© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1027.t1 |
| Gene name | |
| Location | scaffold_01:2739411..2740989 |
| Strand | - |
| Gene length (bp) | 1578 |
| Transcript length (bp) | 1416 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01222 | ERG4_ERG24 | Ergosterol biosynthesis ERG4/ERG24 family | 9.9E-148 | 35 | 470 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | Yes |
| GO:0016020 | membrane | Yes |
| GO:0016126 | sterol biosynthetic process | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0006694 | steroid biosynthetic process | No |
| GO:1901617 | organic hydroxy compound biosynthetic process | No |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0008152 | metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0016125 | sterol metabolic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 101 | 123 | 22 |
| 3 | 136 | 158 | 22 |
| 4 | 173 | 195 | 22 |
| 5 | 228 | 250 | 22 |
| 6 | 293 | 315 | 22 |
| 7 | 322 | 344 | 22 |
| 8 | 416 | 438 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1027.t1 MTIRQRTQPVASIPANRSKEDGSTTPTKFTDGASDEFEFGGSFGAALLMTGFPLLMWYMWIGATYYDGMLPMPKP NQTWADFGRHLCQLVYEGAYPSAKAWAIYWTFFVLEALMYCYMPGVSNFGRPLRHEGGKRLPYYCSAYCSFYATL AIAVVLHVTRVFPLYTLIDEFGPIMSVAILSGFLNSFIVYIQAIVRGRTHRLSGSPIYDFFMGAELNPRIGILDF KMFYEVRIPWFILFLITCSVAARQYETYGYVSPEVIFLVVAHYLYTNACAKAEQMIITSWDMYFEKLGFLLTFWN MAGVPFTYCHCALYLANHHPSEYHWNPYALAVFSALYIFFYWMWDSANGQKNAFRHKEKGQLIQRNTFPQVPWQA IENPKTIQTDAGDHIMVDGWFAIIRKPNYVPDMFFSMSWGLITGFKSPFPWFYFIFFMVMIIHRTNRDINRCRRK YGEAWKRYEKEVPYLFIPYVI* |
| Coding | >Pro_DTO377G3_2|g1027.t1 ATGACCATAAGACAGAGAACCCAACCGGTTGCTTCTATTCCAGCTAATAGGAGCAAGGAGGATGGATCAACTACC CCGACCAAGTTTACTGACGGTGCGTCAGATGAATTCGAATTCGGTGGTTCATTCGGTGCTGCGCTGTTGATGACG GGATTTCCTTTGTTGATGTGGTACATGTGGATCGGTGCCACGTACTATGATGGCATGCTTCCTATGCCTAAGCCC AACCAGACCTGGGCTGATTTTGGCCGTCACCTATGTCAGCTGGTCTACGAGGGAGCTTATCCAAGCGCGAAAGCC TGGGCGATATACTGGACATTCTTTGTCCTCGAGGCACTCATGTATTGCTACATGCCCGGTGTTTCGAATTTCGGC CGGCCATTGAGGCACGAAGGCGGCAAGAGGCTCCCCTACTACTGCTCCGCTTATTGCAGCTTCTATGCGACGCTC GCCATCGCTGTTGTCCTACACGTTACTCGTGTATTCCCTTTGTACACGCTGATTGACGAGTTTGGACCTATCATG AGTGTCGCTATCCTCTCTGGCTTCTTGAACAGCTTCATAGTCTACATCCAAGCTATCGTGCGCGGCCGAACCCAC AGACTATCGGGCTCTCCAATCTACGATTTCTTTATGGGCGCCGAGCTGAATCCCCGCATTGGAATCCTGGACTTC AAGATGTTTTACGAAGTCCGGATCCCGTGGTTCATTCTCTTCCTCATCACCTGCTCCGTGGCTGCTCGCCAGTAC GAAACTTACGGCTATGTTTCGCCCGAGGTAATCTTCTTGGTGGTGGCACATTACTTGTATACCAATGCGTGTGCC AAAGCTGAGCAGATGATTATTACCAGCTGGGACATGTATTTTGAAAAGCTAGGCTTTTTGCTCACCTTTTGGAAT ATGGCCGGTGTGCCCTTCACATATTGCCACTGTGCTCTCTACTTGGCCAACCACCACCCATCCGAATACCACTGG AATCCTTACGCTCTCGCAGTGTTCTCTGCTCTGTACATTTTCTTCTACTGGATGTGGGACAGTGCCAATGGTCAG AAGAATGCATTCCGCCACAAGGAAAAGGGCCAGCTCATACAACGGAACACATTCCCTCAAGTGCCGTGGCAGGCT ATCGAGAATCCCAAAACCATCCAAACGGATGCGGGCGACCATATCATGGTCGATGGCTGGTTTGCAATTATCCGA AAGCCAAACTATGTTCCTGACATGTTTTTCTCTATGTCCTGGGGTCTGATCACCGGTTTCAAGAGCCCGTTCCCT TGGTTCTACTTCATTTTCTTCATGGTTATGATCATCCATCGCACCAACAGGGATATCAACAGATGCCGAAGAAAG TACGGCGAGGCCTGGAAGCGCTACGAGAAAGAAGTCCCCTACCTGTTCATCCCATATGTCATTTAA |
| Transcript | >Pro_DTO377G3_2|g1027.t1 ATGACCATAAGACAGAGAACCCAACCGGTTGCTTCTATTCCAGCTAATAGGAGCAAGGAGGATGGATCAACTACC CCGACCAAGTTTACTGACGGTGCGTCAGATGAATTCGAATTCGGTGGTTCATTCGGTGCTGCGCTGTTGATGACG GGATTTCCTTTGTTGATGTGGTACATGTGGATCGGTGCCACGTACTATGATGGCATGCTTCCTATGCCTAAGCCC AACCAGACCTGGGCTGATTTTGGCCGTCACCTATGTCAGCTGGTCTACGAGGGAGCTTATCCAAGCGCGAAAGCC TGGGCGATATACTGGACATTCTTTGTCCTCGAGGCACTCATGTATTGCTACATGCCCGGTGTTTCGAATTTCGGC CGGCCATTGAGGCACGAAGGCGGCAAGAGGCTCCCCTACTACTGCTCCGCTTATTGCAGCTTCTATGCGACGCTC GCCATCGCTGTTGTCCTACACGTTACTCGTGTATTCCCTTTGTACACGCTGATTGACGAGTTTGGACCTATCATG AGTGTCGCTATCCTCTCTGGCTTCTTGAACAGCTTCATAGTCTACATCCAAGCTATCGTGCGCGGCCGAACCCAC AGACTATCGGGCTCTCCAATCTACGATTTCTTTATGGGCGCCGAGCTGAATCCCCGCATTGGAATCCTGGACTTC AAGATGTTTTACGAAGTCCGGATCCCGTGGTTCATTCTCTTCCTCATCACCTGCTCCGTGGCTGCTCGCCAGTAC GAAACTTACGGCTATGTTTCGCCCGAGGTAATCTTCTTGGTGGTGGCACATTACTTGTATACCAATGCGTGTGCC AAAGCTGAGCAGATGATTATTACCAGCTGGGACATGTATTTTGAAAAGCTAGGCTTTTTGCTCACCTTTTGGAAT ATGGCCGGTGTGCCCTTCACATATTGCCACTGTGCTCTCTACTTGGCCAACCACCACCCATCCGAATACCACTGG AATCCTTACGCTCTCGCAGTGTTCTCTGCTCTGTACATTTTCTTCTACTGGATGTGGGACAGTGCCAATGGTCAG AAGAATGCATTCCGCCACAAGGAAAAGGGCCAGCTCATACAACGGAACACATTCCCTCAAGTGCCGTGGCAGGCT ATCGAGAATCCCAAAACCATCCAAACGGATGCGGGCGACCATATCATGGTCGATGGCTGGTTTGCAATTATCCGA AAGCCAAACTATGTTCCTGACATGTTTTTCTCTATGTCCTGGGGTCTGATCACCGGTTTCAAGAGCCCGTTCCCT TGGTTCTACTTCATTTTCTTCATGGTTATGATCATCCATCGCACCAACAGGGATATCAACAGATGCCGAAGAAAG TACGGCGAGGCCTGGAAGCGCTACGAGAAAGAAGTCCCCTACCTGTTCATCCCATATGTCATTTAA |
| Gene | >Pro_DTO377G3_2|g1027.t1 ATGACCATAAGACAGAGAACCCAACCGGTTGCTTCTATTCCAGCTAATAGGAGCAAGGAGGATGGATCAACTACC CCGACCAAGTTTACTGACGGTGCGTCAGATGAATTCGAATTCGGTGGTTCATTCGGTGCTGCGCTGTTGATGACG GGATTTCCTTTGTTGATGTGGTACATGTGGATCGGTGCCACGTACTATGATGGCATGCTTCCTATGCCTAAGCCC AACCAGACCTGGGCTGATTTTGGCCGTCACCTATGTCAGCTGGTCTACGAGGGAGCTTATCCAAGCGCGAAAGCC TGGGCGATATACTGGACATTCTTTGTCCTCGAGGCACTCATGTATTGCTACATGCCCGGTGTTTCGAATTTCGGC CGGCCATTGAGGCACGAAGGCGGCAAGAGGCTCCCCTACTACTGCTCCGCTTATTGCAGCTTCTATGCGACGCTC GCCATCGCTGTTGTCCTACACGTTACTCGTGTATTCCCTTTGTACACGCTGATTGACGAGTTTGGACCTATCATG AGTGTCGCTATCCTCTCTGGCTTCTTGAACAGCTTCATAGTCTACATCCAAGCTATCGTGCGCGGCCGAACCCAC AGACTATCGGGCTCTCCAATCTACGATTTCTTTATGGGCGCCGAGCTGAATCCCCGCATTGGAATCCTGGACTTC AAGATGTTTTACGAAGTCCGGATCCCGTGGTTCATTCTCTTCCTCATCACCTGCTCCGTGGCTGCTCGCCAGTAC GAAACTTACGGCTATGTTTCGCCCGAGGTAATCTTCTTGGTGGTGGCACATTACTTGTATACCAATGCGTGTGCC AAAGCTGAGCAGATGATTATTACCAGCTGGTGAGTTAATAAAATGTTGGAGCAATAGTTACAATTGAGCTGACAC TATACCAGGGACATGTATTTTGAAAAGCTAGGCTTTTTGCTCACCTTTTGGAATATGGCCGGTGTGCCCTTCACA TATTGCCACTGTGCTCTCTACTTGGCCAACCACCACCCATCCGAATACCACTGGAATCCTTACGCTCTCGCAGTG TTCTCTGCTCTGTACATTTTCTTCTACTGGATGTGGGACAGTGCCAATGGTCAGAAGAATGCATTCCGCCACAAG GAAAAGGGCCAGCTCATACAACGGAACACATTCCCTCAAGTGCCGTGGCAGGCTATCGAGAATCCCAAAACCATC CAAACGGATGCGGGCGACCATATCATGGTCGATGGCTGGTTTGCAATTATCCGAAAGCCAAACTATGTTCCTGAC ATGTTTTTCTCTATGTCCTGGGGTCTGATCACCGGTTTCAAGTAAGACTTCTTATGTGCAAAGCCGTGATGTTGT GGTAACTAACTACTATTGATAGGAGCCCGTTCCCTTGGTTCTACTTCATTTTCTTCATGGTTATGATCATCCATC GCACCAACAGGGATATCAACAGATGCCGAAGAAAGTACGGCGAGGCCTGGAAGCGCTACGAGAAAGAAGTCCCCT ACCTGTTCATCCCAGTAAGTTCATAGTGCTATTCCGGGTAGTGGAGATGTGCTAACAGTTTCGAAGTATGTCATT TAA |