Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g1036.t1
Gene name
Location	scaffold_01:2763105..2764515
Strand	-
Gene length (bp)	1410
Transcript length (bp)	1410
Coding sequence length (bp)	1410
Protein length (aa)	470

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00730	HhH-GPD	HhH-GPD superfamily base excision DNA repair protein	1.4E-19	242	402
PF00633	HHH	Helix-hairpin-helix motif	7.1E-08	333	360

GO

GO Term	Description	Terminal node
GO:0003677	DNA binding	Yes
GO:0006284	base-excision repair	Yes
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0046483	heterocycle metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0097159	organic cyclic compound binding	No
GO:0071704	organic substance metabolic process	No
GO:0006281	DNA repair	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0033554	cellular response to stress	No
GO:0006950	response to stress	No
GO:0044238	primary metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0009987	cellular process	No
GO:0044237	cellular metabolic process	No
GO:0006974	cellular response to DNA damage stimulus	No
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0051716	cellular response to stimulus	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0006259	DNA metabolic process	No
GO:0005488	binding	No
GO:0050896	response to stimulus	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1036.t1 MRTSRTSKDTAKVLQALSPPIRRQTRSCNVSALKSFAYNPNATPTVKIEPETVSVTPSWSAVKSEDESSLSELSD LSEADTADIEDLLEPPTKRQRRNASLITTRVLKQSASPGKLQKVIVKDEPDQKPTPARRPPARKTRDEDGSVKIE PPSNSETMYNIVKDEPDQKPTPAPKQRRLPARKTRDEDGSVKVEPPSNWETMYNIVKEMRANNPTAPVDTMGCSE LYWRASSPRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGDGSSPALDIKVKQENEDSKPTDSTLNLTNILAV DPTRLNELIRTVGFHNNKTKYIKATALILRDQYGGDIPSTPEGLMALPGVGPKMAYLCLSAAWGKHLGIGVDVHV HRITNLWGWNKTKTPEETRKALQSWLPHEKWHEINKLLVGLGQTVCLPVKRRCGDCDLAGLGLCKSEIRGLEPTV KKVKSSPAVDEPKVKIEAL*
Coding	>Pro_DTO377G3_2\|g1036.t1 ATGCGCACTTCTCGCACTTCAAAAGACACGGCGAAGGTGCTGCAGGCCCTCTCGCCCCCTATCCGACGACAGACG CGTAGCTGCAATGTCAGCGCTTTGAAAAGTTTCGCCTACAACCCAAACGCGACTCCGACCGTGAAGATAGAACCA GAAACTGTCTCGGTGACTCCGAGTTGGTCTGCCGTCAAAAGTGAGGATGAATCTTCGCTCTCCGAGCTCTCCGAT CTCTCTGAGGCCGACACGGCCGACATCGAAGACCTCCTTGAACCACCAACGAAGCGCCAAAGGCGCAACGCGAGC CTCATAACCACACGCGTCCTCAAACAGAGCGCAAGTCCTGGCAAACTACAAAAGGTCATAGTGAAGGATGAGCCT GATCAGAAACCAACACCGGCAAGACGACCCCCTGCCCGAAAGACCCGCGACGAAGATGGCTCGGTCAAGATCGAA CCCCCGTCCAATTCGGAGACGATGTACAATATCGTGAAGGATGAGCCCGATCAGAAACCAACACCAGCACCCAAA CAAAGACGACTCCCCGCCCGAAAAACCCGCGACGAAGATGGCTCAGTCAAGGTCGAGCCCCCGTCCAACTGGGAG ACGATGTACAACATCGTGAAAGAAATGAGGGCAAACAACCCAACTGCACCGGTAGACACAATGGGCTGCTCAGAG CTATACTGGCGCGCGTCATCGCCAAGAGATCGTCGGTTCCAGACCCTCATCGCACTGATGCTCTCATCCCAGACA AAAGACACAGTCACGGCAGTAGCGATGCAACGTCTTCACACCGAGCTCGGAGATGGCAGCTCCCCAGCCCTAGAC ATCAAAGTCAAACAAGAGAACGAGGATTCAAAACCCACCGACAGCACCCTCAACCTAACCAACATCCTAGCCGTG GACCCAACGCGACTAAACGAATTAATCCGCACAGTCGGCTTCCACAACAACAAAACAAAATACATCAAAGCTACC GCCCTGATCTTGCGAGACCAGTACGGCGGGGATATCCCCTCGACTCCAGAGGGTCTCATGGCACTCCCCGGCGTA GGGCCCAAAATGGCTTACCTCTGTCTGAGCGCGGCATGGGGTAAACACTTGGGAATTGGTGTCGATGTGCATGTT CATCGCATTACCAATCTCTGGGGTTGGAATAAAACTAAGACGCCGGAGGAGACGAGGAAGGCGCTGCAGTCGTGG TTGCCACATGAGAAATGGCATGAGATCAATAAGTTGCTTGTTGGGCTTGGGCAGACGGTTTGCTTGCCCGTTAAA CGTCGCTGCGGGGATTGTGATCTGGCGGGTTTGGGACTTTGTAAGAGCGAGATTCGAGGGCTTGAGCCGACAGTG AAGAAGGTGAAAAGCAGTCCCGCGGTTGATGAGCCGAAGGTCAAAATCGAGGCTCTTTGA
Transcript	>Pro_DTO377G3_2\|g1036.t1 ATGCGCACTTCTCGCACTTCAAAAGACACGGCGAAGGTGCTGCAGGCCCTCTCGCCCCCTATCCGACGACAGACG CGTAGCTGCAATGTCAGCGCTTTGAAAAGTTTCGCCTACAACCCAAACGCGACTCCGACCGTGAAGATAGAACCA GAAACTGTCTCGGTGACTCCGAGTTGGTCTGCCGTCAAAAGTGAGGATGAATCTTCGCTCTCCGAGCTCTCCGAT CTCTCTGAGGCCGACACGGCCGACATCGAAGACCTCCTTGAACCACCAACGAAGCGCCAAAGGCGCAACGCGAGC CTCATAACCACACGCGTCCTCAAACAGAGCGCAAGTCCTGGCAAACTACAAAAGGTCATAGTGAAGGATGAGCCT GATCAGAAACCAACACCGGCAAGACGACCCCCTGCCCGAAAGACCCGCGACGAAGATGGCTCGGTCAAGATCGAA CCCCCGTCCAATTCGGAGACGATGTACAATATCGTGAAGGATGAGCCCGATCAGAAACCAACACCAGCACCCAAA CAAAGACGACTCCCCGCCCGAAAAACCCGCGACGAAGATGGCTCAGTCAAGGTCGAGCCCCCGTCCAACTGGGAG ACGATGTACAACATCGTGAAAGAAATGAGGGCAAACAACCCAACTGCACCGGTAGACACAATGGGCTGCTCAGAG CTATACTGGCGCGCGTCATCGCCAAGAGATCGTCGGTTCCAGACCCTCATCGCACTGATGCTCTCATCCCAGACA AAAGACACAGTCACGGCAGTAGCGATGCAACGTCTTCACACCGAGCTCGGAGATGGCAGCTCCCCAGCCCTAGAC ATCAAAGTCAAACAAGAGAACGAGGATTCAAAACCCACCGACAGCACCCTCAACCTAACCAACATCCTAGCCGTG GACCCAACGCGACTAAACGAATTAATCCGCACAGTCGGCTTCCACAACAACAAAACAAAATACATCAAAGCTACC GCCCTGATCTTGCGAGACCAGTACGGCGGGGATATCCCCTCGACTCCAGAGGGTCTCATGGCACTCCCCGGCGTA GGGCCCAAAATGGCTTACCTCTGTCTGAGCGCGGCATGGGGTAAACACTTGGGAATTGGTGTCGATGTGCATGTT CATCGCATTACCAATCTCTGGGGTTGGAATAAAACTAAGACGCCGGAGGAGACGAGGAAGGCGCTGCAGTCGTGG TTGCCACATGAGAAATGGCATGAGATCAATAAGTTGCTTGTTGGGCTTGGGCAGACGGTTTGCTTGCCCGTTAAA CGTCGCTGCGGGGATTGTGATCTGGCGGGTTTGGGACTTTGTAAGAGCGAGATTCGAGGGCTTGAGCCGACAGTG AAGAAGGTGAAAAGCAGTCCCGCGGTTGATGAGCCGAAGGTCAAAATCGAGGCTCTTTGA
Gene	>Pro_DTO377G3_2\|g1036.t1 ATGCGCACTTCTCGCACTTCAAAAGACACGGCGAAGGTGCTGCAGGCCCTCTCGCCCCCTATCCGACGACAGACG CGTAGCTGCAATGTCAGCGCTTTGAAAAGTTTCGCCTACAACCCAAACGCGACTCCGACCGTGAAGATAGAACCA GAAACTGTCTCGGTGACTCCGAGTTGGTCTGCCGTCAAAAGTGAGGATGAATCTTCGCTCTCCGAGCTCTCCGAT CTCTCTGAGGCCGACACGGCCGACATCGAAGACCTCCTTGAACCACCAACGAAGCGCCAAAGGCGCAACGCGAGC CTCATAACCACACGCGTCCTCAAACAGAGCGCAAGTCCTGGCAAACTACAAAAGGTCATAGTGAAGGATGAGCCT GATCAGAAACCAACACCGGCAAGACGACCCCCTGCCCGAAAGACCCGCGACGAAGATGGCTCGGTCAAGATCGAA CCCCCGTCCAATTCGGAGACGATGTACAATATCGTGAAGGATGAGCCCGATCAGAAACCAACACCAGCACCCAAA CAAAGACGACTCCCCGCCCGAAAAACCCGCGACGAAGATGGCTCAGTCAAGGTCGAGCCCCCGTCCAACTGGGAG ACGATGTACAACATCGTGAAAGAAATGAGGGCAAACAACCCAACTGCACCGGTAGACACAATGGGCTGCTCAGAG CTATACTGGCGCGCGTCATCGCCAAGAGATCGTCGGTTCCAGACCCTCATCGCACTGATGCTCTCATCCCAGACA AAAGACACAGTCACGGCAGTAGCGATGCAACGTCTTCACACCGAGCTCGGAGATGGCAGCTCCCCAGCCCTAGAC ATCAAAGTCAAACAAGAGAACGAGGATTCAAAACCCACCGACAGCACCCTCAACCTAACCAACATCCTAGCCGTG GACCCAACGCGACTAAACGAATTAATCCGCACAGTCGGCTTCCACAACAACAAAACAAAATACATCAAAGCTACC GCCCTGATCTTGCGAGACCAGTACGGCGGGGATATCCCCTCGACTCCAGAGGGTCTCATGGCACTCCCCGGCGTA GGGCCCAAAATGGCTTACCTCTGTCTGAGCGCGGCATGGGGTAAACACTTGGGAATTGGTGTCGATGTGCATGTT CATCGCATTACCAATCTCTGGGGTTGGAATAAAACTAAGACGCCGGAGGAGACGAGGAAGGCGCTGCAGTCGTGG TTGCCACATGAGAAATGGCATGAGATCAATAAGTTGCTTGTTGGGCTTGGGCAGACGGTTTGCTTGCCCGTTAAA CGTCGCTGCGGGGATTGTGATCTGGCGGGTTTGGGACTTTGTAAGAGCGAGATTCGAGGGCTTGAGCCGACAGTG AAGAAGGTGAAAAGCAGTCCCGCGGTTGATGAGCCGAAGGTCAAAATCGAGGCTCTTTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences