Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g1041.t1
Gene name
Location	scaffold_01:2774825..2776208
Strand	+
Gene length (bp)	1383
Transcript length (bp)	1383
Coding sequence length (bp)	1383
Protein length (aa)	461

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03198	Glyco_hydro_72	Glucanosyltransferase	1.6E-135	29	331

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 24	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	437	459	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1041.t1 MKSTVASMATAITLGASTVLGAATNLQARSSDITPITVKGNAFFKGSDRFYMRGVDYQPGGSSNLTDPIADADGC KRDIKYFKELGLNTIRVYSVDNSQDHDECMTALADAGIYLVLDVNTPKYSINRAEPEMSYNDVYLQYIFATIEMF AKYDNTLAFFSGNEVINDGPSSKAAPYVKAVTRDMRTYLRSRKLRSVPVGYSAADVDTNRLEMAEYMNCGTDDER SDFFAFNDYSWCDPSSFTTSGWDQKVKNFTGYGLPLFLSEYGCNINTRKFEEVKSLYSTEMTPVYSGGLVYEYTE AGNKYGLVTVSGDSVTTNSDYKALKTAFDDTKNPTGNGGYNSTGGASGCPKMQKPNWDVDTDALPAMPSPAKKYL TAGAGKGDGFAGKGSQNSGTKSTTTATQGSGDVAAATSGSTTSATSTSSTGAAPSLKPFQFSFAPATVGLVTVVS AVFGASFILL*
Coding	>Pro_DTO377G3_2\|g1041.t1 ATGAAGTCCACAGTAGCTTCCATGGCCACGGCCATCACCTTGGGTGCCTCGACCGTCCTTGGTGCCGCAACCAAC CTCCAGGCCCGTAGCAGTGATATCACTCCGATCACTGTCAAGGGTAACGCCTTCTTCAAGGGCAGCGACCGGTTC TACATGCGCGGTGTCGACTACCAGCCCGGTGGTTCTTCCAACCTGACCGATCCTATCGCTGATGCCGATGGGTGC AAGCGTGACATCAAGTACTTCAAGGAATTGGGCCTGAACACTATCCGTGTCTACTCCGTCGATAATTCTCAGGAC CACGACGAGTGCATGACTGCCCTCGCTGATGCCGGCATCTACCTCGTTCTCGATGTCAACACCCCCAAGTACTCC ATCAACCGTGCCGAGCCTGAGATGTCCTACAACGATGTCTATCTTCAGTACATCTTCGCCACCATCGAGATGTTC GCCAAGTACGACAACACCTTGGCCTTCTTCTCTGGTAACGAGGTCATCAACGACGGTCCCTCCTCCAAGGCTGCT CCCTACGTCAAGGCTGTCACCCGTGATATGCGCACTTACCTCCGCTCTCGCAAGCTCCGCTCCGTCCCTGTCGGA TACTCCGCCGCCGATGTCGACACCAACCGTCTCGAGATGGCCGAGTACATGAACTGCGGTACCGATGACGAGCGC AGTGACTTCTTCGCCTTCAACGACTACTCCTGGTGTGACCCCTCTTCCTTCACCACCTCCGGCTGGGACCAGAAG GTGAAGAACTTCACTGGCTACGGACTTCCCCTCTTCCTTTCCGAGTACGGCTGCAACATCAACACCCGCAAGTTC GAGGAGGTCAAGTCTCTCTACTCCACCGAGATGACTCCGGTCTACTCTGGCGGTCTGGTCTACGAGTACACCGAG GCGGGCAACAAGTACGGCTTGGTTACTGTCTCTGGTGACTCCGTTACTACCAACTCCGATTACAAGGCTCTCAAG ACTGCCTTCGATGACACCAAGAACCCCACTGGCAACGGCGGCTACAACTCCACCGGTGGTGCCTCCGGTTGCCCT AAGATGCAGAAGCCTAACTGGGACGTCGACACTGATGCTCTCCCTGCCATGCCCTCCCCTGCCAAGAAGTACCTG ACCGCAGGTGCCGGCAAGGGCGATGGATTCGCCGGCAAGGGCAGCCAGAACTCCGGCACCAAGTCCACCACCACT GCCACCCAGGGCTCCGGTGACGTCGCTGCTGCCACTAGCGGTTCCACTACTTCTGCTACTAGCACCAGCTCCACT GGTGCTGCCCCCAGCCTCAAGCCTTTCCAGTTCAGCTTCGCCCCCGCTACCGTCGGCCTAGTCACTGTCGTGTCG GCTGTCTTTGGCGCTAGCTTCATCCTTCTGTAA
Transcript	>Pro_DTO377G3_2\|g1041.t1 ATGAAGTCCACAGTAGCTTCCATGGCCACGGCCATCACCTTGGGTGCCTCGACCGTCCTTGGTGCCGCAACCAAC CTCCAGGCCCGTAGCAGTGATATCACTCCGATCACTGTCAAGGGTAACGCCTTCTTCAAGGGCAGCGACCGGTTC TACATGCGCGGTGTCGACTACCAGCCCGGTGGTTCTTCCAACCTGACCGATCCTATCGCTGATGCCGATGGGTGC AAGCGTGACATCAAGTACTTCAAGGAATTGGGCCTGAACACTATCCGTGTCTACTCCGTCGATAATTCTCAGGAC CACGACGAGTGCATGACTGCCCTCGCTGATGCCGGCATCTACCTCGTTCTCGATGTCAACACCCCCAAGTACTCC ATCAACCGTGCCGAGCCTGAGATGTCCTACAACGATGTCTATCTTCAGTACATCTTCGCCACCATCGAGATGTTC GCCAAGTACGACAACACCTTGGCCTTCTTCTCTGGTAACGAGGTCATCAACGACGGTCCCTCCTCCAAGGCTGCT CCCTACGTCAAGGCTGTCACCCGTGATATGCGCACTTACCTCCGCTCTCGCAAGCTCCGCTCCGTCCCTGTCGGA TACTCCGCCGCCGATGTCGACACCAACCGTCTCGAGATGGCCGAGTACATGAACTGCGGTACCGATGACGAGCGC AGTGACTTCTTCGCCTTCAACGACTACTCCTGGTGTGACCCCTCTTCCTTCACCACCTCCGGCTGGGACCAGAAG GTGAAGAACTTCACTGGCTACGGACTTCCCCTCTTCCTTTCCGAGTACGGCTGCAACATCAACACCCGCAAGTTC GAGGAGGTCAAGTCTCTCTACTCCACCGAGATGACTCCGGTCTACTCTGGCGGTCTGGTCTACGAGTACACCGAG GCGGGCAACAAGTACGGCTTGGTTACTGTCTCTGGTGACTCCGTTACTACCAACTCCGATTACAAGGCTCTCAAG ACTGCCTTCGATGACACCAAGAACCCCACTGGCAACGGCGGCTACAACTCCACCGGTGGTGCCTCCGGTTGCCCT AAGATGCAGAAGCCTAACTGGGACGTCGACACTGATGCTCTCCCTGCCATGCCCTCCCCTGCCAAGAAGTACCTG ACCGCAGGTGCCGGCAAGGGCGATGGATTCGCCGGCAAGGGCAGCCAGAACTCCGGCACCAAGTCCACCACCACT GCCACCCAGGGCTCCGGTGACGTCGCTGCTGCCACTAGCGGTTCCACTACTTCTGCTACTAGCACCAGCTCCACT GGTGCTGCCCCCAGCCTCAAGCCTTTCCAGTTCAGCTTCGCCCCCGCTACCGTCGGCCTAGTCACTGTCGTGTCG GCTGTCTTTGGCGCTAGCTTCATCCTTCTGTAA
Gene	>Pro_DTO377G3_2\|g1041.t1 ATGAAGTCCACAGTAGCTTCCATGGCCACGGCCATCACCTTGGGTGCCTCGACCGTCCTTGGTGCCGCAACCAAC CTCCAGGCCCGTAGCAGTGATATCACTCCGATCACTGTCAAGGGTAACGCCTTCTTCAAGGGCAGCGACCGGTTC TACATGCGCGGTGTCGACTACCAGCCCGGTGGTTCTTCCAACCTGACCGATCCTATCGCTGATGCCGATGGGTGC AAGCGTGACATCAAGTACTTCAAGGAATTGGGCCTGAACACTATCCGTGTCTACTCCGTCGATAATTCTCAGGAC CACGACGAGTGCATGACTGCCCTCGCTGATGCCGGCATCTACCTCGTTCTCGATGTCAACACCCCCAAGTACTCC ATCAACCGTGCCGAGCCTGAGATGTCCTACAACGATGTCTATCTTCAGTACATCTTCGCCACCATCGAGATGTTC GCCAAGTACGACAACACCTTGGCCTTCTTCTCTGGTAACGAGGTCATCAACGACGGTCCCTCCTCCAAGGCTGCT CCCTACGTCAAGGCTGTCACCCGTGATATGCGCACTTACCTCCGCTCTCGCAAGCTCCGCTCCGTCCCTGTCGGA TACTCCGCCGCCGATGTCGACACCAACCGTCTCGAGATGGCCGAGTACATGAACTGCGGTACCGATGACGAGCGC AGTGACTTCTTCGCCTTCAACGACTACTCCTGGTGTGACCCCTCTTCCTTCACCACCTCCGGCTGGGACCAGAAG GTGAAGAACTTCACTGGCTACGGACTTCCCCTCTTCCTTTCCGAGTACGGCTGCAACATCAACACCCGCAAGTTC GAGGAGGTCAAGTCTCTCTACTCCACCGAGATGACTCCGGTCTACTCTGGCGGTCTGGTCTACGAGTACACCGAG GCGGGCAACAAGTACGGCTTGGTTACTGTCTCTGGTGACTCCGTTACTACCAACTCCGATTACAAGGCTCTCAAG ACTGCCTTCGATGACACCAAGAACCCCACTGGCAACGGCGGCTACAACTCCACCGGTGGTGCCTCCGGTTGCCCT AAGATGCAGAAGCCTAACTGGGACGTCGACACTGATGCTCTCCCTGCCATGCCCTCCCCTGCCAAGAAGTACCTG ACCGCAGGTGCCGGCAAGGGCGATGGATTCGCCGGCAAGGGCAGCCAGAACTCCGGCACCAAGTCCACCACCACT GCCACCCAGGGCTCCGGTGACGTCGCTGCTGCCACTAGCGGTTCCACTACTTCTGCTACTAGCACCAGCTCCACT GGTGCTGCCCCCAGCCTCAAGCCTTTCCAGTTCAGCTTCGCCCCCGCTACCGTCGGCCTAGTCACTGTCGTGTCG GCTGTCTTTGGCGCTAGCTTCATCCTTCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail