Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1002.t1
Gene name
Locationscaffold_01:2667231..2667928
Strand+
Gene length (bp)697
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02845 CUE CUE domain 5.8E-09 49 88

GO

GO Term Description Terminal node
GO:0043130 ubiquitin binding Yes
GO:0005515 protein binding No
GO:0005488 binding No
GO:0032182 ubiquitin-like protein binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1002.t1
MTDEEPSLNIPSLLTLAVVSYFVLRWFFNRDESSAGGSRGRGRGNVVDPAQVEQIAQMFPQLNTRDIMWDLQRNG
GSVAATTERVLTGRGLETPPPSFQPPVAIPPTNIPLAQTATPVQKADAQDLISRYNLSAKAESPATESEPEKPSK
SSWSQNKEERQRILQKRRDDMILAARRKMMQKSQGNV*
Coding >Pro_DTO377G3_2|g1002.t1
ATGACGGACGAGGAGCCTTCGCTGAACATACCGTCGCTTCTCACTCTAGCGGTTGTATCATATTTTGTTCTCCGA
TGGTTTTTTAACCGCGATGAAAGCTCCGCGGGGGGAAGCCGAGGTAGGGGGCGTGGCAATGTCGTCGATCCGGCG
CAGGTGGAACAGATCGCGCAGATGTTCCCTCAACTGAACACTCGTGATATAATGTGGGATCTGCAGCGTAATGGC
GGCAGTGTCGCCGCAACGACAGAGAGAGTCCTGACTGGACGGGGGCTGGAAACGCCTCCTCCTTCGTTCCAACCT
CCGGTCGCAATTCCCCCCACCAATATCCCGCTGGCGCAGACCGCCACGCCCGTACAGAAAGCGGACGCACAGGAC
TTGATATCTCGGTATAATTTGAGTGCAAAGGCCGAGAGCCCTGCTACAGAGTCAGAACCCGAAAAGCCTTCCAAG
TCCTCTTGGTCCCAAAATAAGGAAGAGCGCCAGCGGATACTGCAAAAGCGGCGGGATGATATGATCTTGGCGGCG
CGAAGAAAGATGATGCAAAAGAGCCAGGGCAATGTATGA
Transcript >Pro_DTO377G3_2|g1002.t1
ATGACGGACGAGGAGCCTTCGCTGAACATACCGTCGCTTCTCACTCTAGCGGTTGTATCATATTTTGTTCTCCGA
TGGTTTTTTAACCGCGATGAAAGCTCCGCGGGGGGAAGCCGAGGTAGGGGGCGTGGCAATGTCGTCGATCCGGCG
CAGGTGGAACAGATCGCGCAGATGTTCCCTCAACTGAACACTCGTGATATAATGTGGGATCTGCAGCGTAATGGC
GGCAGTGTCGCCGCAACGACAGAGAGAGTCCTGACTGGACGGGGGCTGGAAACGCCTCCTCCTTCGTTCCAACCT
CCGGTCGCAATTCCCCCCACCAATATCCCGCTGGCGCAGACCGCCACGCCCGTACAGAAAGCGGACGCACAGGAC
TTGATATCTCGGTATAATTTGAGTGCAAAGGCCGAGAGCCCTGCTACAGAGTCAGAACCCGAAAAGCCTTCCAAG
TCCTCTTGGTCCCAAAATAAGGAAGAGCGCCAGCGGATACTGCAAAAGCGGCGGGATGATATGATCTTGGCGGCG
CGAAGAAAGATGATGCAAAAGAGCCAGGGCAATGTATGA
Gene >Pro_DTO377G3_2|g1002.t1
ATGACGGACGAGGAGCCTTCGCTGAACATACCGTCGCTTCTCACTCTAGCGGTTGTATCATATTTTGTTCTCCGA
TGGTTTTTTAACCGCGATGAAAGCTCCGCGGGGGGAAGCCGAGGTAGGGGGCGTGGCAATGTCGTCGATCCGGCG
CAGGTGGAACAGATCGCGCAGATGTTCCCTCAACTGAACACTCGTGATATAATGTGGGATCTGCAGCGTAATGGC
GGCAGTGTCGCCGCAACGACAGAGAGAGTCCTGACTGGACGGGGGCTGGAAACGGTACGTGTTGCGCTGATGCTG
TCATCGATTTCCCCACCTTATCTGCGTCTCAGACAACTCGACTCGGCCACAGGCTTCAAATATCAACTGCAAATA
GTCAGTTATCGAAGCATTGACTAATTCACTTTCTTAGCCTCCTCCTTCGTTCCAACCTCCGGTCGCAATTCCCCC
CACCAATATCCCGCTGGCGCAGACCGCCACGCCCGTACAGAAAGCGGACGCACAGGACTTGATATCTCGGTATAA
TTTGAGTGCAAAGGCCGAGAGCCCTGCTACAGAGTCAGAACCCGAAAAGCCTTCCAAGTCCTCTTGGTCCCAAAA
TAAGGAAGAGCGCCAGCGGATACTGCAAAAGCGGCGGGATGATATGATCTTGGCGGCGCGAAGAAAGATGATGCA
AAAGAGCCAGGGCAATGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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