGGTTCGGCCCCCCACCAGTACACCCCCAGCGCAACCGACCCCCGCCCTCATCGCGGCCTCCCCAATCG CCCGCCCCACCGCCATTGACAGCACCCAGCGATGACCCGCAACAACTCTTCCCCCTCTTCCGCGCCGCGAACGCG TCCCACTCCGGCACCCTCACCGAAGGGGAGCTCGGCAGCGCGCTCGTGAACGGCGACTACACGTCCTTCCACCCG CGGACGGTCAGGCTGATGATCCGGATGTTCGACCGCGACGGCAGTGGGACCATCAACTTCGACGAGTTTGTCTCA CTGTGGCGGTATCTGGCTGCATGGCGGGAGCTGTTCGATCGCTTTGACGAAGACCGCAGTGGACGCATCAGCCAG CGGGAGTTCGAGAACGCGCTTGTTGCGTTCGGATATCGTCTTAGCGGGAAGTTCATTTCTGTTATCTTTGGTGTC TTTGAAGCCAAGGCTAAGCAGATGAGCAATGCGCCTAAGGACTACAGGTCTACTGGTATGAGCTTTGATCTTTTC GTTCAGGCTTGTATCAGTCTGAAGCGTATGACGGATGTGTTCAAGCGGTATGATGATGATCGGGATGGGTATATC ACCCTAAGCTTTGAAGAAGCTTTGACTGAGATTCTTCTATTGCAGGAGTAA |
Gene | >Pro_DTO377G3_2|g1193.t1 ATGGCCTACAACAAATCCTACAACCCCGACGCGCTGCCAGCGTAAGTGCATACTCTAGGCATCTTCTGCAGCTAC TGATTACTGACTTGGGAAATATTAGTCATGCTGAGCCAGAAGAGGTACAACATCTGTTACACGCCTTAGACTCTT TTCGTTAACCCTCAATTAGGCGGCGCAGATGTTAAGCAACATGAGTGTATCAGGCCACACTCCGAGTCACACCCA AAAACCGCTCCCATCTCGCCCGTCACCGCAAGGAACCCACAGCGGTGTCCCTCCACGTGTTCCTGTATCCAGCTC TAGCGCTCCCCAGCACGCATACGCCTCCGCGCCTCCACGCCTTGAGTCCCAGCCTTACCACTCCCACTCCCACTC CAACTCCTACAGCGGCCGCCCCTCGGCAACAAACGCGCCCCCGCCAAGTCAACACTTCAGCCAGTCCCAGTCTCG TCCTCACCCCCTCCACCCCTCCCCGCCACCCCAGAACTACGGGTTCGGCCCCCCACCAGTACACCCCCAGCGCAA CCGACCCCCGCCCTCATCGCGGCCTCCCCAATCGCCCGCCCCACCGCCATTGACAGCACCCAGCGATGACCCGCA ACAACTCTTCCCCCTCTTCCGCGCCGCGAACGCGTCCCACTCCGGCACCCTCACCGAAGGGGAGCTCGGCAGCGC GCTCGTGAACGGCGACTACACGTCCTTCCACCCGCGGACGGTCAGGCTGATGATCCGGATGTTCGACCGCGACGG CAGTGGGACCATCAACTTCGACGAGTTTGTCTCACTGTGGCGGTATCTGGCTGCATGGCGGGAGCTGTTCGATCG CTTTGACGAAGACCGCAGTGGACGCATCAGCCAGCGGGAGTTCGAGAACGCGCTTGTTGCGTTCGGATATCGTCT TAGCGGGAAGTTCATTTCTGTTATCTTTGGTGTCTTTGAAGCCAAGGCTAAGCAGATGAGCAATGCGCCTAAGGA CTACAGGTCTACTGGTATGAGCTTTGATCTTTTCGTTCAGGCTTGTATCAGTCTGAAGCGTATGACGGATGTGTT CAAGCGGTATGATGATGATCGGGATGGGTATATCACCCTAAGCTTTGAAGAAGCTTTGACTGGTAGGTTTTGGTG TCTGTTGTGTTGTTGGGGATCAGTGGCTAACTGGAAATCGCTTTTTACAGAGATTCTTCTATTGCAGGAGTAA |