Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1108.t1
Gene name
Locationscaffold_01:2931032..2932526
Strand+
Gene length (bp)1494
Transcript length (bp)1314
Coding sequence length (bp)1314
Protein length (aa) 438

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 2.6E-77 19 411
PF00187 Chitin_bind_1 Chitin recognition protein 4.5E-07 305 338

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0008061 chitin binding Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0097367 carbohydrate derivative binding No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No
GO:0008144 drug binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1108.t1
MLKRLALGLLAAQSVAATRFAMYIDEYHVTALPGQNQTEGIDYAIMSFAASKLFNSDSPAAYKPFESPETMRKRF
SSGTKLMVAIGGWGDTAGFSEGAKDAASRTRYAKNVASMLDANGFDGVDIDWEYPGGNGQDYKDVPNSKKVDEIE
TYPLFLEAVRKAIGNKTLSIAVPGRKQDFIAFTKEQGPKIFKSVDMVNVMSYDLINRRDNVTGHASGVQGSLDTI
NEYIAIGADPAKLNLGFAYYAKWFTTDPNSDCDENPLGCHLAKLENDDGTDNGKSGAMTFEASTAAAAPKDLKQS
TDGLCGFGAKAKCPSGQCCSSSGYCGTGDDFCQAGCLSDYGTCKGISITDSWRKAQKDGKTDEKGGGQYYFDSDN
NLFWTWDTPELIARKFKEIVAEKKLGGVMAWSLGEDTYKFEHLEAMQKGLKSHSPKVAEPPQ*
Coding >Pro_DTO377G3_2|g1108.t1
ATGTTAAAACGACTCGCACTTGGCCTGCTGGCCGCTCAGTCCGTGGCTGCCACGCGCTTTGCCATGTACATCGAC
GAATACCATGTAACCGCTCTGCCGGGCCAGAACCAGACCGAGGGTATCGACTATGCAATTATGAGCTTCGCTGCC
TCGAAGCTATTCAACTCAGACTCGCCCGCAGCATACAAGCCATTTGAGTCGCCCGAGACCATGCGCAAGCGCTTC
AGCTCCGGTACCAAGCTAATGGTCGCTATTGGCGGCTGGGGCGACACCGCTGGCTTCTCTGAGGGAGCAAAGGAT
GCGGCTTCGCGCACGCGATATGCCAAGAATGTCGCTTCCATGCTCGACGCAAATGGATTCGACGGTGTCGACATT
GACTGGGAATACCCTGGCGGTAACGGCCAAGACTACAAAGACGTGCCCAACTCGAAGAAAGTGGACGAAATCGAA
ACCTACCCTCTTTTCCTCGAAGCTGTCCGCAAAGCAATCGGCAACAAGACCCTCTCTATTGCAGTGCCCGGCCGT
AAGCAGGACTTCATTGCCTTCACTAAGGAGCAGGGTCCTAAGATCTTCAAGTCTGTCGATATGGTCAATGTCATG
TCCTATGATCTGATTAACCGCCGTGATAACGTTACCGGCCACGCTAGCGGTGTCCAGGGATCCTTGGATACCATT
AACGAGTATATCGCCATCGGGGCTGATCCTGCAAAGCTCAACCTTGGCTTCGCGTACTACGCGAAGTGGTTTACC
ACCGACCCCAATTCCGATTGTGATGAGAACCCTCTCGGCTGCCATCTTGCCAAGCTCGAAAACGACGATGGAACA
GACAATGGCAAGTCTGGTGCTATGACTTTCGAAGCTAGTACTGCTGCCGCTGCGCCTAAGGATCTGAAGCAAAGC
ACCGATGGATTGTGCGGATTTGGAGCGAAGGCCAAGTGCCCATCGGGACAGTGCTGCAGTTCTTCCGGCTACTGC
GGTACTGGCGATGATTTCTGTCAGGCTGGGTGTCTCTCAGACTACGGTACCTGCAAGGGCATCTCCATCACCGAC
TCATGGCGCAAAGCCCAGAAGGACGGCAAGACCGACGAGAAGGGTGGTGGTCAGTACTACTTTGACAGCGATAAT
AATCTCTTCTGGACCTGGGATACACCCGAGTTGATTGCCCGCAAGTTCAAGGAAATTGTCGCGGAGAAGAAGCTT
GGTGGTGTCATGGCTTGGAGCTTGGGCGAGGATACCTACAAGTTCGAGCACTTGGAGGCTATGCAGAAGGGTCTC
AAGTCTCACTCTCCCAAAGTCGCGGAGCCCCCCCAATGA
Transcript >Pro_DTO377G3_2|g1108.t1
ATGTTAAAACGACTCGCACTTGGCCTGCTGGCCGCTCAGTCCGTGGCTGCCACGCGCTTTGCCATGTACATCGAC
GAATACCATGTAACCGCTCTGCCGGGCCAGAACCAGACCGAGGGTATCGACTATGCAATTATGAGCTTCGCTGCC
TCGAAGCTATTCAACTCAGACTCGCCCGCAGCATACAAGCCATTTGAGTCGCCCGAGACCATGCGCAAGCGCTTC
AGCTCCGGTACCAAGCTAATGGTCGCTATTGGCGGCTGGGGCGACACCGCTGGCTTCTCTGAGGGAGCAAAGGAT
GCGGCTTCGCGCACGCGATATGCCAAGAATGTCGCTTCCATGCTCGACGCAAATGGATTCGACGGTGTCGACATT
GACTGGGAATACCCTGGCGGTAACGGCCAAGACTACAAAGACGTGCCCAACTCGAAGAAAGTGGACGAAATCGAA
ACCTACCCTCTTTTCCTCGAAGCTGTCCGCAAAGCAATCGGCAACAAGACCCTCTCTATTGCAGTGCCCGGCCGT
AAGCAGGACTTCATTGCCTTCACTAAGGAGCAGGGTCCTAAGATCTTCAAGTCTGTCGATATGGTCAATGTCATG
TCCTATGATCTGATTAACCGCCGTGATAACGTTACCGGCCACGCTAGCGGTGTCCAGGGATCCTTGGATACCATT
AACGAGTATATCGCCATCGGGGCTGATCCTGCAAAGCTCAACCTTGGCTTCGCGTACTACGCGAAGTGGTTTACC
ACCGACCCCAATTCCGATTGTGATGAGAACCCTCTCGGCTGCCATCTTGCCAAGCTCGAAAACGACGATGGAACA
GACAATGGCAAGTCTGGTGCTATGACTTTCGAAGCTAGTACTGCTGCCGCTGCGCCTAAGGATCTGAAGCAAAGC
ACCGATGGATTGTGCGGATTTGGAGCGAAGGCCAAGTGCCCATCGGGACAGTGCTGCAGTTCTTCCGGCTACTGC
GGTACTGGCGATGATTTCTGTCAGGCTGGGTGTCTCTCAGACTACGGTACCTGCAAGGGCATCTCCATCACCGAC
TCATGGCGCAAAGCCCAGAAGGACGGCAAGACCGACGAGAAGGGTGGTGGTCAGTACTACTTTGACAGCGATAAT
AATCTCTTCTGGACCTGGGATACACCCGAGTTGATTGCCCGCAAGTTCAAGGAAATTGTCGCGGAGAAGAAGCTT
GGTGGTGTCATGGCTTGGAGCTTGGGCGAGGATACCTACAAGTTCGAGCACTTGGAGGCTATGCAGAAGGGTCTC
AAGTCTCACTCTCCCAAAGTCGCGGAGCCCCCCCAATGA
Gene >Pro_DTO377G3_2|g1108.t1
ATGTTAAAACGACTCGCACTTGGCCTGCTGGCCGCTCAGTCCGTGGCTGCCACGCGCTTTGCCATGTACATCGAC
GAGTTAGTACAAACTTGCGGAATTGATCTACATACCCTGAACCCACAGCTAATACTTGCCCAAGATACCATGTAA
CCGCTCTGCCGGGCCAGAACCAGACCGAGGGTATCGACTATGCAATTATGAGCTTCGCTGCCTCGAAGCTATTCA
ACTCAGACTCGCCCGCAGCATACAAGCCATTTGAGTCGCCCGAGACCATGCGCAAGCGCTTCAGCTCCGGTACCA
AGCTAATGGTCGCTATTGGCGGCTGGGGCGACACCGCTGGCTTCTCTGAGGGAGCAAAGGATGCGGCTTCGCGCA
CGCGATATGCCAAGAATGTCGCTTCCATGCTCGACGCAAATGGATTCGACGGTGTCGGTAAGATATCCCAACAAT
GCGTTCTGGATATAAAAGAAGAAGCAAGGTACTAACCTATATGAACAGACATTGACTGGGAATACCCTGGCGGTA
ACGGCCAAGACTACAAAGACGTGCCCAACTCGAAGAAAGTGGACGAAATCGAAACCTACCCTCTTTTCCTCGAAG
CTGTCCGCAAAGCAATCGGCAACAAGACCCTCTCTATTGCAGTGCCCGGCCGTAAGCAGGACTTCATTGCCTTCA
CTAAGGAGCAGGGTCCTAAGATCTTCAAGTCTGTCGATATGGTCAATGTCATGTCCTATGATCTGATTAACCGCC
GTGATAACGTTACCGGCCACGCTAGCGGTGTCCAGGGATCCTTGGATACCATTAACGAGTATATCGCCATCGGGG
CTGATCCTGCAAAGCTCAACCTTGGCTTCGCGTACTACGCGAAGTGGTTTACCACCGACCCCAATTCCGATTGTG
ATGAGAACCCTCTCGGCTGCCATCTTGCCAAGCTCGAAAACGACGATGGAACAGACAATGGCAAGTCTGGTGCTA
TGACTTTCGAAGCTAGTACTGCTGCCGCTGCGCCTAAGGATCTGAAGCAAAGCACCGATGGATTGTGCGGATTTG
GAGCGAAGGCCAAGTGCCCATCGGGACAGTGCTGCAGTTCTTCCGGCTACTGGTATGCATAACATCATTTAATTC
TGATCAGTATCTAGACTAACCCCTTACAGCGGTACTGGCGATGATTTCTGTCAGGCTGGGTGTCTCTCAGACTAC
GGTACCTGCAAGGGCATCTCCATCACCGACTCATGGCGCAAAGCCCAGAAGGACGGCAAGACCGACGAGAAGGGT
GGTGGTCAGTACTACTTTGACAGCGATAATAATCTCTTCTGGACCTGGGATACACCCGAGTTGATTGCCCGCAAG
TTCAAGGAAATTGTCGCGGAGAAGAAGCTTGGTGGTGTCATGGCTTGGAGCTTGGGCGAGGATACCTACAAGTTC
GAGCACTTGGAGGCTATGCAGAAGGGTCTCAAGTCTCACTCTCCCAAAGTCGCGGAGCCCCCCCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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