Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1176.t1
Gene name
Locationscaffold_01:3099630..3101144
Strand-
Gene length (bp)1514
Transcript length (bp)1401
Coding sequence length (bp)1401
Protein length (aa) 467

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12710 HAD haloacid dehalogenase-like hydrolase 2.2E-22 245 416
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 2.9E-16 244 420
PF08282 Hydrolase_3 haloacid dehalogenase-like hydrolase 1.3E-07 384 426

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1176.t1
MADSTRTRPSLGQMRSSSFLQDHQQYKPMAPITPISQTIGEVLANQVNDRLILSSNPIKPDPDRVTDSGIIHSIF
NHQENPLPTGTSQIVATIYYKSNHPIHPHYHPDLGPQNSPGDKIPAPEVPKGSAPTQDMDKFPREPPALEPEPLD
HLYGPYVSQLCLTNFLQILETLPTPYQRMNTSHRCLDRDEHPRVVEVTFSPPPNPDYLSFPDLRKHESIWRFERE
WNVEVVLQKETVFRRHKRLAVFDMDSTLIENECIDEIAKFIGVEKEVSAITERAMNGELDFTASLKERVSLLNGV
SADVFEKLKSILTIAKGARELCRALKTLGFTIAVVSGGFQPLAAWLAEQLGIDIAIANHLEIDEATQTLTGKLVP
SYPIVDAEHKRSLLKSIAAEHGIPLSQTLAVGDGANDLLMLHTAGLGVAWRAKSKVQLEAPVRINGESLVDILYL
LGMDNEDIAELTSDVQ*
Coding >Pro_DTO377G3_2|g1176.t1
ATGGCAGATTCTACCCGTACCAGGCCGTCCCTCGGCCAAATGCGCAGCAGTTCATTCCTGCAGGACCACCAGCAG
TACAAACCGATGGCACCAATCACTCCAATCAGTCAAACCATCGGCGAGGTTCTGGCTAACCAGGTGAACGATCGT
CTGATACTTAGCTCGAATCCAATCAAGCCAGATCCGGATAGGGTCACCGACAGCGGCATCATTCATAGCATCTTC
AACCACCAAGAAAACCCTCTTCCAACCGGCACGTCGCAAATCGTCGCGACCATCTACTACAAATCAAACCACCCC
ATTCACCCCCACTACCACCCCGATTTAGGGCCCCAGAATAGTCCAGGCGACAAGATCCCAGCTCCCGAGGTGCCC
AAAGGCTCTGCCCCGACACAAGACATGGACAAATTCCCACGGGAGCCGCCTGCCCTAGAGCCGGAGCCACTGGAT
CACCTGTACGGGCCATACGTCTCTCAGCTGTGCCTGACCAACTTCCTTCAGATCTTGGAAACCCTCCCCACGCCC
TATCAGCGCATGAACACCTCGCACCGCTGTCTTGACCGCGACGAACACCCCCGCGTCGTGGAGGTCACATTCTCT
CCTCCGCCAAACCCGGACTATCTTTCCTTCCCGGATCTGCGCAAGCATGAAAGCATCTGGCGCTTTGAGCGCGAG
TGGAACGTCGAGGTTGTTCTGCAAAAGGAGACCGTCTTCCGTCGACACAAGCGCCTGGCAGTGTTTGACATGGAT
AGCACCTTGATTGAAAATGAGTGCATTGACGAAATTGCCAAATTTATTGGTGTCGAGAAGGAGGTTTCCGCAATC
ACTGAACGCGCCATGAACGGCGAACTAGATTTCACCGCGTCACTGAAGGAACGCGTCAGTCTTCTCAACGGCGTC
TCCGCAGACGTCTTCGAGAAGCTCAAGTCTATCCTGACAATCGCCAAGGGCGCCCGTGAGCTCTGCCGCGCATTG
AAGACTCTGGGCTTCACGATCGCAGTGGTGAGCGGCGGGTTCCAGCCCCTGGCCGCATGGCTCGCCGAGCAGCTC
GGTATCGACATTGCCATTGCTAACCACCTCGAAATCGACGAGGCCACCCAAACCCTGACCGGCAAATTGGTGCCG
TCCTACCCTATCGTCGACGCCGAGCACAAGCGCTCTCTACTCAAGTCCATCGCCGCTGAGCACGGCATCCCCCTC
TCGCAAACCCTAGCCGTCGGCGACGGCGCCAATGATCTCCTCATGCTCCACACTGCAGGCCTCGGCGTCGCCTGG
CGCGCCAAGTCCAAGGTCCAGTTAGAAGCTCCCGTCCGCATCAACGGCGAGAGCCTTGTCGATATCCTCTACCTG
CTCGGCATGGACAACGAGGACATCGCGGAGCTGACCTCCGACGTGCAATAA
Transcript >Pro_DTO377G3_2|g1176.t1
ATGGCAGATTCTACCCGTACCAGGCCGTCCCTCGGCCAAATGCGCAGCAGTTCATTCCTGCAGGACCACCAGCAG
TACAAACCGATGGCACCAATCACTCCAATCAGTCAAACCATCGGCGAGGTTCTGGCTAACCAGGTGAACGATCGT
CTGATACTTAGCTCGAATCCAATCAAGCCAGATCCGGATAGGGTCACCGACAGCGGCATCATTCATAGCATCTTC
AACCACCAAGAAAACCCTCTTCCAACCGGCACGTCGCAAATCGTCGCGACCATCTACTACAAATCAAACCACCCC
ATTCACCCCCACTACCACCCCGATTTAGGGCCCCAGAATAGTCCAGGCGACAAGATCCCAGCTCCCGAGGTGCCC
AAAGGCTCTGCCCCGACACAAGACATGGACAAATTCCCACGGGAGCCGCCTGCCCTAGAGCCGGAGCCACTGGAT
CACCTGTACGGGCCATACGTCTCTCAGCTGTGCCTGACCAACTTCCTTCAGATCTTGGAAACCCTCCCCACGCCC
TATCAGCGCATGAACACCTCGCACCGCTGTCTTGACCGCGACGAACACCCCCGCGTCGTGGAGGTCACATTCTCT
CCTCCGCCAAACCCGGACTATCTTTCCTTCCCGGATCTGCGCAAGCATGAAAGCATCTGGCGCTTTGAGCGCGAG
TGGAACGTCGAGGTTGTTCTGCAAAAGGAGACCGTCTTCCGTCGACACAAGCGCCTGGCAGTGTTTGACATGGAT
AGCACCTTGATTGAAAATGAGTGCATTGACGAAATTGCCAAATTTATTGGTGTCGAGAAGGAGGTTTCCGCAATC
ACTGAACGCGCCATGAACGGCGAACTAGATTTCACCGCGTCACTGAAGGAACGCGTCAGTCTTCTCAACGGCGTC
TCCGCAGACGTCTTCGAGAAGCTCAAGTCTATCCTGACAATCGCCAAGGGCGCCCGTGAGCTCTGCCGCGCATTG
AAGACTCTGGGCTTCACGATCGCAGTGGTGAGCGGCGGGTTCCAGCCCCTGGCCGCATGGCTCGCCGAGCAGCTC
GGTATCGACATTGCCATTGCTAACCACCTCGAAATCGACGAGGCCACCCAAACCCTGACCGGCAAATTGGTGCCG
TCCTACCCTATCGTCGACGCCGAGCACAAGCGCTCTCTACTCAAGTCCATCGCCGCTGAGCACGGCATCCCCCTC
TCGCAAACCCTAGCCGTCGGCGACGGCGCCAATGATCTCCTCATGCTCCACACTGCAGGCCTCGGCGTCGCCTGG
CGCGCCAAGTCCAAGGTCCAGTTAGAAGCTCCCGTCCGCATCAACGGCGAGAGCCTTGTCGATATCCTCTACCTG
CTCGGCATGGACAACGAGGACATCGCGGAGCTGACCTCCGACGTGCAATAA
Gene >Pro_DTO377G3_2|g1176.t1
ATGGCAGATTCTACCCGTACCAGGCCGTCCCTCGGCCAAATGCGCAGCAGTTCATTCCTGCAGGACCACCAGCAG
TACAAACCGATGGCACCAATCACTCCAATCAGTCAAACCATCGGCGAGGTTCTGGCTAACCAGGTGAACGATCGT
CTGATACTTAGCTCGAATCCAATCAAGCCAGATCCGGATAGGGTCACCGACAGCGGCATCATTCATAGCATCTTC
AACCACCAAGAAAACCCTCTTCCAACCGGCACGTCGCAAATCGTCGCGACCATCTACTACAAATCAAACCACCCC
ATTCACCCCCACTACCACCCCGATTTAGGGCCCCAGAATAGTCCAGGCGACAAGATCCCAGCTCCCGAGGTGCCC
AAAGGCTCTGCCCCGACACAAGACATGGACAAATTCCCACGGGAGCCGCCTGCCCTAGAGCCGGAGCCACTGGAT
CACCTGTACGGGCCATACGTCTCTCAGCTGTGCCTGACCAACTTCCTTCAGATCTTGGAAACCCTCCCCACGCCC
TATCAGCGCATGAACACCTCGCACCGCTGTCTTGACCGCGACGAACACCCCCGCGTCGTGGAGGTCACATTCTCT
CCTCCGCCAAACCCGGACTATCTTTCCTTCCCGGATCTGCGCAAGCATGAAAGCATCTGGCGCTTTGAGCGCGAG
TGGAACGTCGAGGTTGTTCTGCAAAAGGAGACCGTCTTCCGTCGACACAAGCGCCTGGCAGTGTTTGACATGGAT
AGCACCTTGATTGAAAATGAGTGCATTGACGAAATTGCCAAATTTATTGGTGTCGAGAAGGAGGTTTCCGTAAGT
CCTTCTTGACATACTTCAATTCTCTATGCCAGCGACTAACATCACCGCAGGCAATCACTGAACGCGCCATGAACG
GCGAACTAGATTTCACCGCGTCACTGAAGGAACGCGTCAGTCTTCTCAACGGCGTCTCCGCAGACGTCTTCGAGA
AGCTCAAGTCTATCCTGACAATCGCCAAGGGCGCCCGTGAGCTCTGCCGCGCATTGAAGACTCTGGGCTTCACGA
TCGCAGTGGTGAGCGGCGGGTTCCAGCCCCTGGCCGCATGGCTCGCCGAGCAGCTCGGTATCGACATTGCCATTG
CTAACCACGTAAGCCTCTCCTGTTTCCTACTATCTCTATTTCATCCGACCTGACAATTCATCTAGCTCGAAATCG
ACGAGGCCACCCAAACCCTGACCGGCAAATTGGTGCCGTCCTACCCTATCGTCGACGCCGAGCACAAGCGCTCTC
TACTCAAGTCCATCGCCGCTGAGCACGGCATCCCCCTCTCGCAAACCCTAGCCGTCGGCGACGGCGCCAATGATC
TCCTCATGCTCCACACTGCAGGCCTCGGCGTCGCCTGGCGCGCCAAGTCCAAGGTCCAGTTAGAAGCTCCCGTCC
GCATCAACGGCGAGAGCCTTGTCGATATCCTCTACCTGCTCGGCATGGACAACGAGGACATCGCGGAGCTGACCT
CCGACGTGCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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