Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1055.t1
Gene name
Locationscaffold_01:2803213..2803969
Strand-
Gene length (bp)756
Transcript length (bp)756
Coding sequence length (bp)756
Protein length (aa) 252

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04299 FMN_bind_2 Putative FMN-binding domain 1.7E-55 1 202

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
UAF complex subunit Rrn10

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1055.t1
MFFQSAHEEKDKEALLHFIRHNPLGVLITGMNSSQQDFLQCTHAPFVVDFPEETGKTDAYLRAHIAKQNPQVKSM
MEAVDDKPPNVLELDDDVLVLFNGKYEHYVTPKFYVETKPDTGRVVPTWNYSAVQAYGKMSLYYDSKTPETGAFL
AKQLHDLSQHSERSMGYTGGDKPEPWEVSDAPTSYTDLLKKNIVGIEIRITKLQGKFKMSQEMRPGDREGVIQGF
AKLGDDASVAISNLVKERGELHDAKK*
Coding >Pro_DTO377G3_2|g1055.t1
ATGTTCTTCCAAAGCGCCCACGAGGAGAAGGACAAAGAGGCCTTGCTCCATTTCATCCGGCATAACCCACTCGGG
GTCTTGATCACCGGCATGAACTCCTCCCAGCAAGACTTCCTACAGTGCACCCATGCCCCATTCGTGGTGGATTTC
CCCGAGGAAACAGGCAAGACAGACGCCTATCTCCGCGCCCACATCGCCAAGCAGAATCCACAAGTCAAGTCAATG
ATGGAGGCCGTGGATGACAAGCCACCGAACGTTCTCGAACTCGACGACGACGTCCTAGTGCTCTTCAATGGCAAA
TACGAGCACTACGTGACTCCGAAATTCTACGTCGAGACAAAGCCAGATACCGGGAGGGTTGTGCCTACATGGAAT
TACTCCGCCGTCCAGGCGTACGGCAAGATGTCGCTATACTATGATTCCAAAACACCCGAGACTGGCGCATTTCTC
GCCAAGCAGCTGCATGATCTGTCGCAGCATTCGGAGAGGTCGATGGGGTATACTGGTGGTGATAAACCGGAGCCG
TGGGAGGTATCTGATGCGCCTACGTCGTACACTGATCTCCTGAAGAAAAACATTGTTGGAATTGAGATTCGGATC
ACCAAGCTTCAGGGGAAGTTCAAGATGAGCCAGGAAATGCGTCCTGGGGATCGTGAGGGTGTGATTCAGGGATTC
GCGAAGTTGGGGGATGATGCCAGCGTTGCGATTTCGAATCTAGTGAAAGAGCGAGGTGAATTGCATGATGCAAAG
AAGTAA
Transcript >Pro_DTO377G3_2|g1055.t1
ATGTTCTTCCAAAGCGCCCACGAGGAGAAGGACAAAGAGGCCTTGCTCCATTTCATCCGGCATAACCCACTCGGG
GTCTTGATCACCGGCATGAACTCCTCCCAGCAAGACTTCCTACAGTGCACCCATGCCCCATTCGTGGTGGATTTC
CCCGAGGAAACAGGCAAGACAGACGCCTATCTCCGCGCCCACATCGCCAAGCAGAATCCACAAGTCAAGTCAATG
ATGGAGGCCGTGGATGACAAGCCACCGAACGTTCTCGAACTCGACGACGACGTCCTAGTGCTCTTCAATGGCAAA
TACGAGCACTACGTGACTCCGAAATTCTACGTCGAGACAAAGCCAGATACCGGGAGGGTTGTGCCTACATGGAAT
TACTCCGCCGTCCAGGCGTACGGCAAGATGTCGCTATACTATGATTCCAAAACACCCGAGACTGGCGCATTTCTC
GCCAAGCAGCTGCATGATCTGTCGCAGCATTCGGAGAGGTCGATGGGGTATACTGGTGGTGATAAACCGGAGCCG
TGGGAGGTATCTGATGCGCCTACGTCGTACACTGATCTCCTGAAGAAAAACATTGTTGGAATTGAGATTCGGATC
ACCAAGCTTCAGGGGAAGTTCAAGATGAGCCAGGAAATGCGTCCTGGGGATCGTGAGGGTGTGATTCAGGGATTC
GCGAAGTTGGGGGATGATGCCAGCGTTGCGATTTCGAATCTAGTGAAAGAGCGAGGTGAATTGCATGATGCAAAG
AAGTAA
Gene >Pro_DTO377G3_2|g1055.t1
ATGTTCTTCCAAAGCGCCCACGAGGAGAAGGACAAAGAGGCCTTGCTCCATTTCATCCGGCATAACCCACTCGGG
GTCTTGATCACCGGCATGAACTCCTCCCAGCAAGACTTCCTACAGTGCACCCATGCCCCATTCGTGGTGGATTTC
CCCGAGGAAACAGGCAAGACAGACGCCTATCTCCGCGCCCACATCGCCAAGCAGAATCCACAAGTCAAGTCAATG
ATGGAGGCCGTGGATGACAAGCCACCGAACGTTCTCGAACTCGACGACGACGTCCTAGTGCTCTTCAATGGCAAA
TACGAGCACTACGTGACTCCGAAATTCTACGTCGAGACAAAGCCAGATACCGGGAGGGTTGTGCCTACATGGAAT
TACTCCGCCGTCCAGGCGTACGGCAAGATGTCGCTATACTATGATTCCAAAACACCCGAGACTGGCGCATTTCTC
GCCAAGCAGCTGCATGATCTGTCGCAGCATTCGGAGAGGTCGATGGGGTATACTGGTGGTGATAAACCGGAGCCG
TGGGAGGTATCTGATGCGCCTACGTCGTACACTGATCTCCTGAAGAAAAACATTGTTGGAATTGAGATTCGGATC
ACCAAGCTTCAGGGGAAGTTCAAGATGAGCCAGGAAATGCGTCCTGGGGATCGTGAGGGTGTGATTCAGGGATTC
GCGAAGTTGGGGGATGATGCCAGCGTTGCGATTTCGAATCTAGTGAAAGAGCGAGGTGAATTGCATGATGCAAAG
AAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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