Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1143.t1
Gene name
Locationscaffold_01:3019326..3019999
Strand+
Gene length (bp)673
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00787 PX PX domain 2.7E-26 21 133

GO

GO Term Description Terminal node
GO:0035091 phosphatidylinositol binding Yes
GO:0008289 lipid binding No
GO:0043168 anion binding No
GO:0005488 binding No
GO:0005543 phospholipid binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1143.t1
MQSVPESRQQSFEEIYGPPENFLEIEVRNPQTHGTSRNMYTSYEIVCRTNIPAFKLKHSVVRRRYSDFEYFRDIL
ERESTRVTIPPLPGKVFTNRFSDDVIEHRREGLQRFLQIVAGHPLLQTGSKVLASYIQDPNWDRNAW*
Coding >Pro_DTO377G3_2|g1143.t1
ATGCAGTCCGTCCCAGAATCGCGACAGCAGTCGTTCGAGGAGATCTACGGACCTCCCGAGAACTTCCTCGAGATA
GAAGTCCGCAACCCCCAGACCCATGGCACATCCCGCAACATGTACACGTCGTACGAGATTGTGTGCCGGACCAAC
ATCCCCGCCTTCAAATTGAAACACTCCGTCGTGCGCCGCCGTTACTCTGATTTCGAGTATTTCCGCGATATCCTC
GAGCGCGAAAGCACGCGTGTCACGATACCCCCACTGCCAGGGAAGGTTTTCACCAACCGGTTCAGCGACGACGTC
ATCGAGCATCGCCGCGAAGGTCTGCAGCGCTTCCTCCAGATCGTCGCCGGACACCCTCTTCTGCAGACGGGGAGT
AAGGTGCTTGCTAGCTACATACAAGATCCCAACTGGGACCGCAATGCGTGGTAG
Transcript >Pro_DTO377G3_2|g1143.t1
ATGCAGTCCGTCCCAGAATCGCGACAGCAGTCGTTCGAGGAGATCTACGGACCTCCCGAGAACTTCCTCGAGATA
GAAGTCCGCAACCCCCAGACCCATGGCACATCCCGCAACATGTACACGTCGTACGAGATTGTGTGCCGGACCAAC
ATCCCCGCCTTCAAATTGAAACACTCCGTCGTGCGCCGCCGTTACTCTGATTTCGAGTATTTCCGCGATATCCTC
GAGCGCGAAAGCACGCGTGTCACGATACCCCCACTGCCAGGGAAGGTTTTCACCAACCGGTTCAGCGACGACGTC
ATCGAGCATCGCCGCGAAGGTCTGCAGCGCTTCCTCCAGATCGTCGCCGGACACCCTCTTCTGCAGACGGGGAGT
AAGGTGCTTGCTAGCTACATACAAGATCCCAACTGGGACCGCAATGCGTGGTAG
Gene >Pro_DTO377G3_2|g1143.t1
ATGCAGTCCGTCCCAGAATCGCGACAGCAGTCGTTCGAGGAGATCTACGGACCTCCCGAGAACTTCCTCGAGATA
GAAGTGAGTTACTTAGCGCCTAATACCCAATATCCACTCCCGAATCAATCACCTACCCCAATACCCCAGAGTCTC
GTGCCCATATCTTCCCCTAATCAAGCCCCCATACATCCCCACCCAAAACCCGCATCAACAACCCCCATCGGGCAC
CAAGAACGAAAAATCCAGACTAACAACGACTGCAACAGGTCCGCAACCCCCAGACCCATGGCACATCCCGCAACA
TGTACACGTCGTACGAGATTGTGTGCCGGACCAACATCCCCGCCTTCAAATTGAAACACTCCGTCGTGCGCCGCC
GTTACTCTGATTTCGAGTATTTCCGCGATATCCTCGAGCGCGAAAGCACGCGTGTCACGATACCCCCACTGCCAG
GGAAGGTTTTCACCAACCGGTTCAGCGACGACGTCATCGAGCATCGCCGCGAAGGTCTGCAGCGCTTCCTCCAGA
TCGTCGCCGGACACCCTCTTCTGCAGACGGGGAGTAAGGTGCTTGCTAGCTACATACAAGGTGGGTTTATTCTAG
TCACTTGTGCGGATTGTTGAACGTCTGCTAATCTCATCTTGCAGATCCCAACTGGGACCGCAATGCGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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