Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g1061.t1
Gene name
Location	scaffold_01:2814841..2815759
Strand	+
Gene length (bp)	918
Transcript length (bp)	918
Coding sequence length (bp)	918
Protein length (aa)	306

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07500	TFIIS_M	Transcription factor S-II (TFIIS), central domain	7.3E-28	145	252
PF01096	TFIIS_C	Transcription factor S-II (TFIIS)	1.8E-17	267	304
PF08711	Med26	TFIIS helical bundle-like domain	3.1E-10	32	79

GO

GO Term	Description	Terminal node
GO:0008270	zinc ion binding	Yes
GO:0006351	transcription, DNA-templated	Yes
GO:0003676	nucleic acid binding	Yes
GO:0005634	nucleus	Yes
GO:0071704	organic substance metabolic process	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0009987	cellular process	No
GO:0043170	macromolecule metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No
GO:0046872	metal ion binding	No
GO:0097659	nucleic acid-templated transcription	No
GO:0044260	cellular macromolecule metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0043226	organelle	No
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0090304	nucleic acid metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0043227	membrane-bounded organelle	No
GO:0044464	cell part	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0016070	RNA metabolic process	No
GO:0043169	cation binding	No
GO:0005488	binding	No
GO:0044424	intracellular part	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0009058	biosynthetic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0019438	aromatic compound biosynthetic process	No
GO:0043167	ion binding	No
GO:1901576	organic substance biosynthetic process	No
GO:0034654	nucleobase-containing compound biosynthetic process	No
GO:0003674	molecular_function	No
GO:0008150	biological_process	No
GO:0008152	metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0005575	cellular_component	No
GO:0043229	intracellular organelle	No
GO:0032774	RNA biosynthetic process	No
GO:0018130	heterocycle biosynthetic process	No
GO:0046914	transition metal ion binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 42	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
Transcription factor TFIIS

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1061.t1 MAMDAKEIEAKAKALGKAATSNESPAVIIGLLKDIQSGVRATEDLLRQTRIGIIVNKFKQSKTPEVARLSSEIVS KWRTEVNKQKQAGSAAGRGSSGSPRPAHNGTGASTPATATPSDKASKLSVPPDKRTWKADGADINHTGNRVRDSC TGLMYDGLCVGSTESPKVVLARAIAVEISAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVVEGEITAEQF VRMSHDELRSVEQREADAKIQKENMDKAMVAQQERSISKSLQCGKCGQRKVTYTEAQTRAADEPMTLFCTCLHCG KSWRQ*
Coding	>Pro_DTO377G3_2\|g1061.t1 ATGGCGATGGACGCTAAAGAGATCGAAGCTAAGGCCAAAGCCTTGGGCAAGGCCGCGACTTCGAACGAGTCGCCA GCTGTGATTATCGGCCTCCTGAAGGACATCCAAAGCGGCGTGCGGGCAACCGAAGACCTCCTCCGACAGACGCGC ATCGGAATCATCGTCAACAAGTTCAAGCAGAGCAAGACCCCAGAAGTCGCGCGGCTCTCCAGCGAGATTGTTTCC AAGTGGCGGACGGAGGTGAACAAGCAGAAGCAGGCTGGTTCGGCAGCCGGTCGTGGTTCGAGCGGCTCTCCGCGG CCAGCGCACAACGGTACAGGAGCGTCCACTCCAGCCACTGCGACACCCTCAGACAAGGCGTCGAAGCTGTCTGTG CCTCCGGATAAGCGAACATGGAAGGCAGACGGGGCGGATATCAATCATACCGGGAACCGAGTGCGTGACAGCTGC ACGGGGCTGATGTACGATGGACTGTGTGTGGGGTCGACCGAGTCTCCCAAGGTCGTTCTAGCACGCGCTATTGCG GTGGAGATTTCTGCCTACAAGTACCTGGGGCCGGAGACGAAGGAGGAATACCGTACGAAGATCCGTAGTCTTTTC CAGAATCTGAAGAACAAGTCCAACCCGAAGCTGCGTGTGCGCGTTGTCGAGGGAGAGATTACTGCTGAGCAATTC GTGCGCATGAGCCACGATGAGCTGCGCTCTGTTGAGCAGCGTGAGGCGGACGCTAAGATTCAGAAGGAGAATATG GACAAGGCTATGGTTGCGCAGCAGGAACGCAGTATCAGTAAGAGCTTGCAGTGCGGCAAGTGTGGCCAGCGCAAG GTTACCTACACCGAAGCTCAGACTCGTGCGGCTGATGAACCGATGACCCTGTTCTGTACATGTCTGCACTGCGGC AAGTCCTGGCGGCAGTGA
Transcript	>Pro_DTO377G3_2\|g1061.t1 ATGGCGATGGACGCTAAAGAGATCGAAGCTAAGGCCAAAGCCTTGGGCAAGGCCGCGACTTCGAACGAGTCGCCA GCTGTGATTATCGGCCTCCTGAAGGACATCCAAAGCGGCGTGCGGGCAACCGAAGACCTCCTCCGACAGACGCGC ATCGGAATCATCGTCAACAAGTTCAAGCAGAGCAAGACCCCAGAAGTCGCGCGGCTCTCCAGCGAGATTGTTTCC AAGTGGCGGACGGAGGTGAACAAGCAGAAGCAGGCTGGTTCGGCAGCCGGTCGTGGTTCGAGCGGCTCTCCGCGG CCAGCGCACAACGGTACAGGAGCGTCCACTCCAGCCACTGCGACACCCTCAGACAAGGCGTCGAAGCTGTCTGTG CCTCCGGATAAGCGAACATGGAAGGCAGACGGGGCGGATATCAATCATACCGGGAACCGAGTGCGTGACAGCTGC ACGGGGCTGATGTACGATGGACTGTGTGTGGGGTCGACCGAGTCTCCCAAGGTCGTTCTAGCACGCGCTATTGCG GTGGAGATTTCTGCCTACAAGTACCTGGGGCCGGAGACGAAGGAGGAATACCGTACGAAGATCCGTAGTCTTTTC CAGAATCTGAAGAACAAGTCCAACCCGAAGCTGCGTGTGCGCGTTGTCGAGGGAGAGATTACTGCTGAGCAATTC GTGCGCATGAGCCACGATGAGCTGCGCTCTGTTGAGCAGCGTGAGGCGGACGCTAAGATTCAGAAGGAGAATATG GACAAGGCTATGGTTGCGCAGCAGGAACGCAGTATCAGTAAGAGCTTGCAGTGCGGCAAGTGTGGCCAGCGCAAG GTTACCTACACCGAAGCTCAGACTCGTGCGGCTGATGAACCGATGACCCTGTTCTGTACATGTCTGCACTGCGGC AAGTCCTGGCGGCAGTGA
Gene	>Pro_DTO377G3_2\|g1061.t1 ATGGCGATGGACGCTAAAGAGATCGAAGCTAAGGCCAAAGCCTTGGGCAAGGCCGCGACTTCGAACGAGTCGCCA GCTGTGATTATCGGCCTCCTGAAGGACATCCAAAGCGGCGTGCGGGCAACCGAAGACCTCCTCCGACAGACGCGC ATCGGAATCATCGTCAACAAGTTCAAGCAGAGCAAGACCCCAGAAGTCGCGCGGCTCTCCAGCGAGATTGTTTCC AAGTGGCGGACGGAGGTGAACAAGCAGAAGCAGGCTGGTTCGGCAGCCGGTCGTGGTTCGAGCGGCTCTCCGCGG CCAGCGCACAACGGTACAGGAGCGTCCACTCCAGCCACTGCGACACCCTCAGACAAGGCGTCGAAGCTGTCTGTG CCTCCGGATAAGCGAACATGGAAGGCAGACGGGGCGGATATCAATCATACCGGGAACCGAGTGCGTGACAGCTGC ACGGGGCTGATGTACGATGGACTGTGTGTGGGGTCGACCGAGTCTCCCAAGGTCGTTCTAGCACGCGCTATTGCG GTGGAGATTTCTGCCTACAAGTACCTGGGGCCGGAGACGAAGGAGGAATACCGTACGAAGATCCGTAGTCTTTTC CAGAATCTGAAGAACAAGTCCAACCCGAAGCTGCGTGTGCGCGTTGTCGAGGGAGAGATTACTGCTGAGCAATTC GTGCGCATGAGCCACGATGAGCTGCGCTCTGTTGAGCAGCGTGAGGCGGACGCTAAGATTCAGAAGGAGAATATG GACAAGGCTATGGTTGCGCAGCAGGAACGCAGTATCAGTAAGAGCTTGCAGTGCGGCAAGTGTGGCCAGCGCAAG GTTACCTACACCGAAGCTCAGACTCGTGCGGCTGATGAACCGATGACCCTGTTCTGTACATGTCTGCACTGCGGC AAGTCCTGGCGGCAGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences