Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1021.t1
Gene name
Locationscaffold_01:2709043..2711036
Strand-
Gene length (bp)1993
Transcript length (bp)1803
Coding sequence length (bp)1803
Protein length (aa) 601

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02776 TPP_enzyme_N Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1.5E-33 25 194
PF02775 TPP_enzyme_C Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 2.4E-19 427 520
PF00205 TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain 2.9E-18 228 333

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0000287 magnesium ion binding Yes
GO:0030976 thiamine pyrophosphate binding Yes
GO:0097159 organic cyclic compound binding No
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0050662 coenzyme binding No
GO:0048037 cofactor binding No
GO:0019842 vitamin binding No
GO:1901681 sulfur compound binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 89 111 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1021.t1
MTELFDRPSLMPPLITPSFSPKDHNIGTLLAHRMEELGVKDFFAVPGDSNLTLLDQLLKNPSLHLIGCCNELNAG
YAADRYARSSPTKVAVVIVTFTVGSLSLLNTIAGAYSERLKIIIISGCPSSKLLTEGSLLHHTTGRASKDQALRV
FQEFTATSIRLDSSEYAALRLDEALSQCIHKSLPVYIEIPTDIVGVVGNAATPLQISPPTLIQSEAVDEIISPLI
ATWNAAHRPILIIGALARFFLSTEALIAFAEKLGCAVFCQPDAKSTLPESHPQFVGTFWAIASKPECRDIVMDAD
LWVVVGGRWSDLHTVGGLNIKEERRRMINIQETSIRMPYGRLFQDLCLANVLGAFLRSSILPKRETLLSSQWKSR
EQTRVNSPVLGEALTVRGIVDVIQQLITSKDTLIADTGDAWFNAADISLPMGANFQIQLVYASLGWSLPAALGCQ
LARPDGRTILMIGDGAFQMTAQELSTAIRSRANMIVFIFNNLGYQIESAIHDGPYNYIANWNYAKFASAMCTPKH
TRTCNDPFASQLDKDRGLNPAFFSMQIKTQADLLSALDRINLEPWKLALLECCIQPGDVSVGLRQLAGALSETVQ
*
Coding >Pro_DTO377G3_2|g1021.t1
ATGACTGAGCTATTTGACCGACCGAGCTTGATGCCACCATTGATCACCCCGAGCTTTTCACCCAAAGACCATAAT
ATCGGCACCCTCTTGGCCCATAGAATGGAAGAGCTGGGAGTTAAGGACTTCTTTGCCGTCCCAGGTGACTCAAAT
CTGACCCTGCTTGATCAGCTTTTGAAAAACCCAAGCCTACACCTTATTGGGTGCTGTAATGAGTTGAATGCTGGC
TACGCTGCAGATAGGTACGCGCGAAGTTCCCCTACCAAAGTTGCGGTTGTGATAGTCACCTTCACGGTTGGGAGC
CTATCACTGCTTAATACAATTGCAGGAGCCTATTCTGAGCGACTTAAGATCATAATTATCTCAGGCTGTCCAAGC
TCAAAATTGCTGACAGAGGGGAGTCTCCTCCATCATACGACAGGTAGAGCGAGCAAGGACCAAGCACTGCGTGTA
TTCCAAGAGTTCACGGCTACCTCAATCCGTCTGGATTCCAGTGAATATGCTGCACTCCGCCTAGATGAAGCTCTC
TCTCAGTGCATTCATAAATCACTGCCAGTCTACATTGAGATTCCCACCGATATAGTGGGGGTTGTGGGCAATGCA
GCAACTCCTTTGCAGATTTCACCGCCAACATTAATTCAATCAGAGGCCGTCGATGAAATTATATCCCCACTGATT
GCCACCTGGAATGCAGCGCACCGGCCGATTTTGATCATTGGTGCTCTGGCACGCTTCTTCCTCTCGACAGAAGCT
CTGATAGCATTTGCTGAAAAGCTGGGTTGCGCCGTCTTCTGCCAGCCGGATGCCAAATCAACGCTACCAGAGTCA
CACCCTCAGTTTGTGGGCACATTTTGGGCCATTGCTTCCAAGCCCGAATGTAGAGATATTGTGATGGACGCTGAC
CTCTGGGTGGTAGTTGGAGGCCGTTGGTCTGATTTGCACACGGTGGGAGGTCTCAATATCAAAGAGGAGCGCCGA
CGTATGATTAATATCCAGGAAACATCTATACGAATGCCGTATGGTCGATTGTTTCAAGATTTATGCCTAGCCAAT
GTTCTTGGCGCTTTTCTGCGGTCCTCAATTCTCCCCAAAAGAGAAACACTTCTTTCATCCCAATGGAAGTCGCGT
GAACAGACCAGAGTCAACAGTCCTGTACTTGGCGAAGCTCTCACAGTGCGTGGGATCGTGGATGTTATCCAACAG
CTAATTACAAGCAAAGACACCTTGATAGCTGATACGGGGGATGCTTGGTTCAATGCCGCCGATATTTCGCTCCCC
ATGGGGGCGAACTTTCAAATTCAGCTAGTTTATGCGTCTCTGGGATGGAGCCTACCTGCTGCGCTTGGCTGCCAA
CTAGCTCGCCCCGATGGGCGAACAATCCTCATGATTGGTGATGGCGCTTTTCAAATGACTGCTCAAGAGCTAAGT
ACTGCCATCCGAAGTAGAGCCAACATGATAGTCTTCATCTTCAACAATCTGGGTTATCAGATCGAGTCTGCAATT
CATGATGGACCGTATAATTACATCGCCAATTGGAACTATGCCAAATTCGCTTCCGCCATGTGTACACCCAAGCAT
ACAAGAACATGCAACGACCCGTTCGCATCTCAATTGGACAAAGACCGGGGTCTTAATCCGGCATTTTTCTCGATG
CAAATCAAAACACAAGCCGATCTGCTATCAGCCTTAGATCGGATCAATTTGGAGCCATGGAAACTAGCCCTCTTG
GAGTGCTGCATTCAGCCCGGCGATGTCAGTGTTGGTCTACGGCAGCTTGCAGGTGCACTCTCTGAAACAGTCCAG
TGA
Transcript >Pro_DTO377G3_2|g1021.t1
ATGACTGAGCTATTTGACCGACCGAGCTTGATGCCACCATTGATCACCCCGAGCTTTTCACCCAAAGACCATAAT
ATCGGCACCCTCTTGGCCCATAGAATGGAAGAGCTGGGAGTTAAGGACTTCTTTGCCGTCCCAGGTGACTCAAAT
CTGACCCTGCTTGATCAGCTTTTGAAAAACCCAAGCCTACACCTTATTGGGTGCTGTAATGAGTTGAATGCTGGC
TACGCTGCAGATAGGTACGCGCGAAGTTCCCCTACCAAAGTTGCGGTTGTGATAGTCACCTTCACGGTTGGGAGC
CTATCACTGCTTAATACAATTGCAGGAGCCTATTCTGAGCGACTTAAGATCATAATTATCTCAGGCTGTCCAAGC
TCAAAATTGCTGACAGAGGGGAGTCTCCTCCATCATACGACAGGTAGAGCGAGCAAGGACCAAGCACTGCGTGTA
TTCCAAGAGTTCACGGCTACCTCAATCCGTCTGGATTCCAGTGAATATGCTGCACTCCGCCTAGATGAAGCTCTC
TCTCAGTGCATTCATAAATCACTGCCAGTCTACATTGAGATTCCCACCGATATAGTGGGGGTTGTGGGCAATGCA
GCAACTCCTTTGCAGATTTCACCGCCAACATTAATTCAATCAGAGGCCGTCGATGAAATTATATCCCCACTGATT
GCCACCTGGAATGCAGCGCACCGGCCGATTTTGATCATTGGTGCTCTGGCACGCTTCTTCCTCTCGACAGAAGCT
CTGATAGCATTTGCTGAAAAGCTGGGTTGCGCCGTCTTCTGCCAGCCGGATGCCAAATCAACGCTACCAGAGTCA
CACCCTCAGTTTGTGGGCACATTTTGGGCCATTGCTTCCAAGCCCGAATGTAGAGATATTGTGATGGACGCTGAC
CTCTGGGTGGTAGTTGGAGGCCGTTGGTCTGATTTGCACACGGTGGGAGGTCTCAATATCAAAGAGGAGCGCCGA
CGTATGATTAATATCCAGGAAACATCTATACGAATGCCGTATGGTCGATTGTTTCAAGATTTATGCCTAGCCAAT
GTTCTTGGCGCTTTTCTGCGGTCCTCAATTCTCCCCAAAAGAGAAACACTTCTTTCATCCCAATGGAAGTCGCGT
GAACAGACCAGAGTCAACAGTCCTGTACTTGGCGAAGCTCTCACAGTGCGTGGGATCGTGGATGTTATCCAACAG
CTAATTACAAGCAAAGACACCTTGATAGCTGATACGGGGGATGCTTGGTTCAATGCCGCCGATATTTCGCTCCCC
ATGGGGGCGAACTTTCAAATTCAGCTAGTTTATGCGTCTCTGGGATGGAGCCTACCTGCTGCGCTTGGCTGCCAA
CTAGCTCGCCCCGATGGGCGAACAATCCTCATGATTGGTGATGGCGCTTTTCAAATGACTGCTCAAGAGCTAAGT
ACTGCCATCCGAAGTAGAGCCAACATGATAGTCTTCATCTTCAACAATCTGGGTTATCAGATCGAGTCTGCAATT
CATGATGGACCGTATAATTACATCGCCAATTGGAACTATGCCAAATTCGCTTCCGCCATGTGTACACCCAAGCAT
ACAAGAACATGCAACGACCCGTTCGCATCTCAATTGGACAAAGACCGGGGTCTTAATCCGGCATTTTTCTCGATG
CAAATCAAAACACAAGCCGATCTGCTATCAGCCTTAGATCGGATCAATTTGGAGCCATGGAAACTAGCCCTCTTG
GAGTGCTGCATTCAGCCCGGCGATGTCAGTGTTGGTCTACGGCAGCTTGCAGGTGCACTCTCTGAAACAGTCCAG
TGA
Gene >Pro_DTO377G3_2|g1021.t1
ATGACTGAGCTATTTGACCGACCGAGCTTGATGCCACCATTGATCACCCCGAGCTTTTCACCCAAAGACCATAAT
ATCGGCACCCTCTTGGCCCATAGAATGGAAGAGCTGGGAGTTAAGGACTTCTTTGCCGTCCCAGGTACTTGCGCC
AAGATTCCATATGTTTCACACCATTCAAGCTTACTAACTACTATCATTGAAAGGTGACTCAAATCTGACCCTGCT
TGATCAGCTTTTGAAAAACCCAAGCCTACACCTTATTGGGTGCTGTAATGAGTTGAATGCTGGCTACGCTGCAGA
TAGGTACGCGCGAAGTTCCCCTACCAAAGTTGCGGTTGTGATAGTCACCTTCACGGTTGGGAGCCTATCACTGCT
TAATACAATTGCAGGAGCCTATTCTGAGCGACTTAAGATCATAATTATCTCAGGCTGTCCAAGCTCAAAATTGCT
GACAGAGGGGAGTCTCCTCCATCATACGACAGGTAGAGCGAGCAAGGACCAAGCACTGCGTGTATTCCAAGAGTT
CACGGCTACCTCAATCCGTCTGGATTCCAGTGAATATGCTGCACTCCGCCTAGATGAAGCTCTCTCTCAGTGCAT
TCATAAATCACTGCCAGTCTACATTGAGATTCCCACCGATATAGTGGGGGTTGTGGGCAATGCAGCAACTCCTTT
GCAGATTTCACCGCCAACATTAATTCAATCAGAGGCCGTCGATGAAATTATATCCCCACTGATTGCCACCTGGAA
TGCAGCGCACCGGCCGATTTTGATCATTGGTGCTCTGGCACGCTTCTTCCTCTCGACAGAAGCTCTGATAGCATT
TGCTGAAAAGCTGGGTTGCGCCGTCTTCTGCCAGCCGGATGCCAAATCAACGCTACCAGAGTCACACCCTCAGTT
TGTGGGCACATTTTGGGCCATTGCTTCCAAGCCCGAATGTAGAGATATTGTGATGGACGCTGACCTCTGGGTGGT
AGTTGGAGGCCGTTGGTCTGATTTGCACACGGTGGGAGGTCTCAATATCAAAGAGGAGCGCCGACGTATGATTAA
TATCCAGGAAACATCTATACGAATGCCGTATGGTCGATTGTTTCAAGATTTATGCCTAGCCAATGTTCTTGGCGC
TTTTCTGCGGTCCTCAATTCTCCCCAAAAGAGAAACACTTCTTTCATCCCAATGGAAGTCGCGTGAACAGACCAG
AGTCAACAGTCCTGTACTTGGCGAAGCTCTCACAGTGCGTGGGATCGTGGATGTTATCCAACAGCTAATTACAAG
CAAAGACACCTTGATAGCTGATACGGGGGATGCTTGGTTCAATGCCGCCGATATTTCGCTCCCCATGGGGGCGAA
CTTTCAAATTCAGCTAGTTTATGCGTCTCTGGGATGGAGCCTACCTGCTGCGCTTGGCTGCCAACTAGCTCGCCC
CGATGGGCGAACAATCCTCATGATTGGTGATGGCGCTTTTCAAATGACTGCTCAAGAGCTAAGTACTGCCATCCG
AAGTAGAGCCAACATGATAGTCTTCATCTTCAACAATCTGGGTTATCAGATCGAGGTAAGTTCTTACTGTTCATT
CTAAGGCCACATATCCTGCTTCAAGGTCCCTCTTTTTTCCTCTCCATCTTTGAATTAAGCAAGACTCCTTTGCTA
ATATTTTTCCATCCTCCTTGCCATATTCTAGTCTGCAATTCATGATGGACCGTATAATTACATCGCCAATTGGAA
CTATGCCAAATTCGCTTCCGCCATGTGTACACCCAAGCATACAAGAACATGCAACGACCCGTTCGCATCTCAATT
GGACAAAGACCGGGGTCTTAATCCGGCATTTTTCTCGATGCAAATCAAAACACAAGCCGATCTGCTATCAGCCTT
AGATCGGATCAATTTGGAGCCATGGAAACTAGCCCTCTTGGAGTGCTGCATTCAGCCCGGCGATGTCAGTGTTGG
TCTACGGCAGCTTGCAGGTGCACTCTCTGAAACAGTCCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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