Protein ID | Pro_DTO377G3_2|g1077.t1 |
Gene name | |
Location | scaffold_01:2856982..2858064 |
Strand | + |
Gene length (bp) | 1082 |
Transcript length (bp) | 921 |
Coding sequence length (bp) | 921 |
Protein length (aa) | 307 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02630 | SCO1-SenC | SCO1/SenC | 1.8E-45 | 134 | 272 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 89 | 111 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1077.t1 MPSPIRLANGLLTRATRNITLESASTQRILPLLRSNTAPQCRAYTQAQRPRCDQNMRAMVSTQNKFSTSAFRAGP KTMGQMRQRNSTGPFSWKAALLFVLTGAGMMLYFRVEKARLERKRMTEMSKGVGKPKVGGPFVLKDLDGKEFTAE DLKGKYSFVYFGFTHCPDICPDELDKMAEIIEKVKAATGDEKIFMPVFITCDPVRDTPEVLREYLKEFHTGIVGL TGTYDQIKHVCKQYRVYFSTPRDVKPGEDYLVDHSIYFYLMDPDNDFVECIGRQDTPESASKVILEHINDWKREG KPLKTE* |
Coding | >Pro_DTO377G3_2|g1077.t1 ATGCCTTCTCCTATAAGATTGGCCAATGGGCTCCTAACCCGAGCCACCCGCAATATCACCCTCGAATCCGCCTCA ACACAACGCATCCTCCCTCTCCTCCGAAGCAACACCGCACCACAATGCAGAGCCTACACCCAAGCACAGCGTCCA CGATGCGACCAAAACATGCGCGCCATGGTCTCCACACAGAACAAATTCTCAACCTCCGCCTTCCGAGCAGGCCCC AAGACAATGGGCCAGATGCGCCAGCGCAACTCGACCGGCCCGTTCTCGTGGAAGGCCGCACTGCTCTTCGTCTTG ACCGGCGCCGGCATGATGCTGTACTTCCGTGTTGAGAAAGCGCGTCTGGAGCGCAAGCGCATGACGGAGATGAGC AAGGGCGTTGGCAAGCCGAAGGTTGGCGGTCCGTTCGTGTTGAAGGATCTTGATGGGAAGGAGTTTACGGCGGAG GACTTGAAGGGCAAATACAGCTTTGTCTACTTCGGCTTCACTCACTGCCCTGATATCTGCCCCGACGAGCTGGAC AAGATGGCCGAGATTATCGAGAAGGTCAAGGCTGCTACCGGGGATGAGAAGATCTTCATGCCCGTTTTCATCACC TGCGATCCCGTCCGTGATACGCCTGAGGTGCTGCGCGAGTATCTGAAGGAGTTCCACACTGGCATCGTTGGCTTG ACTGGCACCTACGATCAGATCAAGCACGTGTGCAAGCAGTACCGTGTGTACTTTAGTACTCCCCGGGATGTGAAG CCCGGCGAGGATTACCTCGTGGACCACAGTATCTACTTTTATCTGATGGACCCCGACAATGACTTCGTCGAGTGT ATCGGCCGACAGGATACCCCCGAGTCTGCATCCAAGGTGATCCTGGAGCACATCAATGACTGGAAGAGAGAGGGG AAGCCACTCAAGACGGAGTAA |
Transcript | >Pro_DTO377G3_2|g1077.t1 ATGCCTTCTCCTATAAGATTGGCCAATGGGCTCCTAACCCGAGCCACCCGCAATATCACCCTCGAATCCGCCTCA ACACAACGCATCCTCCCTCTCCTCCGAAGCAACACCGCACCACAATGCAGAGCCTACACCCAAGCACAGCGTCCA CGATGCGACCAAAACATGCGCGCCATGGTCTCCACACAGAACAAATTCTCAACCTCCGCCTTCCGAGCAGGCCCC AAGACAATGGGCCAGATGCGCCAGCGCAACTCGACCGGCCCGTTCTCGTGGAAGGCCGCACTGCTCTTCGTCTTG ACCGGCGCCGGCATGATGCTGTACTTCCGTGTTGAGAAAGCGCGTCTGGAGCGCAAGCGCATGACGGAGATGAGC AAGGGCGTTGGCAAGCCGAAGGTTGGCGGTCCGTTCGTGTTGAAGGATCTTGATGGGAAGGAGTTTACGGCGGAG GACTTGAAGGGCAAATACAGCTTTGTCTACTTCGGCTTCACTCACTGCCCTGATATCTGCCCCGACGAGCTGGAC AAGATGGCCGAGATTATCGAGAAGGTCAAGGCTGCTACCGGGGATGAGAAGATCTTCATGCCCGTTTTCATCACC TGCGATCCCGTCCGTGATACGCCTGAGGTGCTGCGCGAGTATCTGAAGGAGTTCCACACTGGCATCGTTGGCTTG ACTGGCACCTACGATCAGATCAAGCACGTGTGCAAGCAGTACCGTGTGTACTTTAGTACTCCCCGGGATGTGAAG CCCGGCGAGGATTACCTCGTGGACCACAGTATCTACTTTTATCTGATGGACCCCGACAATGACTTCGTCGAGTGT ATCGGCCGACAGGATACCCCCGAGTCTGCATCCAAGGTGATCCTGGAGCACATCAATGACTGGAAGAGAGAGGGG AAGCCACTCAAGACGGAGTAA |
Gene | >Pro_DTO377G3_2|g1077.t1 ATGCCTTCTCCTATAAGATTGGCCAATGGGCTCCTAACCCGAGCCACCCGCAATATCACCCTCGAATCCGCCTCA ACACAACGCATCCTCCCTCTCCTCCGAAGCAACACCGCACCACAATGCAGAGCCTACACCCAAGCACAGCGTCCA CGATGCGACCAAAACATGCGCGCCATGGTCTCCACACAGAACAAATTCTCAACCTCCGCCTTCCGAGCAGGCCCC AAGACAATGGGCCAGATGCGCCAGCGCAACTCGACCGGCCCGTTCTCGTGGAAGGCCGCACTGCTCTTCGTCTTG ACCGGCGCCGGCATGATGCTGTACTTCCGTGTTGAGAAAGCGCGTCTGGAGCGCAAGCGCATGACGGAGATGAGC AAGGGCGTTGGCAAGCCGAAGGTTGGCGGTCCGTTCGTGTTGAAGGATCTTGATGGGAAGGAGTTTACGGCGGAG GACTTGAAGGGCAAATACAGCTTTGTGAGTTGATCCGGAGGATGGAATAGAGAGCATCAATGGATTCAATGGATT CAATGGATTTGACATGTTGGAACGGTACTCGCTAACACGATCTCGCTTTATTTCTTCAGGTCTACTTCGGCTTCA CTCACTGCCCTGATATCTGCCCCGACGAGCTGGACAAGATGGCCGAGATTATCGAGAAGGTCAAGGCTGCTACCG GGGATGAGAAGATCTTCATGCCCGTTTTCATCACCTGCGATCCCGTCCGTGATACGCCTGAGGTGCTGCGCGAGT ATCTGAAGGAGTTCCACACTGGCATCGTTGGCTTGACTGGCACCTACGATCAGATCAAGCACGTGTGCAAGCAGT ACCGTGTGTACTTTAGTACTCCCCGGGATGTGAAGCCCGGCGAGGATTACCTCGTGGACCACAGTATCTACTTTT ATCTGATGGGTGAGTGCTGATAAGACCTTATACATAAACGTATGCTAACCTTTATCATAGACCCCGACAATGACT TCGTCGAGTGTATCGGCCGACAGGATACCCCCGAGTCTGCATCCAAGGTGATCCTGGAGCACATCAATGACTGGA AGAGAGAGGGGAAGCCACTCAAGACGGAGTAA |