© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1072.t1 |
| Gene name | |
| Location | scaffold_01:2844928..2847465 |
| Strand | - |
| Gene length (bp) | 2537 |
| Transcript length (bp) | 2106 |
| Coding sequence length (bp) | 2106 |
| Protein length (aa) | 702 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 6.6E-08 | 3 | 35 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0046914 | transition metal ion binding | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0043167 | ion binding | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0050789 | regulation of biological process | No |
| GO:0005488 | binding | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0065007 | biological regulation | No |
| GO:0003674 | molecular_function | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0043169 | cation binding | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0050794 | regulation of cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 535 | 557 | 22 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 15.94 | 8.43 | 23.46 |
| 5d_25C | Five days - 25 degrees Celsius | 10.84 | 5.20 | 16.48 |
| 7d_25C | Seven days - 25 degrees Celsius | 9.78 | 4.55 | 15.00 |
| 10d_25C | Ten days - 25 degrees Celsius | 7.46 | 3.22 | 11.70 |
| 7d_15C | Seven days - 15 degrees Celsius | 9.89 | 4.59 | 15.18 |
| 7d_30C | Seven days - 30 degrees Celsius | 11.75 | 5.75 | 17.76 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.179647 | no |
| 3d_25C | 7d_25C | 0.083660 | no |
| 3d_25C | 7d_15C | 0.090191 | no |
| 3d_25C | 7d_30C | 0.295940 | no |
| 3d_25C | 10d_25C | 0.005235 | yes |
| 5d_25C | 7d_25C | 0.802405 | no |
| 5d_25C | 7d_15C | 0.824386 | no |
| 5d_25C | 7d_30C | 0.841577 | no |
| 5d_25C | 10d_25C | 0.236827 | no |
| 7d_25C | 7d_15C | 0.981790 | no |
| 7d_25C | 7d_30C | 0.605950 | no |
| 7d_25C | 10d_25C | 0.442874 | no |
| 7d_15C | 7d_30C | 0.634269 | no |
| 7d_15C | 10d_25C | 0.419353 | no |
| 7d_30C | 10d_25C | 0.123900 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1072.t1 MSACDLCHTRKVKCDRQDPCMNCTDAGAECLRNRQARVHRPRVSRLETLSQRLARLEESSNKEAIYFPARNYATS TTSSSPSGNLTSNTEVLNDNQKRYRAYEPHDTAALQAPPSKHRKSQSVAHQAHSPGSTHHASEAREYIEHELQCN PALSKDRRTALESARKFVSQLSNPTLYWEETAAMPDMDVQETIQPPTLTPELLYMMLPGPDKKTNSQGTINWPDH ISDKVLEQMGLAIIEGTECEQVLQHYRIIVWVKAMICISKMAPLIISEPLRNHFRSLKKRYEVAATEILNQIPLA AEPSLLLLQSVLSATRLMQYLGDMTRCWMLTALASRMIVSLNYHNITDTSPRGQIEENIHASVYMCYYFDKTLSL LLLRPPSLPDLKVKPTKLIHIDPDLPTSTMMTGIVEYSELKNTLLYILLDNKTTGDTEKANILSDLVARAQIIHS NMQTSRRHQEQQFPQSWSHLRREWLSIDFNYYSILTTIIQARSSVLKSRLVCENCLYTAREALSTLRALQEACSS RINSIDSYPYFLTWTMLLFPLAPFFVLFCNVIATSNEKDFNMIKNITGDLHQFAEANASIGKLYKLFSKFLDLCA PLVKGNPEPSRLEQPKAALPEANTAGNTEGNIASYTDIFGRADNNPPAFVSLGGADSTGELTAPPSVGGWDDSLV WELFDNQPSLGWAESELWNVMTQFDA* |
| Coding | >Pro_DTO377G3_2|g1072.t1 ATGTCTGCGTGCGATTTATGTCATACTCGGAAGGTGAAATGCGATCGCCAGGACCCTTGCATGAACTGTACCGAT GCAGGTGCAGAATGTCTCCGCAATCGCCAGGCACGAGTTCATAGACCACGGGTCTCTCGATTGGAGACATTGTCC CAAAGGTTGGCGAGGCTAGAAGAGTCAAGCAATAAAGAGGCAATATACTTTCCAGCAAGGAATTACGCCACTAGC ACAACGTCTTCTTCGCCTTCGGGCAACCTAACAAGTAATACTGAAGTTCTCAACGACAATCAGAAGCGATATCGA GCATATGAGCCCCATGACACAGCTGCCCTGCAGGCACCACCAAGTAAGCACCGCAAGTCTCAGAGTGTGGCGCAC CAGGCACATTCTCCTGGCTCAACACATCACGCGAGTGAGGCTAGAGAGTACATTGAGCATGAACTCCAATGCAAC CCTGCTCTGTCGAAAGATAGACGCACGGCACTTGAATCAGCGCGCAAGTTCGTCAGTCAGCTATCCAATCCGACT CTATATTGGGAGGAGACTGCGGCTATGCCTGATATGGATGTTCAAGAAACCATACAACCACCTACTCTCACACCG GAATTGCTCTACATGATGCTACCTGGACCCGATAAGAAAACCAACTCTCAGGGAACAATCAATTGGCCTGATCAC ATCTCCGACAAAGTACTAGAGCAAATGGGCCTTGCAATTATCGAGGGCACAGAATGTGAGCAAGTGCTCCAGCAT TACCGGATCATTGTCTGGGTGAAGGCCATGATTTGTATATCAAAAATGGCCCCTCTCATTATAAGCGAGCCTTTG AGGAATCATTTTCGGTCACTCAAGAAGAGGTATGAAGTCGCTGCCACAGAGATTTTGAATCAAATTCCACTCGCA GCTGAACCTAGTCTTCTTTTGCTTCAATCGGTTCTGTCTGCAACCCGTTTGATGCAATATTTAGGAGACATGACA CGCTGCTGGATGTTGACAGCACTAGCGTCACGGATGATTGTTTCCTTGAACTATCACAACATCACAGATACCAGT CCTCGAGGTCAGATAGAGGAAAATATTCACGCTAGTGTGTACATGTGCTACTACTTCGACAAAACACTCAGCCTC CTGCTCCTCCGACCACCGTCTCTACCTGATCTGAAAGTCAAACCAACCAAGTTGATCCACATCGACCCTGACCTA CCAACATCTACTATGATGACAGGCATAGTGGAGTATTCAGAGCTGAAGAATACTCTACTGTACATATTGCTCGAT AACAAGACAACTGGAGACACGGAGAAGGCCAATATACTGTCTGATCTTGTGGCGCGGGCACAAATAATCCACTCC AATATGCAAACATCTCGTCGTCACCAAGAACAGCAATTCCCACAATCATGGAGCCATCTGCGGCGCGAATGGCTA TCAATTGACTTCAACTACTACTCTATTCTCACGACCATCATCCAAGCCCGCTCCTCGGTACTCAAGTCTCGCCTG GTTTGCGAGAACTGTCTGTACACAGCCCGAGAAGCCCTCTCCACTCTCCGAGCTTTACAGGAAGCATGCTCAAGT CGCATCAATTCTATCGATTCCTATCCATACTTTCTTACCTGGACAATGCTGCTATTTCCTCTAGCACCGTTCTTT GTCCTGTTCTGCAATGTGATCGCAACATCAAACGAGAAAGACTTCAATATGATCAAAAACATCACCGGAGACCTA CATCAATTCGCAGAGGCGAATGCCTCGATCGGCAAGCTGTACAAGCTATTCTCCAAATTTTTGGACCTGTGTGCA CCTTTGGTCAAAGGGAACCCCGAACCTTCCCGCTTAGAACAGCCAAAAGCTGCACTCCCTGAAGCGAACACAGCT GGAAACACCGAGGGCAATATTGCGTCCTACACAGATATATTTGGCCGTGCTGACAATAACCCTCCGGCTTTTGTC AGTCTTGGGGGTGCAGATTCCACTGGAGAACTCACTGCGCCACCGTCTGTGGGGGGATGGGATGACAGTCTTGTG TGGGAATTGTTCGATAATCAGCCCTCGTTGGGGTGGGCGGAGTCGGAACTGTGGAATGTGATGACGCAGTTTGAT GCGTGA |
| Transcript | >Pro_DTO377G3_2|g1072.t1 ATGTCTGCGTGCGATTTATGTCATACTCGGAAGGTGAAATGCGATCGCCAGGACCCTTGCATGAACTGTACCGAT GCAGGTGCAGAATGTCTCCGCAATCGCCAGGCACGAGTTCATAGACCACGGGTCTCTCGATTGGAGACATTGTCC CAAAGGTTGGCGAGGCTAGAAGAGTCAAGCAATAAAGAGGCAATATACTTTCCAGCAAGGAATTACGCCACTAGC ACAACGTCTTCTTCGCCTTCGGGCAACCTAACAAGTAATACTGAAGTTCTCAACGACAATCAGAAGCGATATCGA GCATATGAGCCCCATGACACAGCTGCCCTGCAGGCACCACCAAGTAAGCACCGCAAGTCTCAGAGTGTGGCGCAC CAGGCACATTCTCCTGGCTCAACACATCACGCGAGTGAGGCTAGAGAGTACATTGAGCATGAACTCCAATGCAAC CCTGCTCTGTCGAAAGATAGACGCACGGCACTTGAATCAGCGCGCAAGTTCGTCAGTCAGCTATCCAATCCGACT CTATATTGGGAGGAGACTGCGGCTATGCCTGATATGGATGTTCAAGAAACCATACAACCACCTACTCTCACACCG GAATTGCTCTACATGATGCTACCTGGACCCGATAAGAAAACCAACTCTCAGGGAACAATCAATTGGCCTGATCAC ATCTCCGACAAAGTACTAGAGCAAATGGGCCTTGCAATTATCGAGGGCACAGAATGTGAGCAAGTGCTCCAGCAT TACCGGATCATTGTCTGGGTGAAGGCCATGATTTGTATATCAAAAATGGCCCCTCTCATTATAAGCGAGCCTTTG AGGAATCATTTTCGGTCACTCAAGAAGAGGTATGAAGTCGCTGCCACAGAGATTTTGAATCAAATTCCACTCGCA GCTGAACCTAGTCTTCTTTTGCTTCAATCGGTTCTGTCTGCAACCCGTTTGATGCAATATTTAGGAGACATGACA CGCTGCTGGATGTTGACAGCACTAGCGTCACGGATGATTGTTTCCTTGAACTATCACAACATCACAGATACCAGT CCTCGAGGTCAGATAGAGGAAAATATTCACGCTAGTGTGTACATGTGCTACTACTTCGACAAAACACTCAGCCTC CTGCTCCTCCGACCACCGTCTCTACCTGATCTGAAAGTCAAACCAACCAAGTTGATCCACATCGACCCTGACCTA CCAACATCTACTATGATGACAGGCATAGTGGAGTATTCAGAGCTGAAGAATACTCTACTGTACATATTGCTCGAT AACAAGACAACTGGAGACACGGAGAAGGCCAATATACTGTCTGATCTTGTGGCGCGGGCACAAATAATCCACTCC AATATGCAAACATCTCGTCGTCACCAAGAACAGCAATTCCCACAATCATGGAGCCATCTGCGGCGCGAATGGCTA TCAATTGACTTCAACTACTACTCTATTCTCACGACCATCATCCAAGCCCGCTCCTCGGTACTCAAGTCTCGCCTG GTTTGCGAGAACTGTCTGTACACAGCCCGAGAAGCCCTCTCCACTCTCCGAGCTTTACAGGAAGCATGCTCAAGT CGCATCAATTCTATCGATTCCTATCCATACTTTCTTACCTGGACAATGCTGCTATTTCCTCTAGCACCGTTCTTT GTCCTGTTCTGCAATGTGATCGCAACATCAAACGAGAAAGACTTCAATATGATCAAAAACATCACCGGAGACCTA CATCAATTCGCAGAGGCGAATGCCTCGATCGGCAAGCTGTACAAGCTATTCTCCAAATTTTTGGACCTGTGTGCA CCTTTGGTCAAAGGGAACCCCGAACCTTCCCGCTTAGAACAGCCAAAAGCTGCACTCCCTGAAGCGAACACAGCT GGAAACACCGAGGGCAATATTGCGTCCTACACAGATATATTTGGCCGTGCTGACAATAACCCTCCGGCTTTTGTC AGTCTTGGGGGTGCAGATTCCACTGGAGAACTCACTGCGCCACCGTCTGTGGGGGGATGGGATGACAGTCTTGTG TGGGAATTGTTCGATAATCAGCCCTCGTTGGGGTGGGCGGAGTCGGAACTGTGGAATGTGATGACGCAGTTTGAT GCGTGA |
| Gene | >Pro_DTO377G3_2|g1072.t1 ATGTCTGCGGTAAGTTTGCCTGAATAATGTCGTCGCGAAAGGCATAGGCTGTTTCTAAAACAAACATAATGTAGC TCAGCTAATCGGCTACCAGTGCGATTTATGTCATACTCGGAAGGTATAACCATTCGTTTTTCACATATGATTCTT TGACAGATGCTTATATCGGGTCATTGTATGGAGTAGGTGAAATGCGATCGCCAGGACCCTTGCATGAACTGTACC GATGCAGGTGCAGAATGTCTCCGCAATCGCCAGGCACGAGTTCATAGACCACGGGTCTCTCGGTACGTGCAATTC ACGATGCGTGTCTTTAAAATCTATAGCTGACATTTCAAGATTGGAGACATTGTCCCAAAGGTTGGCGAGGCTAGA AGAGTCAAGCAATAAAGAGGCAATATACTTTCCAGCAAGGAATTACGCCACTAGCACAACGTCTTCTTCGCCTTC GGGCAACCTAACAAGTAATACTGAAGTTCTCAACGACAATCAGAAGCGATATCGAGCATATGAGCCCCATGACAC AGCTGCCCTGCAGGCACCACCAAGTAAGCACCGCAAGTCTCAGAGTGTGGCGCACCAGGCACATTCTCCTGGCTC AACACATCACGCGAGTGAGGCTAGAGAGTACATTGAGCATGAACTCCAATGCAACCCTGCTCTGTCGAAAGATAG ACGCACGGCACTTGAATCAGCGCGCAAGTTCGTCAGTCAGCTATCCAATCCGACTCTATATTGGGAGGAGACTGC GGCTATGCCTGATATGGATGTTCAAGAAACCATACAACCACCTACTCTCACACCGGAATTGCTCTACATGATGCT ACCTGGTAAGTTTCGAGAATGGGTCAGATGTCAGTGATACTGATCATCATAGGACCCGATAAGAAAACCAACTCT CAGGGAACAATCAATTGGCCTGATCACATCTCCGACAAAGTACTAGAGCAAATGGGCCTTGCAATTATCGAGGGC ACAGAATGTGAGCAAGTGCTCCAGCATTACCGGATCATTGTCTGGGTGAAGGCCATGATTTGTATATCAAAAATG GCCCCTCTCATTATAAGCGAGCCTTTGAGGAATCATTTTCGGTCACTCAAGAAGAGGTATGAAGTCGCTGCCACA GAGATTTTGAATCAAATTCCACTCGCAGCTGAACCTAGTCTTCTTTTGCTTCAATCGGTTCTGTCTGCAGTATGT TTCTCCTGTCTCTTCCGCGTGGCTTTATATACATTGACTCATTTCTGACTCACGACAGACCCGTTTGATGCAATA TTTAGGAGACATGACACGCTGCTGGATGTTGACAGCACTAGCGTCACGGATGATTGTTTCCTTGAACTATCACAA CATCACAGATACCAGTCCTCGAGGTCAGATAGAGGAAAATATTCACGCTAGTGTGTACATGTGCTACTACTTCGA CAAAACACTCAGCCTCCTGCTCCTCCGACCACCGTCTCTACCTGATCTGAAAGTCAAACCAACCAAGTTGATCCA CATCGACCCTGACCTACCAACATCTACTATGATGACAGGCATAGTGGAGTATTCAGAGCTGAAGAATACTCTACT GTACATATTGCTCGATAACAAGACAACTGGAGACACGGAGAAGGCCAATATACTGTCTGATCTTGTGGCGCGGGC ACAAATAATCCACTCCAATATGCAAACAGTAAGAGAAATCAAGGATCCGCCAGCATAACCGCTAACCCAATTTTC AGTCTCGTCGTCACCAAGAACAGCAATTCCCACAATCATGGAGCCATCTGCGGCGCGAATGGCTATCAATTGACT TCAACTACTACTCTATTCTCACGACCATCATCCAAGCCCGCTCCTCGGTACTCAAGTCTCGCCTGGTTTGCGAGA ACTGTCTGTACACAGCCCGAGAAGCCCTCTCCACTCTCCGAGCTTTACAGGAAGCATGCTCAAGTCGCATCAATT CTATCGATTCCTATCCATACTTTCTTACCTGGTATGATAGAGCTATTTTAAAGCCACTTTTAATACCTTACAATC GAAACTAATGACCCTTTAACAGGACAATGCTGCTATTTCCTCTAGCACCGTTCTTTGTCCTGTTCTGCAATGTGA TCGCAACATCAAACGAGAAAGACTTCAATATGATCAAAAACATCACCGGAGACCTACATCAATTCGCAGAGGCGA ATGCCTCGATCGGCAAGCTGTACAAGCTATTCTCCAAATTTTTGGACCTGTGTGCACCTTTGGTCAAAGGGAACC CCGAACCTTCCCGCTTAGAACAGCCAAAAGCTGCACTCCCTGAAGCGAACACAGCTGGAAACACCGAGGGCAATA TTGCGTCCTACACAGATATATTTGGCCGTGCTGACAATAACCCTCCGGCTTTTGTCAGTCTTGGGGGTGCAGATT CCACTGGAGAACTCACTGCGCCACCGTCTGTGGGGGGATGGGATGACAGTCTTGTGTGGGAATTGTTCGATAATC AGCCCTCGTTGGGGTGGGCGGAGTCGGAACTGTGGAATGTGATGACGCAGTTTGATGCGTGA |