Protein ID | Pro_DTO377G3_2|g1075.t1 |
Gene name | |
Location | scaffold_01:2852561..2854139 |
Strand | + |
Gene length (bp) | 1578 |
Transcript length (bp) | 1578 |
Coding sequence length (bp) | 1578 |
Protein length (aa) | 526 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01494 | FAD_binding_3 | FAD binding domain | 4.2E-82 | 4 | 358 |
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.5E-04 | 9 | 40 |
PF08491 | SE | Squalene epoxidase | 1.8E-04 | 160 | 370 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004506 | squalene monooxygenase activity | Yes |
GO:0050660 | flavin adenine dinucleotide binding | Yes |
GO:0071949 | FAD binding | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0036094 | small molecule binding | No |
GO:0003824 | catalytic activity | No |
GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | No |
GO:0043167 | ion binding | No |
GO:0005575 | cellular_component | No |
GO:0004497 | monooxygenase activity | No |
GO:0000166 | nucleotide binding | No |
GO:0005488 | binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0003674 | molecular_function | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0016491 | oxidoreductase activity | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043168 | anion binding | No |
GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 24 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1075.t1 MKPKTDVLIVGAGPTGLVLALWLHHQGVNVHIFDQAEAPAQNSRAIIVHARIVELYRQLGLSEDLLKLGYKLPAT NLWVYRQRKAHVPLEDFGRDLTPYPFMLSVPQDDHERMLEKRLNDVGIHVERGSKLQGFVDHGSSITATLFRESD GSSTTHEASYIVGCDGAHSVVRHGIGAKFEGETYKPLFYIADVEGKSEKHFNGEGNVVFTNDTFNLVVPYNKAGH VRLVGIIMPDENDNDNSESLVHQHQITFDDVRPQIMQAMDIDITKVNWFSTYRSHHRVADKFRSNRAFLVGDAAH IHSPVGGQGMNTGIMDAINLAWKLATVLKQTNMSEDAQNQLLDSYENERRSFAMMIVKSTDAGFTTLTSKGIFPH ILRNWLIPYLVPLLLKLDFARTRIFRGASQLVCHYRGSSLSQTGEGAVQPGDRLPWAAINEVDNFSTLREVCWQL HIYGESLPQIEKWAQQTSVKVFVFPWQDQYANAGLIENAVYLLRPDQYIAGIFKDPSVEGLNEYFATRGLYLGRD * |
Coding | >Pro_DTO377G3_2|g1075.t1 ATGAAACCCAAAACGGATGTTCTCATTGTCGGCGCAGGCCCAACTGGCCTTGTCCTTGCTCTGTGGCTTCACCAT CAAGGTGTCAATGTCCACATTTTCGACCAGGCGGAGGCCCCGGCGCAGAACTCCCGAGCGATCATTGTCCATGCG CGCATAGTCGAGCTGTATAGACAACTTGGATTGAGCGAAGACTTGCTGAAACTTGGGTACAAGCTGCCGGCCACG AATCTCTGGGTTTATAGGCAGCGCAAAGCGCACGTCCCGCTGGAAGACTTCGGTCGCGATTTGACTCCGTACCCG TTCATGCTCAGCGTACCGCAAGACGACCACGAAAGGATGCTCGAAAAGCGACTGAATGACGTGGGCATCCATGTC GAGCGAGGGTCGAAGTTGCAAGGCTTTGTGGACCACGGGTCTAGCATCACTGCCACCTTGTTCCGCGAATCTGAT GGCAGCTCAACCACACACGAAGCATCGTACATAGTGGGCTGTGATGGGGCGCACTCGGTTGTTCGCCACGGGATT GGTGCCAAATTCGAGGGCGAAACGTACAAACCGCTGTTCTATATCGCCGACGTCGAAGGCAAAAGCGAGAAGCAT TTCAACGGCGAAGGGAACGTGGTGTTCACCAACGACACTTTCAACCTGGTTGTCCCGTACAACAAAGCCGGCCAT GTGCGATTGGTTGGTATTATCATGCCGGATGAAAACGACAATGACAACTCTGAATCGCTAGTGCATCAGCACCAG ATCACGTTCGACGACGTTCGACCCCAGATCATGCAAGCCATGGATATCGATATCACCAAGGTCAACTGGTTCTCC ACCTATCGCAGTCACCACCGTGTGGCCGACAAATTCCGCAGCAATCGGGCATTCCTTGTTGGGGATGCGGCTCAC ATCCACAGCCCAGTCGGCGGGCAGGGCATGAATACCGGTATCATGGACGCGATCAATTTGGCGTGGAAGCTCGCA ACGGTCCTAAAGCAGACAAACATGAGCGAGGATGCACAAAACCAGCTTTTGGATTCATATGAGAACGAACGCCGC TCATTCGCTATGATGATAGTCAAGTCCACCGACGCGGGCTTTACCACATTGACGTCAAAAGGAATCTTCCCACAC ATTCTTCGAAATTGGCTGATTCCGTACCTTGTGCCACTGCTCTTGAAACTTGATTTTGCCCGGACTAGAATCTTC CGCGGTGCTTCTCAGCTCGTTTGCCACTATAGGGGCAGCAGTCTTTCTCAGACTGGAGAAGGGGCCGTGCAGCCT GGCGACCGTCTCCCATGGGCTGCAATCAACGAGGTGGATAACTTTTCAACTCTGCGAGAAGTCTGTTGGCAGCTC CATATCTATGGCGAATCCCTACCACAAATTGAAAAGTGGGCCCAACAGACGAGTGTGAAGGTCTTCGTCTTTCCC TGGCAGGATCAATATGCCAATGCTGGGCTGATCGAGAATGCCGTTTACTTGCTGCGACCTGATCAGTACATTGCA GGGATTTTCAAGGACCCCTCTGTTGAGGGGCTGAACGAGTACTTTGCTACTCGGGGGTTGTACCTAGGTCGAGAC TAG |
Transcript | >Pro_DTO377G3_2|g1075.t1 ATGAAACCCAAAACGGATGTTCTCATTGTCGGCGCAGGCCCAACTGGCCTTGTCCTTGCTCTGTGGCTTCACCAT CAAGGTGTCAATGTCCACATTTTCGACCAGGCGGAGGCCCCGGCGCAGAACTCCCGAGCGATCATTGTCCATGCG CGCATAGTCGAGCTGTATAGACAACTTGGATTGAGCGAAGACTTGCTGAAACTTGGGTACAAGCTGCCGGCCACG AATCTCTGGGTTTATAGGCAGCGCAAAGCGCACGTCCCGCTGGAAGACTTCGGTCGCGATTTGACTCCGTACCCG TTCATGCTCAGCGTACCGCAAGACGACCACGAAAGGATGCTCGAAAAGCGACTGAATGACGTGGGCATCCATGTC GAGCGAGGGTCGAAGTTGCAAGGCTTTGTGGACCACGGGTCTAGCATCACTGCCACCTTGTTCCGCGAATCTGAT GGCAGCTCAACCACACACGAAGCATCGTACATAGTGGGCTGTGATGGGGCGCACTCGGTTGTTCGCCACGGGATT GGTGCCAAATTCGAGGGCGAAACGTACAAACCGCTGTTCTATATCGCCGACGTCGAAGGCAAAAGCGAGAAGCAT TTCAACGGCGAAGGGAACGTGGTGTTCACCAACGACACTTTCAACCTGGTTGTCCCGTACAACAAAGCCGGCCAT GTGCGATTGGTTGGTATTATCATGCCGGATGAAAACGACAATGACAACTCTGAATCGCTAGTGCATCAGCACCAG ATCACGTTCGACGACGTTCGACCCCAGATCATGCAAGCCATGGATATCGATATCACCAAGGTCAACTGGTTCTCC ACCTATCGCAGTCACCACCGTGTGGCCGACAAATTCCGCAGCAATCGGGCATTCCTTGTTGGGGATGCGGCTCAC ATCCACAGCCCAGTCGGCGGGCAGGGCATGAATACCGGTATCATGGACGCGATCAATTTGGCGTGGAAGCTCGCA ACGGTCCTAAAGCAGACAAACATGAGCGAGGATGCACAAAACCAGCTTTTGGATTCATATGAGAACGAACGCCGC TCATTCGCTATGATGATAGTCAAGTCCACCGACGCGGGCTTTACCACATTGACGTCAAAAGGAATCTTCCCACAC ATTCTTCGAAATTGGCTGATTCCGTACCTTGTGCCACTGCTCTTGAAACTTGATTTTGCCCGGACTAGAATCTTC CGCGGTGCTTCTCAGCTCGTTTGCCACTATAGGGGCAGCAGTCTTTCTCAGACTGGAGAAGGGGCCGTGCAGCCT GGCGACCGTCTCCCATGGGCTGCAATCAACGAGGTGGATAACTTTTCAACTCTGCGAGAAGTCTGTTGGCAGCTC CATATCTATGGCGAATCCCTACCACAAATTGAAAAGTGGGCCCAACAGACGAGTGTGAAGGTCTTCGTCTTTCCC TGGCAGGATCAATATGCCAATGCTGGGCTGATCGAGAATGCCGTTTACTTGCTGCGACCTGATCAGTACATTGCA GGGATTTTCAAGGACCCCTCTGTTGAGGGGCTGAACGAGTACTTTGCTACTCGGGGGTTGTACCTAGGTCGAGAC TAG |
Gene | >Pro_DTO377G3_2|g1075.t1 ATGAAACCCAAAACGGATGTTCTCATTGTCGGCGCAGGCCCAACTGGCCTTGTCCTTGCTCTGTGGCTTCACCAT CAAGGTGTCAATGTCCACATTTTCGACCAGGCGGAGGCCCCGGCGCAGAACTCCCGAGCGATCATTGTCCATGCG CGCATAGTCGAGCTGTATAGACAACTTGGATTGAGCGAAGACTTGCTGAAACTTGGGTACAAGCTGCCGGCCACG AATCTCTGGGTTTATAGGCAGCGCAAAGCGCACGTCCCGCTGGAAGACTTCGGTCGCGATTTGACTCCGTACCCG TTCATGCTCAGCGTACCGCAAGACGACCACGAAAGGATGCTCGAAAAGCGACTGAATGACGTGGGCATCCATGTC GAGCGAGGGTCGAAGTTGCAAGGCTTTGTGGACCACGGGTCTAGCATCACTGCCACCTTGTTCCGCGAATCTGAT GGCAGCTCAACCACACACGAAGCATCGTACATAGTGGGCTGTGATGGGGCGCACTCGGTTGTTCGCCACGGGATT GGTGCCAAATTCGAGGGCGAAACGTACAAACCGCTGTTCTATATCGCCGACGTCGAAGGCAAAAGCGAGAAGCAT TTCAACGGCGAAGGGAACGTGGTGTTCACCAACGACACTTTCAACCTGGTTGTCCCGTACAACAAAGCCGGCCAT GTGCGATTGGTTGGTATTATCATGCCGGATGAAAACGACAATGACAACTCTGAATCGCTAGTGCATCAGCACCAG ATCACGTTCGACGACGTTCGACCCCAGATCATGCAAGCCATGGATATCGATATCACCAAGGTCAACTGGTTCTCC ACCTATCGCAGTCACCACCGTGTGGCCGACAAATTCCGCAGCAATCGGGCATTCCTTGTTGGGGATGCGGCTCAC ATCCACAGCCCAGTCGGCGGGCAGGGCATGAATACCGGTATCATGGACGCGATCAATTTGGCGTGGAAGCTCGCA ACGGTCCTAAAGCAGACAAACATGAGCGAGGATGCACAAAACCAGCTTTTGGATTCATATGAGAACGAACGCCGC TCATTCGCTATGATGATAGTCAAGTCCACCGACGCGGGCTTTACCACATTGACGTCAAAAGGAATCTTCCCACAC ATTCTTCGAAATTGGCTGATTCCGTACCTTGTGCCACTGCTCTTGAAACTTGATTTTGCCCGGACTAGAATCTTC CGCGGTGCTTCTCAGCTCGTTTGCCACTATAGGGGCAGCAGTCTTTCTCAGACTGGAGAAGGGGCCGTGCAGCCT GGCGACCGTCTCCCATGGGCTGCAATCAACGAGGTGGATAACTTTTCAACTCTGCGAGAAGTCTGTTGGCAGCTC CATATCTATGGCGAATCCCTACCACAAATTGAAAAGTGGGCCCAACAGACGAGTGTGAAGGTCTTCGTCTTTCCC TGGCAGGATCAATATGCCAATGCTGGGCTGATCGAGAATGCCGTTTACTTGCTGCGACCTGATCAGTACATTGCA GGGATTTTCAAGGACCCCTCTGTTGAGGGGCTGAACGAGTACTTTGCTACTCGGGGGTTGTACCTAGGTCGAGAC TAG |