Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1071.t1
Gene name
Locationscaffold_01:2843395..2844599
Strand+
Gene length (bp)1204
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05739 SNARE SNARE domain 2.2E-12 293 345
PF11416 Syntaxin-5_N Syntaxin-5 N-terminal, Sly1p-binding domain 5.1E-07 1 23

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

Domain # Start End Length
1 328 347 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1071.t1
MTGPSIQDRTSEFSAILGHAQKRLGTSKVGSQRQALLTDAQRRQANVSPQGPVQEAKAARSEFARRARDIGRGIT
GTMAKLQRLAELAKRKTLFDDRPVEISELTYVIKQDLAALNQNIASLQALTQAQHPKSNRSKTDQEGEHNDNVVV
MLQGKLADVGASFKEVLEVRTKNIQASRTRTENFVSSVSSKSHSALDAQRSDSPLYNTAGRRTPQPGYQGNSSDL
LTLEPSNPSPLGRPSFQSDQQLMVMEEGESSNTYVQARGEAIEAIERTISELGGIFGQLAQMVSEQSEMIQRIDA
NTEDVVDNVQGAQRELMKYWTRVSGNRWLIAKMFGILMIFFLLWVLIS*
Coding >Pro_DTO377G3_2|g1071.t1
ATGACCGGCCCGTCGATACAAGACAGGACCAGCGAGTTCAGCGCGATCTTGGGCCACGCCCAGAAGCGCCTGGGG
ACATCGAAAGTTGGTTCGCAGCGCCAGGCATTGTTGACTGATGCGCAAAGGCGACAAGCCAATGTGTCGCCCCAA
GGTCCCGTACAGGAGGCGAAGGCGGCAAGGTCGGAGTTCGCACGGCGGGCGCGAGATATCGGAAGGGGGATAACT
GGAACAATGGCAAAATTGCAGCGATTGGCTGAATTGGCGAAGCGGAAAACACTCTTCGACGACCGACCTGTCGAG
ATCTCCGAATTGACATACGTGATTAAGCAAGACCTTGCCGCTTTAAACCAAAACATTGCCTCGCTGCAGGCGCTC
ACCCAAGCGCAACACCCCAAATCGAATCGCTCGAAGACAGACCAGGAGGGAGAACACAATGACAATGTTGTTGTT
ATGCTGCAGGGAAAGCTGGCCGATGTAGGCGCTAGTTTCAAAGAGGTACTGGAAGTCCGCACGAAGAATATTCAA
GCATCCCGAACTCGAACCGAGAACTTCGTTTCCTCGGTATCATCCAAATCACACAGCGCCCTCGACGCACAGCGC
TCAGACTCGCCTTTGTATAACACCGCGGGACGACGGACACCTCAGCCCGGATATCAAGGCAACTCCTCCGACCTT
TTGACCCTCGAGCCCTCAAACCCTTCGCCATTGGGGCGTCCGTCCTTCCAATCAGATCAACAACTGATGGTAATG
GAAGAAGGAGAATCGAGTAATACATATGTTCAAGCTCGAGGCGAAGCCATCGAAGCCATTGAGCGAACTATCAGC
GAATTGGGTGGCATTTTTGGTCAGCTGGCGCAGATGGTTAGCGAACAGTCAGAAATGATTCAACGCATAGATGCC
AATACCGAAGATGTGGTCGACAACGTCCAGGGAGCACAGAGAGAACTAATGAAGTATTGGACGCGTGTCTCCGGC
AATCGCTGGCTCATTGCCAAAATGTTTGGTATTCTGATGATTTTCTTCCTTCTCTGGGTCCTGATTTCGTGA
Transcript >Pro_DTO377G3_2|g1071.t1
ATGACCGGCCCGTCGATACAAGACAGGACCAGCGAGTTCAGCGCGATCTTGGGCCACGCCCAGAAGCGCCTGGGG
ACATCGAAAGTTGGTTCGCAGCGCCAGGCATTGTTGACTGATGCGCAAAGGCGACAAGCCAATGTGTCGCCCCAA
GGTCCCGTACAGGAGGCGAAGGCGGCAAGGTCGGAGTTCGCACGGCGGGCGCGAGATATCGGAAGGGGGATAACT
GGAACAATGGCAAAATTGCAGCGATTGGCTGAATTGGCGAAGCGGAAAACACTCTTCGACGACCGACCTGTCGAG
ATCTCCGAATTGACATACGTGATTAAGCAAGACCTTGCCGCTTTAAACCAAAACATTGCCTCGCTGCAGGCGCTC
ACCCAAGCGCAACACCCCAAATCGAATCGCTCGAAGACAGACCAGGAGGGAGAACACAATGACAATGTTGTTGTT
ATGCTGCAGGGAAAGCTGGCCGATGTAGGCGCTAGTTTCAAAGAGGTACTGGAAGTCCGCACGAAGAATATTCAA
GCATCCCGAACTCGAACCGAGAACTTCGTTTCCTCGGTATCATCCAAATCACACAGCGCCCTCGACGCACAGCGC
TCAGACTCGCCTTTGTATAACACCGCGGGACGACGGACACCTCAGCCCGGATATCAAGGCAACTCCTCCGACCTT
TTGACCCTCGAGCCCTCAAACCCTTCGCCATTGGGGCGTCCGTCCTTCCAATCAGATCAACAACTGATGGTAATG
GAAGAAGGAGAATCGAGTAATACATATGTTCAAGCTCGAGGCGAAGCCATCGAAGCCATTGAGCGAACTATCAGC
GAATTGGGTGGCATTTTTGGTCAGCTGGCGCAGATGGTTAGCGAACAGTCAGAAATGATTCAACGCATAGATGCC
AATACCGAAGATGTGGTCGACAACGTCCAGGGAGCACAGAGAGAACTAATGAAGTATTGGACGCGTGTCTCCGGC
AATCGCTGGCTCATTGCCAAAATGTTTGGTATTCTGATGATTTTCTTCCTTCTCTGGGTCCTGATTTCGTGA
Gene >Pro_DTO377G3_2|g1071.t1
ATGACCGGCCCGTCGATACAAGACAGGACCAGCGAGTTCAGCGCGATCTTGGGCCACGCCCAGAAGCGCCTGGGG
ACATCGAAAGTTGGTTCGCAGCGCCAGGCATTGTTGACTGATGCGCAAAGGCGACAAGCCAATGTGTCGCCCCAA
GGTCCCGTACAGGAGGCGAAGGCGGCAAGGTCGGAGTTCGCACGGCGGGCGCGAGATATCGGAAGGGGGATAACT
GGAACAATGGCAAAATTGCAGCGATTGGCTGAATGTAAGTCTGGTCACGTCGCTCAAAATGCCAGCAATCTAACG
AGGAAACAGTGGCGAAGCGGAAAACACTCTTCGACGACCGACCTGTCGAGATCTCCGAATTGACATACGTGATTA
AGCAAGACCTTGCCGCTTTAAACCAAAACATTGCCTCGCTGCAGGCGCTCACCCAAGCGCAACACCCCAAATCGA
ATCGCTCGAAGACAGACCAGGAGGGAGAACACAATGACAATGTGAGTGAGGCATGGGAAAGGCCGCGCACGGACA
ATTCGCTGATTACCCATTTCAGGTTGTTGTTATGCTGCAGGGAAAGCTGGCCGATGTAGGCGCTAGTTTCAAAGA
GGTACTGGAAGTCCGCACGAAGAATATTCAAGCATCCCGAACTCGAACCGAGAACTTCGTTTCCTCGGTATCATC
CAAATCACACAGCGCCCTCGACGCACAGCGCTCAGACTCGCCTTTGTATAACACCGCGGGACGACGGACACCTCA
GCCCGGATATCAAGGCAACTCCTCCGACCTTTTGACCCTCGAGCCCTCAAACCCTTCGCCATTGGGGCGTCCGTC
CTTCCAATCAGATCAACAACTGATGGTAATGGAAGAAGGAGAATCGAGTAATACATATGTTCAAGCTCGAGGCGA
AGCCATCGAAGCCATTGAGCGAACTATCAGCGAATTGGGTGGCATTTTTGGTCAGCTGGCGCAGATGGTTAGCGA
ACAGTCAGAAATGATTCAACGCATAGATGCCAATACCGAAGATGTGGTCGACAACGTCCAGGGAGCACAGAGAGA
ACTAATGAAGTATTGGACGCGTGTCTCCGGCAATCGCTGGCTCATTGCCAAAATGTTTGGTATTCTGATGGTATG
TTCACTCATTAAATTTCTTGTCTGCTCATACTAATGACCGTTATAGATTTTCTTCCTTCTCTGGGTCCTGATTTC
GTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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