Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1127.t1
Gene name
Locationscaffold_01:2976169..2977411
Strand+
Gene length (bp)1242
Transcript length (bp)1191
Coding sequence length (bp)1191
Protein length (aa) 397

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 4.6E-04 51 83
PF00400 WD40 WD domain, G-beta repeat 1.4E-04 88 141
PF00400 WD40 WD domain, G-beta repeat 5.3E-04 164 197
PF00400 WD40 WD domain, G-beta repeat 2.5E-03 202 239
PF00400 WD40 WD domain, G-beta repeat 9.9E-08 283 318

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1127.t1
MWKNTKPTHIAFQAHNRHVLTCLQFDADKIIVGSDNAKISVYDTKTGALRATLEGHEGGIWGLEYHGNTLVSVST
DRSVRVWDIAKAKCTHVFKGHTSTVRTVQLLLPVQIGQHPDGTPVMMPEQPLIISGSRDSTMRVWKLPQPGDEEY
FPPAQSDEECPYLIHVLAGHQHSVRATAAHGDTLVSGSYDSTVRVWKVSTGESLHRLEGHRYKVYNVSLDHERNR
CISGSMDNMVKIWSLDTGALLYNLEGHSSLVGLLDLKDDLLVSAAADSMLKVWNPANGHCQHTLSGHTSAVTSFQ
HDGQKVISGSDGEVKLWDIQTGVFERDLLTNLSGVWQVQFDAQRCVAAVQRGNLSYIEILDFGASPDSIPTGRLG
ERILVDELGHEIESRKRQRQK*
Coding >Pro_DTO377G3_2|g1127.t1
ATGTGGAAGAATACAAAACCGACCCATATTGCCTTCCAAGCACACAATCGACATGTCCTGACCTGTTTACAATTC
GACGCCGACAAGATTATAGTCGGTAGTGACAACGCCAAAATCAGCGTGTATGATACTAAGACCGGAGCGCTTCGA
GCAACACTGGAAGGCCACGAGGGTGGTATATGGGGACTTGAATACCATGGCAATACTCTGGTCTCTGTGTCGACT
GACCGATCCGTCCGAGTATGGGACATTGCAAAAGCCAAGTGCACCCACGTGTTCAAAGGTCACACATCCACAGTA
CGGACCGTACAGTTATTGCTCCCCGTTCAAATTGGCCAGCATCCAGACGGTACGCCAGTGATGATGCCTGAACAA
CCTCTAATAATTTCGGGGTCCCGTGATTCAACCATGCGGGTTTGGAAACTCCCTCAACCTGGCGACGAGGAGTAT
TTCCCTCCCGCTCAAAGTGACGAGGAGTGTCCGTATCTCATTCATGTATTGGCTGGCCATCAACACTCCGTGCGA
GCAACTGCAGCCCATGGGGATACCCTGGTTAGCGGTAGCTATGACAGTACCGTACGAGTTTGGAAAGTATCCACC
GGAGAATCACTGCACCGGCTAGAAGGTCATCGATACAAGGTTTATAATGTATCTTTGGACCATGAGAGGAACCGC
TGTATTAGTGGATCAATGGACAACATGGTCAAGATATGGTCTCTTGATACAGGTGCGTTGTTATATAATCTTGAA
GGCCACTCATCGTTAGTGGGCTTGCTTGATTTGAAAGATGATCTGCTCGTGTCGGCAGCTGCGGACAGTATGCTT
AAAGTCTGGAACCCTGCGAATGGCCATTGCCAGCACACGCTGAGTGGCCATACTTCAGCGGTCACAAGCTTCCAG
CACGATGGTCAAAAAGTAATCTCTGGTTCCGATGGGGAAGTGAAGTTGTGGGATATACAGACTGGTGTGTTTGAA
AGGGATCTTCTCACCAACCTTAGCGGTGTCTGGCAAGTCCAGTTTGATGCCCAGCGTTGCGTTGCAGCAGTTCAA
CGTGGGAATCTGAGCTATATCGAGATTCTCGACTTTGGCGCTTCCCCTGACTCCATACCAACTGGTCGGCTGGGG
GAGCGGATACTAGTCGATGAGCTAGGTCATGAGATCGAAAGCCGGAAGAGACAAAGGCAGAAATAA
Transcript >Pro_DTO377G3_2|g1127.t1
ATGTGGAAGAATACAAAACCGACCCATATTGCCTTCCAAGCACACAATCGACATGTCCTGACCTGTTTACAATTC
GACGCCGACAAGATTATAGTCGGTAGTGACAACGCCAAAATCAGCGTGTATGATACTAAGACCGGAGCGCTTCGA
GCAACACTGGAAGGCCACGAGGGTGGTATATGGGGACTTGAATACCATGGCAATACTCTGGTCTCTGTGTCGACT
GACCGATCCGTCCGAGTATGGGACATTGCAAAAGCCAAGTGCACCCACGTGTTCAAAGGTCACACATCCACAGTA
CGGACCGTACAGTTATTGCTCCCCGTTCAAATTGGCCAGCATCCAGACGGTACGCCAGTGATGATGCCTGAACAA
CCTCTAATAATTTCGGGGTCCCGTGATTCAACCATGCGGGTTTGGAAACTCCCTCAACCTGGCGACGAGGAGTAT
TTCCCTCCCGCTCAAAGTGACGAGGAGTGTCCGTATCTCATTCATGTATTGGCTGGCCATCAACACTCCGTGCGA
GCAACTGCAGCCCATGGGGATACCCTGGTTAGCGGTAGCTATGACAGTACCGTACGAGTTTGGAAAGTATCCACC
GGAGAATCACTGCACCGGCTAGAAGGTCATCGATACAAGGTTTATAATGTATCTTTGGACCATGAGAGGAACCGC
TGTATTAGTGGATCAATGGACAACATGGTCAAGATATGGTCTCTTGATACAGGTGCGTTGTTATATAATCTTGAA
GGCCACTCATCGTTAGTGGGCTTGCTTGATTTGAAAGATGATCTGCTCGTGTCGGCAGCTGCGGACAGTATGCTT
AAAGTCTGGAACCCTGCGAATGGCCATTGCCAGCACACGCTGAGTGGCCATACTTCAGCGGTCACAAGCTTCCAG
CACGATGGTCAAAAAGTAATCTCTGGTTCCGATGGGGAAGTGAAGTTGTGGGATATACAGACTGGTGTGTTTGAA
AGGGATCTTCTCACCAACCTTAGCGGTGTCTGGCAAGTCCAGTTTGATGCCCAGCGTTGCGTTGCAGCAGTTCAA
CGTGGGAATCTGAGCTATATCGAGATTCTCGACTTTGGCGCTTCCCCTGACTCCATACCAACTGGTCGGCTGGGG
GAGCGGATACTAGTCGATGAGCTAGGTCATGAGATCGAAAGCCGGAAGAGACAAAGGCAGAAATAA
Gene >Pro_DTO377G3_2|g1127.t1
ATGTGGAAGAATACAAAACCGACCCATATTGCCTTCCAAGCACACAATCGACATGTCCTGACCTGTTTACAATTC
GACGCCGACAAGATTATAGTCGGTAGTGACAACGCCAAAATCAGCGTGTATGATACTAAGACCGGAGCGCTTCGA
GCAACACTGGAAGGCCACGAGGGTGGTATATGGGGACTTGAATACCATGGCAATACTCTGGTCTCTGTGTCGACT
GACCGATCCGTCCGAGTATGGGACATTGCAAAAGCCAAGTGCACCCACGTGTTCAAAGGTCACACATCCACAGTA
CGGACCGTACAGTTATTGCTCCCCGTTCAAATTGGCCAGCATCCAGACGGTACGCCAGTGATGATGCCTGAACAA
CCTCTAATAATTTCGGGGTCCCGTGATTCAACCATGCGGGTTTGGAAACTCCCTCAACCTGGCGACGAGGAGTAT
TTCCCTCCCGCTCAAAGTGACGAGGAGTGTCCGTATCTCATTCATGTATTGGCTGGCCATCAACACTCCGTGCGA
GCAACTGCAGCCCATGGGGATACCCTGGTTAGCGGTAGCTATGACAGTACCGTACGAGTTTGGAAAGTATCCACC
GGAGAATCACTGCACCGGCTAGAAGGTCATCGATACAAGGTTTATAATGTATCTTTGGACCATGAGAGGAACCGC
TGTATTAGTGGATCAATGGACAACATGGTCAAGATATGGTCTCTTGATACAGGTGCGTTGTTATATAATCTTGAA
GGCCACTCATCGTTAGTGGGCTTGCTTGATTTGAAAGATGATCTGCTCGTGTCGGCAGCTGCGGACAGTATGCTT
AAAGTCTGGAACCCTGCGAATGGCCATTGCCAGCACACGCTGAGTGGCCATACTTCAGCGGTCACAAGCTTCCAG
CACGATGGTCAAAAAGTAATCTCTGGTTCCGATGGGGAAGTGAAGTTGTGGGATATACAGACTGGTGTGTTTGAA
AGGGATCTTCTCACCAACCTTAGCGGTGTCTGGCAAGTCCAGTTTGATGCCCAGCGTTGCGTTGCAGCAGTTCAA
CGTGGGAATCTGAGCTATATCGAGGTAAGTACTCATCTAAACTGATGTGCTGTCATAATTTGCTGATTTATGAAG
ATTCTCGACTTTGGCGCTTCCCCTGACTCCATACCAACTGGTCGGCTGGGGGAGCGGATACTAGTCGATGAGCTA
GGTCATGAGATCGAAAGCCGGAAGAGACAAAGGCAGAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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