Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1075.t1
Gene name
Locationscaffold_01:2852561..2854139
Strand+
Gene length (bp)1578
Transcript length (bp)1578
Coding sequence length (bp)1578
Protein length (aa) 526

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01494 FAD_binding_3 FAD binding domain 3.8E-82 4 358
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 1.2E-04 9 42
PF08491 SE Squalene epoxidase 1.6E-04 160 370

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0004506 squalene monooxygenase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0071949 FAD binding Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:1901363 heterocyclic compound binding No
GO:0004497 monooxygenase activity No
GO:0097159 organic cyclic compound binding No
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen No
GO:0003824 catalytic activity No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0036094 small molecule binding No
GO:0016491 oxidoreductase activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:0044425 membrane part No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1075.t1
MKPKTDVLIVGAGPTGLVLALWLHHQGVNVHIFDQAEAPAQNSRAIIVHARIVELYRQLGLSEDLLKLGYKLPAT
NLWVYRQRKAHVPLEDFGRDLTPYPFMLSVPQDDHERMLEKRLNDVGIHVERGSKLQGFVDHGSSITATLFRESD
GSSTTHEASYIVGCDGAHSVVRHGIGAKFEGETYKPLFYIADVEGKSEKHFNGEGNVVFTNDTFNLVVPYNKAGH
VRLVGIIMPDENDNDNSESLVHQHQITFDDVRPQIMQAMDIDITKVNWFSTYRSHHRVADKFRSNRAFLVGDAAH
IHSPVGGQGMNTGIMDAINLAWKLATVLKQTNMSEDAQNQLLDSYENERRSFAMMIVKSTDAGFTTLTSKGIFPH
ILRNWLIPYLVPLLLKLDFARTRIFRGASQLVCHYRGSSLSQTGEGAVQPGDRLPWAAINEVDNFSTLREVCWQL
HIYGESLPQIEKWAQQTSVKVFVFPWQDQYANAGLIENAVYLLRPDQYIAGIFKDPSVEGLNEYFATRGLYLGRD
*
Coding >Pro_DTO377G3_2|g1075.t1
ATGAAACCCAAAACGGATGTTCTCATTGTCGGCGCAGGCCCAACTGGCCTTGTCCTTGCTCTGTGGCTTCACCAT
CAAGGTGTCAATGTCCACATTTTCGACCAGGCGGAGGCCCCGGCGCAGAACTCCCGAGCGATCATTGTCCATGCG
CGCATAGTCGAGCTGTATAGACAACTTGGATTGAGCGAAGACTTGCTGAAACTTGGGTACAAGCTGCCGGCCACG
AATCTCTGGGTTTATAGGCAGCGCAAAGCGCACGTCCCGCTGGAAGACTTCGGTCGCGATTTGACTCCGTACCCG
TTCATGCTCAGCGTACCGCAAGACGACCACGAAAGGATGCTCGAAAAGCGACTGAATGACGTGGGCATCCATGTC
GAGCGAGGGTCGAAGTTGCAAGGCTTTGTGGACCACGGGTCTAGCATCACTGCCACCTTGTTCCGCGAATCTGAT
GGCAGCTCAACCACACACGAAGCATCGTACATAGTGGGCTGTGATGGGGCGCACTCGGTTGTTCGCCACGGGATT
GGTGCCAAATTCGAGGGCGAAACGTACAAACCGCTGTTCTATATCGCCGACGTCGAAGGCAAAAGCGAGAAGCAT
TTCAACGGCGAAGGGAACGTGGTGTTCACCAACGACACTTTCAACCTGGTTGTCCCGTACAACAAAGCCGGCCAT
GTGCGATTGGTTGGTATTATCATGCCGGATGAAAACGACAATGACAACTCTGAATCGCTAGTGCATCAGCACCAG
ATCACGTTCGACGACGTTCGACCCCAGATCATGCAAGCCATGGATATCGATATCACCAAGGTCAACTGGTTCTCC
ACCTATCGCAGTCACCACCGTGTGGCCGACAAATTCCGCAGCAATCGGGCATTCCTTGTTGGGGATGCGGCTCAC
ATCCACAGCCCAGTCGGCGGGCAGGGCATGAATACCGGTATCATGGACGCGATCAATTTGGCGTGGAAGCTCGCA
ACGGTCCTAAAGCAGACAAACATGAGCGAGGATGCACAAAACCAGCTTTTGGATTCATATGAGAACGAACGCCGC
TCATTCGCTATGATGATAGTCAAGTCCACCGACGCGGGCTTTACCACATTGACGTCAAAAGGAATCTTCCCACAC
ATTCTTCGAAATTGGCTGATTCCGTACCTTGTGCCACTGCTCTTGAAACTTGATTTTGCCCGGACTAGAATCTTC
CGCGGTGCTTCTCAGCTCGTTTGCCACTATAGGGGCAGCAGTCTTTCTCAGACTGGAGAAGGGGCCGTGCAGCCT
GGCGACCGTCTCCCATGGGCTGCAATCAACGAGGTGGATAACTTTTCAACTCTGCGAGAAGTCTGTTGGCAGCTC
CATATCTATGGCGAATCCCTACCACAAATTGAAAAGTGGGCCCAACAGACGAGTGTGAAGGTCTTCGTCTTTCCC
TGGCAGGATCAATATGCCAATGCTGGGCTGATCGAGAATGCCGTTTACTTGCTGCGACCTGATCAGTACATTGCA
GGGATTTTCAAGGACCCCTCTGTTGAGGGGCTGAACGAGTACTTTGCTACTCGGGGGTTGTACCTAGGTCGAGAC
TAG
Transcript >Pro_DTO377G3_2|g1075.t1
ATGAAACCCAAAACGGATGTTCTCATTGTCGGCGCAGGCCCAACTGGCCTTGTCCTTGCTCTGTGGCTTCACCAT
CAAGGTGTCAATGTCCACATTTTCGACCAGGCGGAGGCCCCGGCGCAGAACTCCCGAGCGATCATTGTCCATGCG
CGCATAGTCGAGCTGTATAGACAACTTGGATTGAGCGAAGACTTGCTGAAACTTGGGTACAAGCTGCCGGCCACG
AATCTCTGGGTTTATAGGCAGCGCAAAGCGCACGTCCCGCTGGAAGACTTCGGTCGCGATTTGACTCCGTACCCG
TTCATGCTCAGCGTACCGCAAGACGACCACGAAAGGATGCTCGAAAAGCGACTGAATGACGTGGGCATCCATGTC
GAGCGAGGGTCGAAGTTGCAAGGCTTTGTGGACCACGGGTCTAGCATCACTGCCACCTTGTTCCGCGAATCTGAT
GGCAGCTCAACCACACACGAAGCATCGTACATAGTGGGCTGTGATGGGGCGCACTCGGTTGTTCGCCACGGGATT
GGTGCCAAATTCGAGGGCGAAACGTACAAACCGCTGTTCTATATCGCCGACGTCGAAGGCAAAAGCGAGAAGCAT
TTCAACGGCGAAGGGAACGTGGTGTTCACCAACGACACTTTCAACCTGGTTGTCCCGTACAACAAAGCCGGCCAT
GTGCGATTGGTTGGTATTATCATGCCGGATGAAAACGACAATGACAACTCTGAATCGCTAGTGCATCAGCACCAG
ATCACGTTCGACGACGTTCGACCCCAGATCATGCAAGCCATGGATATCGATATCACCAAGGTCAACTGGTTCTCC
ACCTATCGCAGTCACCACCGTGTGGCCGACAAATTCCGCAGCAATCGGGCATTCCTTGTTGGGGATGCGGCTCAC
ATCCACAGCCCAGTCGGCGGGCAGGGCATGAATACCGGTATCATGGACGCGATCAATTTGGCGTGGAAGCTCGCA
ACGGTCCTAAAGCAGACAAACATGAGCGAGGATGCACAAAACCAGCTTTTGGATTCATATGAGAACGAACGCCGC
TCATTCGCTATGATGATAGTCAAGTCCACCGACGCGGGCTTTACCACATTGACGTCAAAAGGAATCTTCCCACAC
ATTCTTCGAAATTGGCTGATTCCGTACCTTGTGCCACTGCTCTTGAAACTTGATTTTGCCCGGACTAGAATCTTC
CGCGGTGCTTCTCAGCTCGTTTGCCACTATAGGGGCAGCAGTCTTTCTCAGACTGGAGAAGGGGCCGTGCAGCCT
GGCGACCGTCTCCCATGGGCTGCAATCAACGAGGTGGATAACTTTTCAACTCTGCGAGAAGTCTGTTGGCAGCTC
CATATCTATGGCGAATCCCTACCACAAATTGAAAAGTGGGCCCAACAGACGAGTGTGAAGGTCTTCGTCTTTCCC
TGGCAGGATCAATATGCCAATGCTGGGCTGATCGAGAATGCCGTTTACTTGCTGCGACCTGATCAGTACATTGCA
GGGATTTTCAAGGACCCCTCTGTTGAGGGGCTGAACGAGTACTTTGCTACTCGGGGGTTGTACCTAGGTCGAGAC
TAG
Gene >Pro_DTO377G3_2|g1075.t1
ATGAAACCCAAAACGGATGTTCTCATTGTCGGCGCAGGCCCAACTGGCCTTGTCCTTGCTCTGTGGCTTCACCAT
CAAGGTGTCAATGTCCACATTTTCGACCAGGCGGAGGCCCCGGCGCAGAACTCCCGAGCGATCATTGTCCATGCG
CGCATAGTCGAGCTGTATAGACAACTTGGATTGAGCGAAGACTTGCTGAAACTTGGGTACAAGCTGCCGGCCACG
AATCTCTGGGTTTATAGGCAGCGCAAAGCGCACGTCCCGCTGGAAGACTTCGGTCGCGATTTGACTCCGTACCCG
TTCATGCTCAGCGTACCGCAAGACGACCACGAAAGGATGCTCGAAAAGCGACTGAATGACGTGGGCATCCATGTC
GAGCGAGGGTCGAAGTTGCAAGGCTTTGTGGACCACGGGTCTAGCATCACTGCCACCTTGTTCCGCGAATCTGAT
GGCAGCTCAACCACACACGAAGCATCGTACATAGTGGGCTGTGATGGGGCGCACTCGGTTGTTCGCCACGGGATT
GGTGCCAAATTCGAGGGCGAAACGTACAAACCGCTGTTCTATATCGCCGACGTCGAAGGCAAAAGCGAGAAGCAT
TTCAACGGCGAAGGGAACGTGGTGTTCACCAACGACACTTTCAACCTGGTTGTCCCGTACAACAAAGCCGGCCAT
GTGCGATTGGTTGGTATTATCATGCCGGATGAAAACGACAATGACAACTCTGAATCGCTAGTGCATCAGCACCAG
ATCACGTTCGACGACGTTCGACCCCAGATCATGCAAGCCATGGATATCGATATCACCAAGGTCAACTGGTTCTCC
ACCTATCGCAGTCACCACCGTGTGGCCGACAAATTCCGCAGCAATCGGGCATTCCTTGTTGGGGATGCGGCTCAC
ATCCACAGCCCAGTCGGCGGGCAGGGCATGAATACCGGTATCATGGACGCGATCAATTTGGCGTGGAAGCTCGCA
ACGGTCCTAAAGCAGACAAACATGAGCGAGGATGCACAAAACCAGCTTTTGGATTCATATGAGAACGAACGCCGC
TCATTCGCTATGATGATAGTCAAGTCCACCGACGCGGGCTTTACCACATTGACGTCAAAAGGAATCTTCCCACAC
ATTCTTCGAAATTGGCTGATTCCGTACCTTGTGCCACTGCTCTTGAAACTTGATTTTGCCCGGACTAGAATCTTC
CGCGGTGCTTCTCAGCTCGTTTGCCACTATAGGGGCAGCAGTCTTTCTCAGACTGGAGAAGGGGCCGTGCAGCCT
GGCGACCGTCTCCCATGGGCTGCAATCAACGAGGTGGATAACTTTTCAACTCTGCGAGAAGTCTGTTGGCAGCTC
CATATCTATGGCGAATCCCTACCACAAATTGAAAAGTGGGCCCAACAGACGAGTGTGAAGGTCTTCGTCTTTCCC
TGGCAGGATCAATATGCCAATGCTGGGCTGATCGAGAATGCCGTTTACTTGCTGCGACCTGATCAGTACATTGCA
GGGATTTTCAAGGACCCCTCTGTTGAGGGGCTGAACGAGTACTTTGCTACTCGGGGGTTGTACCTAGGTCGAGAC
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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