Protein ID | Pro_DTO377G3_2|g1071.t1 |
Gene name | |
Location | scaffold_01:2843395..2844599 |
Strand | + |
Gene length (bp) | 1204 |
Transcript length (bp) | 1047 |
Coding sequence length (bp) | 1047 |
Protein length (aa) | 349 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05739 | SNARE | SNARE domain | 2.2E-12 | 293 | 345 |
PF11416 | Syntaxin-5_N | Syntaxin-5 N-terminal, Sly1p-binding domain | 5.1E-07 | 1 | 23 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 66 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 328 | 347 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g1071.t1 MTGPSIQDRTSEFSAILGHAQKRLGTSKVGSQRQALLTDAQRRQANVSPQGPVQEAKAARSEFARRARDIGRGIT GTMAKLQRLAELAKRKTLFDDRPVEISELTYVIKQDLAALNQNIASLQALTQAQHPKSNRSKTDQEGEHNDNVVV MLQGKLADVGASFKEVLEVRTKNIQASRTRTENFVSSVSSKSHSALDAQRSDSPLYNTAGRRTPQPGYQGNSSDL LTLEPSNPSPLGRPSFQSDQQLMVMEEGESSNTYVQARGEAIEAIERTISELGGIFGQLAQMVSEQSEMIQRIDA NTEDVVDNVQGAQRELMKYWTRVSGNRWLIAKMFGILMIFFLLWVLIS* |
Coding | >Pro_DTO377G3_2|g1071.t1 ATGACCGGCCCGTCGATACAAGACAGGACCAGCGAGTTCAGCGCGATCTTGGGCCACGCCCAGAAGCGCCTGGGG ACATCGAAAGTTGGTTCGCAGCGCCAGGCATTGTTGACTGATGCGCAAAGGCGACAAGCCAATGTGTCGCCCCAA GGTCCCGTACAGGAGGCGAAGGCGGCAAGGTCGGAGTTCGCACGGCGGGCGCGAGATATCGGAAGGGGGATAACT GGAACAATGGCAAAATTGCAGCGATTGGCTGAATTGGCGAAGCGGAAAACACTCTTCGACGACCGACCTGTCGAG ATCTCCGAATTGACATACGTGATTAAGCAAGACCTTGCCGCTTTAAACCAAAACATTGCCTCGCTGCAGGCGCTC ACCCAAGCGCAACACCCCAAATCGAATCGCTCGAAGACAGACCAGGAGGGAGAACACAATGACAATGTTGTTGTT ATGCTGCAGGGAAAGCTGGCCGATGTAGGCGCTAGTTTCAAAGAGGTACTGGAAGTCCGCACGAAGAATATTCAA GCATCCCGAACTCGAACCGAGAACTTCGTTTCCTCGGTATCATCCAAATCACACAGCGCCCTCGACGCACAGCGC TCAGACTCGCCTTTGTATAACACCGCGGGACGACGGACACCTCAGCCCGGATATCAAGGCAACTCCTCCGACCTT TTGACCCTCGAGCCCTCAAACCCTTCGCCATTGGGGCGTCCGTCCTTCCAATCAGATCAACAACTGATGGTAATG GAAGAAGGAGAATCGAGTAATACATATGTTCAAGCTCGAGGCGAAGCCATCGAAGCCATTGAGCGAACTATCAGC GAATTGGGTGGCATTTTTGGTCAGCTGGCGCAGATGGTTAGCGAACAGTCAGAAATGATTCAACGCATAGATGCC AATACCGAAGATGTGGTCGACAACGTCCAGGGAGCACAGAGAGAACTAATGAAGTATTGGACGCGTGTCTCCGGC AATCGCTGGCTCATTGCCAAAATGTTTGGTATTCTGATGATTTTCTTCCTTCTCTGGGTCCTGATTTCGTGA |
Transcript | >Pro_DTO377G3_2|g1071.t1 ATGACCGGCCCGTCGATACAAGACAGGACCAGCGAGTTCAGCGCGATCTTGGGCCACGCCCAGAAGCGCCTGGGG ACATCGAAAGTTGGTTCGCAGCGCCAGGCATTGTTGACTGATGCGCAAAGGCGACAAGCCAATGTGTCGCCCCAA GGTCCCGTACAGGAGGCGAAGGCGGCAAGGTCGGAGTTCGCACGGCGGGCGCGAGATATCGGAAGGGGGATAACT GGAACAATGGCAAAATTGCAGCGATTGGCTGAATTGGCGAAGCGGAAAACACTCTTCGACGACCGACCTGTCGAG ATCTCCGAATTGACATACGTGATTAAGCAAGACCTTGCCGCTTTAAACCAAAACATTGCCTCGCTGCAGGCGCTC ACCCAAGCGCAACACCCCAAATCGAATCGCTCGAAGACAGACCAGGAGGGAGAACACAATGACAATGTTGTTGTT ATGCTGCAGGGAAAGCTGGCCGATGTAGGCGCTAGTTTCAAAGAGGTACTGGAAGTCCGCACGAAGAATATTCAA GCATCCCGAACTCGAACCGAGAACTTCGTTTCCTCGGTATCATCCAAATCACACAGCGCCCTCGACGCACAGCGC TCAGACTCGCCTTTGTATAACACCGCGGGACGACGGACACCTCAGCCCGGATATCAAGGCAACTCCTCCGACCTT TTGACCCTCGAGCCCTCAAACCCTTCGCCATTGGGGCGTCCGTCCTTCCAATCAGATCAACAACTGATGGTAATG GAAGAAGGAGAATCGAGTAATACATATGTTCAAGCTCGAGGCGAAGCCATCGAAGCCATTGAGCGAACTATCAGC GAATTGGGTGGCATTTTTGGTCAGCTGGCGCAGATGGTTAGCGAACAGTCAGAAATGATTCAACGCATAGATGCC AATACCGAAGATGTGGTCGACAACGTCCAGGGAGCACAGAGAGAACTAATGAAGTATTGGACGCGTGTCTCCGGC AATCGCTGGCTCATTGCCAAAATGTTTGGTATTCTGATGATTTTCTTCCTTCTCTGGGTCCTGATTTCGTGA |
Gene | >Pro_DTO377G3_2|g1071.t1 ATGACCGGCCCGTCGATACAAGACAGGACCAGCGAGTTCAGCGCGATCTTGGGCCACGCCCAGAAGCGCCTGGGG ACATCGAAAGTTGGTTCGCAGCGCCAGGCATTGTTGACTGATGCGCAAAGGCGACAAGCCAATGTGTCGCCCCAA GGTCCCGTACAGGAGGCGAAGGCGGCAAGGTCGGAGTTCGCACGGCGGGCGCGAGATATCGGAAGGGGGATAACT GGAACAATGGCAAAATTGCAGCGATTGGCTGAATGTAAGTCTGGTCACGTCGCTCAAAATGCCAGCAATCTAACG AGGAAACAGTGGCGAAGCGGAAAACACTCTTCGACGACCGACCTGTCGAGATCTCCGAATTGACATACGTGATTA AGCAAGACCTTGCCGCTTTAAACCAAAACATTGCCTCGCTGCAGGCGCTCACCCAAGCGCAACACCCCAAATCGA ATCGCTCGAAGACAGACCAGGAGGGAGAACACAATGACAATGTGAGTGAGGCATGGGAAAGGCCGCGCACGGACA ATTCGCTGATTACCCATTTCAGGTTGTTGTTATGCTGCAGGGAAAGCTGGCCGATGTAGGCGCTAGTTTCAAAGA GGTACTGGAAGTCCGCACGAAGAATATTCAAGCATCCCGAACTCGAACCGAGAACTTCGTTTCCTCGGTATCATC CAAATCACACAGCGCCCTCGACGCACAGCGCTCAGACTCGCCTTTGTATAACACCGCGGGACGACGGACACCTCA GCCCGGATATCAAGGCAACTCCTCCGACCTTTTGACCCTCGAGCCCTCAAACCCTTCGCCATTGGGGCGTCCGTC CTTCCAATCAGATCAACAACTGATGGTAATGGAAGAAGGAGAATCGAGTAATACATATGTTCAAGCTCGAGGCGA AGCCATCGAAGCCATTGAGCGAACTATCAGCGAATTGGGTGGCATTTTTGGTCAGCTGGCGCAGATGGTTAGCGA ACAGTCAGAAATGATTCAACGCATAGATGCCAATACCGAAGATGTGGTCGACAACGTCCAGGGAGCACAGAGAGA ACTAATGAAGTATTGGACGCGTGTCTCCGGCAATCGCTGGCTCATTGCCAAAATGTTTGGTATTCTGATGGTATG TTCACTCATTAAATTTCTTGTCTGCTCATACTAATGACCGTTATAGATTTTCTTCCTTCTCTGGGTCCTGATTTC GTGA |