Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1145.t1
Gene name
Locationscaffold_01:3023315..3023851
Strand+
Gene length (bp)536
Transcript length (bp)471
Coding sequence length (bp)471
Protein length (aa) 157

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 54 76 22
3 83 105 22
4 120 142 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1145.t1
MPTIFPLWPHILFGVLEPISLALGSAYPIYNLQGFIAGQTPNIAAPATLHPSSVALAYQLGNVYSLLFLVGVGVC
HATTEPRVLRNYLIGLAIADIGHVYATYLAMGWDAFADVAAWNALTWGNIGVTMFLFVNRIAYFLGIFGYAKAPK
AAAKRD*
Coding >Pro_DTO377G3_2|g1145.t1
ATGCCCACCATCTTTCCACTATGGCCACACATCCTCTTTGGCGTCCTTGAGCCTATCTCCCTGGCCCTCGGTAGT
GCCTACCCTATCTACAACCTCCAAGGCTTTATCGCCGGGCAAACCCCCAACATCGCAGCCCCGGCCACCCTGCAC
CCAAGCAGCGTCGCGCTCGCCTACCAGCTCGGCAATGTCTACTCACTCCTCTTCCTAGTCGGCGTGGGTGTCTGC
CATGCGACAACGGAACCAAGGGTACTCCGCAACTATCTAATCGGGCTGGCCATCGCCGACATTGGTCATGTCTAC
GCCACGTACTTGGCGATGGGCTGGGACGCATTTGCGGACGTTGCGGCATGGAACGCTTTGACCTGGGGTAACATC
GGGGTCACGATGTTCTTGTTCGTCAATAGGATCGCTTATTTCCTGGGCATTTTTGGTTATGCGAAGGCGCCGAAG
GCGGCTGCAAAGCGGGACTGA
Transcript >Pro_DTO377G3_2|g1145.t1
ATGCCCACCATCTTTCCACTATGGCCACACATCCTCTTTGGCGTCCTTGAGCCTATCTCCCTGGCCCTCGGTAGT
GCCTACCCTATCTACAACCTCCAAGGCTTTATCGCCGGGCAAACCCCCAACATCGCAGCCCCGGCCACCCTGCAC
CCAAGCAGCGTCGCGCTCGCCTACCAGCTCGGCAATGTCTACTCACTCCTCTTCCTAGTCGGCGTGGGTGTCTGC
CATGCGACAACGGAACCAAGGGTACTCCGCAACTATCTAATCGGGCTGGCCATCGCCGACATTGGTCATGTCTAC
GCCACGTACTTGGCGATGGGCTGGGACGCATTTGCGGACGTTGCGGCATGGAACGCTTTGACCTGGGGTAACATC
GGGGTCACGATGTTCTTGTTCGTCAATAGGATCGCTTATTTCCTGGGCATTTTTGGTTATGCGAAGGCGCCGAAG
GCGGCTGCAAAGCGGGACTGA
Gene >Pro_DTO377G3_2|g1145.t1
ATGCCCACCATCTTTCCACTATGGCCACACATCCTCTTTGGCGTCCTTGAGCCTATCTCCCTGTACGACCAGCCC
AATCCTTTCCTTGAAATGCAAGAATACTACTGACTTACTATCCTTAATGCAGGGCCCTCGGTAGTGCCTACCCTA
TCTACAACCTCCAAGGCTTTATCGCCGGGCAAACCCCCAACATCGCAGCCCCGGCCACCCTGCACCCAAGCAGCG
TCGCGCTCGCCTACCAGCTCGGCAATGTCTACTCACTCCTCTTCCTAGTCGGCGTGGGTGTCTGCCATGCGACAA
CGGAACCAAGGGTACTCCGCAACTATCTAATCGGGCTGGCCATCGCCGACATTGGTCATGTCTACGCCACGTACT
TGGCGATGGGCTGGGACGCATTTGCGGACGTTGCGGCATGGAACGCTTTGACCTGGGGTAACATCGGGGTCACGA
TGTTCTTGTTCGTCAATAGGATCGCTTATTTCCTGGGCATTTTTGGTTATGCGAAGGCGCCGAAGGCGGCTGCAA
AGCGGGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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